RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YBT1P32386 1661 aa1.6□□□□□ -2.15
UBP16YPL072W TY3B-IQ7LHG5 1498 aaKnown RBP1.6□□□□□ -2.15
UBP16YPL072W KRE5P22023 1365 aa1.6□□□□□ -2.15
UBP16YPL072W TFC1P32367 649 aa1.6□□□□□ -2.15
UBP16YPL072W YJL027CP47063 138 aaPredicted RBP1.6□□□□□ -2.15
UBP16YPL072W MOG1P47123 218 aa1.6□□□□□ -2.15
UBP16YPL072W TTI2P47168 421 aa1.6□□□□□ -2.15
UBP16YPL072W SBH1P52870 82 aa1.6□□□□□ -2.15
UBP16YPL072W HSK3P69852 69 aa1.6□□□□□ -2.15
UBP16YPL072W VPS28Q02767 242 aa1.6□□□□□ -2.15
UBP16YPL072W YDL180WQ12301 547 aa1.6□□□□□ -2.15
UBP16YPL072W BOL1Q3E793 110 aa1.6□□□□□ -2.15
UBP16YPL072W SEC7P11075 2009 aaKnown RBP1.6□□□□□ -2.15
UBP16YPL072W RPO21P04050 1733 aaKnown RBP1.59□□□□□ -2.15
UBP16YPL072W GCN2P15442 1659 aa1.59□□□□□ -2.15
UBP16YPL072W YLR236CA0A023PZG4 107 aa1.59□□□□□ -2.16
UBP16YPL072W MDH2P22133 377 aa1.59□□□□□ -2.16
UBP16YPL072W VMA22P38784 181 aa1.59□□□□□ -2.16
UBP16YPL072W NSA2P40078 261 aaKnown RBP1.59□□□□□ -2.16
UBP16YPL072W GLR1P41921 483 aaKnown RBP1.59□□□□□ -2.16
UBP16YPL072W DAN1P47178 298 aa1.59□□□□□ -2.16
UBP16YPL072W YGL101WP53144 215 aa1.59□□□□□ -2.16
UBP16YPL072W YPR127WQ06494 345 aa1.59□□□□□ -2.16
UBP16YPL072W NAT3Q06504 195 aa1.59□□□□□ -2.16
UBP16YPL072W YOR214CQ12282 236 aa1.59□□□□□ -2.16
UBP16YPL072W NTE1Q04958 1679 aa1.58□□□□□ -2.16
UBP16YPL072W VMR1P38735 1592 aa1.58□□□□□ -2.16
UBP16YPL072W DDI2P0CH63 225 aa1.58□□□□□ -2.16
UBP16YPL072W DDI3P0CH64 225 aa1.58□□□□□ -2.16
UBP16YPL072W TIR1P10863 254 aa1.58□□□□□ -2.16
UBP16YPL072W PEX34P25584 144 aa1.58□□□□□ -2.16
UBP16YPL072W STP22P25604 385 aa1.58□□□□□ -2.16
UBP16YPL072W UBC8P28263 218 aa1.58□□□□□ -2.16
UBP16YPL072W GAA1P39012 614 aa1.58□□□□□ -2.16
UBP16YPL072W SPC25P40014 221 aa1.58□□□□□ -2.16
UBP16YPL072W CIN5P40917 295 aa1.58□□□□□ -2.16
UBP16YPL072W NQM1P53228 333 aaPredicted RBP1.58□□□□□ -2.16
UBP16YPL072W MPC3P53311 146 aa1.58□□□□□ -2.16
UBP16YPL072W BUD25P85052 153 aa1.58□□□□□ -2.16
UBP16YPL072W DIG2Q03373 323 aaKnown RBP1.58□□□□□ -2.16
UBP16YPL072W THI74Q04083 370 aa1.58□□□□□ -2.16
UBP16YPL072W SPC24Q04477 213 aa1.58□□□□□ -2.16
UBP16YPL072W YMR253CQ04835 414 aa1.58□□□□□ -2.16
UBP16YPL072W SML1Q04964 104 aa1.58□□□□□ -2.16
UBP16YPL072W RAD28Q12021 506 aa1.58□□□□□ -2.16
UBP16YPL072W EFG1Q3E705 233 aaKnown RBP1.58□□□□□ -2.16
UBP16YPL072W YRF1-1P0CX20 1796 aa1.58□□□□□ -2.16
UBP16YPL072W YRF1-5P0CX21 1796 aa1.58□□□□□ -2.16
UBP16YPL072W YRF1-8P0CX22 1796 aa1.58□□□□□ -2.16
UBP16YPL072W TRM3Q07527 1436 aa1.58□□□□□ -2.16
UBP16YPL072W RAS2P01120 322 aaKnown RBP1.57□□□□□ -2.16
UBP16YPL072W IDP1P21954 428 aaKnown RBP1.57□□□□□ -2.16
UBP16YPL072W YCR023CP25351 611 aa1.57□□□□□ -2.16
UBP16YPL072W HSP30P25619 332 aa1.57□□□□□ -2.16
UBP16YPL072W PAM17P36147 197 aa1.57□□□□□ -2.16
UBP16YPL072W NRG2P38082 220 aa1.57□□□□□ -2.16
UBP16YPL072W PEP8P40335 379 aa1.57□□□□□ -2.16
UBP16YPL072W YGL204CP53089 101 aa1.57□□□□□ -2.16
UBP16YPL072W LSM3P57743 89 aaKnown RBP1.57□□□□□ -2.16
UBP16YPL072W HHT1P61830 136 aa1.57□□□□□ -2.16
UBP16YPL072W YKR005CQ02203 525 aa1.57□□□□□ -2.16
UBP16YPL072W YPR174CQ06616 221 aaPredicted RBP1.57□□□□□ -2.16
UBP16YPL072W IRC23Q08416 157 aa1.57□□□□□ -2.16
UBP16YPL072W DAS2Q12084 232 aa1.57□□□□□ -2.16
UBP16YPL072W IML1P47170 1584 aa1.57□□□□□ -2.16
UBP16YPL072W BCK1Q01389 1478 aa1.57□□□□□ -2.16
UBP16YPL072W RAD6P06104 172 aa1.56□□□□□ -2.16
UBP16YPL072W PET54P10834 293 aa1.56□□□□□ -2.16
UBP16YPL072W UPS2P35200 230 aa1.56□□□□□ -2.16
UBP16YPL072W RIO2P40160 425 aaKnown RBP1.56□□□□□ -2.16
UBP16YPL072W SOL1P50278 321 aa1.56□□□□□ -2.16
UBP16YPL072W RAV2Q03956 351 aa1.56□□□□□ -2.16
UBP16YPL072W ANT1Q06497 328 aa1.56□□□□□ -2.16
UBP16YPL072W YPD1Q07688 167 aa1.56□□□□□ -2.16
UBP16YPL072W YLR046CQ12253 270 aa1.56□□□□□ -2.16
UBP16YPL072W YHR086W-AQ3E746 53 aa1.56□□□□□ -2.16
UBP16YPL072W UBI4P0CG63 381 aaKnown RBP1.56□□□□□ -2.16
UBP16YPL072W SEC11P15367 167 aa1.56□□□□□ -2.16
UBP16YPL072W CPR5P35176 225 aa1.56□□□□□ -2.16
UBP16YPL072W TMA19P35691 167 aaKnown RBP1.56□□□□□ -2.16
UBP16YPL072W SLM6P38343 150 aa1.56□□□□□ -2.16
UBP16YPL072W YER135CP40082 130 aa1.56□□□□□ -2.16
UBP16YPL072W DLS1P40366 167 aa1.56□□□□□ -2.16
UBP16YPL072W APQ12P40532 138 aa1.56□□□□□ -2.16
UBP16YPL072W KNH1P50112 268 aa1.56□□□□□ -2.16
UBP16YPL072W PKR1Q03880 122 aaKnown RBP1.56□□□□□ -2.16
UBP16YPL072W YDR391CQ04170 232 aa1.56□□□□□ -2.16
UBP16YPL072W GAL83Q04739 417 aa1.56□□□□□ -2.16
UBP16YPL072W YPR202WQ08993 238 aa1.56□□□□□ -2.16
UBP16YPL072W RPO41P13433 1351 aaKnown RBP1.55□□□□□ -2.16
UBP16YPL072W YOR093CQ12275 1648 aa1.55□□□□□ -2.16
UBP16YPL072W DNF2Q12675 1612 aa1.55□□□□□ -2.16
UBP16YPL072W RPL2AP0CX45 254 aaKnown RBP1.55□□□□□ -2.16
UBP16YPL072W RPL2BP0CX46 254 aaKnown RBP1.55□□□□□ -2.16
UBP16YPL072W CYC2P38909 366 aa1.55□□□□□ -2.16
UBP16YPL072W YPL073CP40323 161 aa1.55□□□□□ -2.16
UBP16YPL072W PHB1P40961 287 aa1.55□□□□□ -2.16
UBP16YPL072W YFR054CP43622 192 aa1.55□□□□□ -2.16
UBP16YPL072W RCF2P53721 224 aa1.55□□□□□ -2.16
UBP16YPL072W YNL033WP53964 284 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms