RNA–Protein interactions for RNA: YOR291W

YPK9, Transcript of Vacuolar protein with a possible role in sequestering heavy metals, yeast

Gene YPK9, Length 4,419 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK9	YOR291W	SUR7	P54003	302 aa		3.59	□□□□□ -1.84
YPK9	YOR291W	YPR203W	Q08994	102 aa		3.59	□□□□□ -1.84
YPK9	YOR291W	ATG40	Q99325	256 aa		3.59	□□□□□ -1.84
YPK9	YOR291W	RPB8	P20436	146 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	AHT1	P29589	182 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	NUD1	P32336	851 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	DUT1	P33317	147 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	ROT1	Q03691	256 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	MIM1	Q08176	113 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	VPS68	Q12016	184 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YLR111W	Q12528	110 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YLR358C	O13565	187 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	SPC29	P33419	253 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	ECM14	P38836	430 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YAL037W	P39728	267 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YIL169C	P40442	995 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	TPC1	P53257	314 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	RPL34A	P87262	121 aa	Predicted RBP	3.58	□□□□□ -1.84
YPK9	YOR291W	HUG1	Q6Q5K6	68 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	SAS2	P40963	338 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YNR040W	P53736	256 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	RLM1	Q12224	676 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	MST28	P39552	234 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	CUP9	P41817	306 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	POP3	P53833	195 aa	Predicted RBP	3.58	□□□□□ -1.84
YPK9	YOR291W	HPA2	Q06592	156 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	PRM3	Q08931	133 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	YPL264C	Q08980	353 aa		3.58	□□□□□ -1.84
YPK9	YOR291W	MDM10	P18409	493 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	CDC43	P18898	376 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	YBL059W	P34224	193 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	CMC1	P36064	111 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	MCH4	Q08268	501 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	USB1	Q12208	290 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	MPD1	Q12404	318 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	YDR157W	A0A023PZE8	133 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	RPL12A	P0CX53	165 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	RPL12B	P0CX54	165 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	ARF1	P11076	181 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	RPL30	P14120	105 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	ANS1	P38832	159 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	YER181C	P40097	107 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	RPL34B	P40525	121 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	BUD8	P41698	603 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	SHR5	P41912	237 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	YLR460C	P54007	376 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	LPP1	Q04396	274 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	MCH2	P36032	473 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	NTC20	P38302	140 aa	Predicted RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	TVP23	P38962	199 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	YFR045W	P43617	309 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	DUO1	P53168	247 aa	Known RBP	3.57	□□□□□ -1.84
YPK9	YOR291W	YGR039W	P53225	103 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	OPI10	Q08202	246 aa		3.57	□□□□□ -1.84
YPK9	YOR291W	YSF3	P0C074	85 aa	Predicted RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	RPL23A	P0CX41	137 aa	Known RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	RPL23B	P0CX42	137 aa	Known RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	HEM13	P11353	328 aa	Known RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	MSN1	P22148	382 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	YCR025C	P25352	136 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	TOA2	P32774	122 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	MRPL24	P36525	258 aa	Predicted RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	PAU7	P39545	55 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	HNT2	P49775	206 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	CRH1	P53301	507 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	YLR365W	Q7LIF2	110 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	OXA1	P39952	402 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	MID1	P41821	548 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	UBC13	P52490	153 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	MED6	P38782	295 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	YFR020W	P43600	232 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	ABF2	Q02486	183 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	YDR102C	Q03864	110 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	POM34	Q12445	299 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	LYS1	P38998	373 aa	RIP-Chip data	3.56	□□□□□ -1.84	not detected
YPK9	YOR291W	OST2	P46964	130 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	VPS71	Q03433	280 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	RPC11	Q04307	110 aa	Predicted RBP	3.56	□□□□□ -1.84
YPK9	YOR291W	FIT3	Q08907	204 aa		3.56	□□□□□ -1.84
YPK9	YOR291W	OPI3	P05375	206 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	CCS1	P40202	249 aa	Known RBP	3.55	□□□□□ -1.84
YPK9	YOR291W	YFL054C	P43549	646 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	NCE101	Q02820	53 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	YAL064W-B	O13512	126 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	ATF1	P40353	525 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	YJR115W	P47152	169 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	ECM18	Q04623	453 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	SRP21	P32342	167 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	RPP1	P38786	293 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	YJL213W	P40896	331 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	MPP6	P53725	186 aa	Predicted RBP	3.55	□□□□□ -1.84
YPK9	YOR291W	YHM2	Q04013	314 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	YPR108W-A	Q3E7B3	70 aa		3.55	□□□□□ -1.84
YPK9	YOR291W	YMR254C	Q04838	102 aa		3.54	□□□□□ -1.84
YPK9	YOR291W	GAR1	P28007	205 aa	Known RBP	3.54	□□□□□ -1.84
YPK9	YOR291W	UBS1	P38290	277 aa		3.54	□□□□□ -1.84
YPK9	YOR291W	MST27	P53176	234 aa		3.54	□□□□□ -1.84
YPK9	YOR291W	YNR014W	P53719	212 aa		3.54	□□□□□ -1.84
YPK9	YOR291W	YOR292C	Q08743	309 aa		3.54	□□□□□ -1.84
YPK9	YOR291W	YPT10	P38146	199 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms