RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C MRPL6P32904 214 aa3.22□□□□□ -1.89
SNF8YPL002C YRA2P36036 203 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SNF8YPL002C SHE2P36068 246 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SNF8YPL002C YKL075CP36083 450 aa3.22□□□□□ -1.89
SNF8YPL002C IPT1P38954 527 aa3.22□□□□□ -1.89
SNF8YPL002C YPI1P43587 155 aa3.22□□□□□ -1.89
SNF8YPL002C OST3P48439 350 aa3.22□□□□□ -1.89
SNF8YPL002C COS10P52924 374 aa3.22□□□□□ -1.89
SNF8YPL002C YNL184CP53876 108 aa3.22□□□□□ -1.89
SNF8YPL002C PGA1P53896 198 aa3.22□□□□□ -1.89
SNF8YPL002C AAH1P53909 347 aa3.22□□□□□ -1.89
SNF8YPL002C ODC1Q03028 310 aa3.22□□□□□ -1.89
SNF8YPL002C TSA2Q04120 196 aa3.22□□□□□ -1.89
SNF8YPL002C GAL83Q04739 417 aa3.22□□□□□ -1.89
SNF8YPL002C ARC18Q05933 178 aaKnown RBP3.22□□□□□ -1.89
SNF8YPL002C FUN19P28003 413 aaPredicted RBP3.21□□□□□ -1.9
SNF8YPL002C NTF2P33331 125 aaKnown RBP3.21□□□□□ -1.9
SNF8YPL002C RCN1P36054 211 aa3.21□□□□□ -1.9
SNF8YPL002C SWD2P36104 329 aaPredicted RBP3.21□□□□□ -1.9
SNF8YPL002C MRPL3P36516 390 aa3.21□□□□□ -1.9
SNF8YPL002C SLM6P38343 150 aa3.21□□□□□ -1.9
SNF8YPL002C DOG2P38773 246 aa3.21□□□□□ -1.9
SNF8YPL002C DLS1P40366 167 aa3.21□□□□□ -1.9
SNF8YPL002C YJL213WP40896 331 aa3.21□□□□□ -1.9
SNF8YPL002C NSE4P43124 402 aa3.21□□□□□ -1.9
SNF8YPL002C TTI2P47168 421 aa3.21□□□□□ -1.9
SNF8YPL002C YIP1P53039 248 aa3.21□□□□□ -1.9
SNF8YPL002C PRM8P53174 237 aa3.21□□□□□ -1.9
SNF8YPL002C ALG13P53178 202 aa3.21□□□□□ -1.9
SNF8YPL002C YLR152CP54072 576 aa3.21□□□□□ -1.9
SNF8YPL002C SPR6Q01684 191 aa3.21□□□□□ -1.9
SNF8YPL002C YMR320WQ04897 101 aa3.21□□□□□ -1.9
SNF8YPL002C CTR3Q06686 241 aa3.21□□□□□ -1.9
SNF8YPL002C SCP1Q08873 200 aa3.21□□□□□ -1.9
SNF8YPL002C RFM1Q12192 310 aa3.21□□□□□ -1.9
SNF8YPL002C YLR126CQ12288 251 aa3.21□□□□□ -1.9
SNF8YPL002C EAF3Q12432 401 aa3.21□□□□□ -1.9
SNF8YPL002C YLR099W-AQ3E798 87 aa3.21□□□□□ -1.9
SNF8YPL002C VAR1P02381 398 aa3.2□□□□□ -1.9
SNF8YPL002C ADK1P07170 222 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C PBI2P0CT04 75 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C MRPL28P36527 147 aa3.2□□□□□ -1.9
SNF8YPL002C GLE2P40066 365 aa3.2□□□□□ -1.9
SNF8YPL002C RPR2P40571 144 aa3.2□□□□□ -1.9
SNF8YPL002C CAB4P53332 305 aa3.2□□□□□ -1.9
SNF8YPL002C DAD3P69850 94 aa3.2□□□□□ -1.9
SNF8YPL002C YCL001W-AP87012 153 aa3.2□□□□□ -1.9
SNF8YPL002C RPL21AQ02753 160 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C MRX11Q03079 207 aa3.2□□□□□ -1.9
SNF8YPL002C TDA1Q03533 586 aa3.2□□□□□ -1.9
SNF8YPL002C VBA1Q04301 562 aa3.2□□□□□ -1.9
SNF8YPL002C ELP6Q04868 273 aa3.2□□□□□ -1.9
SNF8YPL002C HOR7Q05827 59 aa3.2□□□□□ -1.9
SNF8YPL002C SNX3Q08826 162 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C FCY1Q12178 158 aa3.2□□□□□ -1.9
SNF8YPL002C DGK1Q12382 290 aa3.2□□□□□ -1.9
SNF8YPL002C PCL9Q12477 304 aa3.2□□□□□ -1.9
SNF8YPL002C PRM4Q12498 284 aa3.2□□□□□ -1.9
SNF8YPL002C RPL21BQ12672 160 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C YDL085C-AQ3E7B7 68 aaKnown RBP3.2□□□□□ -1.9
SNF8YPL002C MRPL44P19956 98 aa3.19□□□□□ -1.9
SNF8YPL002C MAG1P22134 296 aaKnown RBP3.19□□□□□ -1.9
SNF8YPL002C CDC50P25656 391 aa3.19□□□□□ -1.9
SNF8YPL002C IMP1P28627 190 aa3.19□□□□□ -1.9
SNF8YPL002C APE2P32454 952 aaKnown RBP3.19□□□□□ -1.9
SNF8YPL002C SPS18P32572 300 aa3.19□□□□□ -1.9
SNF8YPL002C KTI12P34253 313 aaKnown RBP3.19□□□□□ -1.9
SNF8YPL002C PMU1P36069 295 aa3.19□□□□□ -1.9
SNF8YPL002C SMB1P40018 196 aaKnown RBP3.19□□□□□ -1.9
SNF8YPL002C AVT6P40074 448 aa3.19□□□□□ -1.9
SNF8YPL002C DOC1P53068 250 aa3.19□□□□□ -1.9
SNF8YPL002C SAY1P53324 424 aa3.19□□□□□ -1.9
SNF8YPL002C PDR17P53844 350 aa3.19□□□□□ -1.9
SNF8YPL002C HSK3P69852 69 aa3.19□□□□□ -1.9
SNF8YPL002C TVP18Q04767 167 aa3.19□□□□□ -1.9
SNF8YPL002C UPS1Q05776 175 aa3.19□□□□□ -1.9
SNF8YPL002C MCH1Q07376 486 aa3.19□□□□□ -1.9
SNF8YPL002C HEM25Q07534 307 aa3.19□□□□□ -1.9
SNF8YPL002C FEX1Q08913 375 aa3.19□□□□□ -1.9
SNF8YPL002C PRM3Q08931 133 aa3.19□□□□□ -1.9
SNF8YPL002C ERV2Q12284 196 aa3.19□□□□□ -1.9
SNF8YPL002C RPL12AP0CX53 165 aaKnown RBP3.18□□□□□ -1.9
SNF8YPL002C RPL12BP0CX54 165 aa3.18□□□□□ -1.9
SNF8YPL002C PEX4P29340 183 aa3.18□□□□□ -1.9
SNF8YPL002C SFK1P35735 353 aa3.18□□□□□ -1.9
SNF8YPL002C SDH4P37298 181 aa3.18□□□□□ -1.9
SNF8YPL002C ECM33P38248 429 aaKnown RBP3.18□□□□□ -1.9
SNF8YPL002C HAC1P41546 238 aa3.18□□□□□ -1.9
SNF8YPL002C YJR015WP47090 510 aa3.18□□□□□ -1.9
SNF8YPL002C VPS55P47111 140 aa3.18□□□□□ -1.9
SNF8YPL002C CPD1P53314 239 aa3.18□□□□□ -1.9
SNF8YPL002C COF1Q03048 143 aaKnown RBP3.18□□□□□ -1.9
SNF8YPL002C PBP4Q07362 185 aaKnown RBP3.18□□□□□ -1.9
SNF8YPL002C YPR063CQ12160 140 aa3.18□□□□□ -1.9
SNF8YPL002C JID1Q12350 301 aa3.18□□□□□ -1.9
SNF8YPL002C OAC1P32332 324 aa3.17□□□□□ -1.9
SNF8YPL002C SCM4P32564 187 aa3.17□□□□□ -1.9
SNF8YPL002C PDX3P38075 228 aaKnown RBP3.17□□□□□ -1.9
SNF8YPL002C YEA6P39953 335 aa3.17□□□□□ -1.9
SNF8YPL002C YJR012CP47087 207 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms