RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C HFA1P32874 2273 aa6.23□□□□□ -1.41
RUP1YOR138C YMR31P19955 123 aa6.23□□□□□ -1.41
RUP1YOR138C SOH1P38633 127 aa6.23□□□□□ -1.41
RUP1YOR138C GON7P46984 123 aa6.23□□□□□ -1.41
RUP1YOR138C RPL9BP51401 191 aaKnown RBP6.23□□□□□ -1.41
RUP1YOR138C DUG3P53871 357 aa6.23□□□□□ -1.41
RUP1YOR138C YCR024C-BQ3E7Z8 88 aa6.23□□□□□ -1.41
RUP1YOR138C PSD1P39006 500 aa6.22□□□□□ -1.41
RUP1YOR138C SEC24P40482 926 aaKnown RBP6.22□□□□□ -1.41
RUP1YOR138C SIP18P50263 79 aa6.22□□□□□ -1.41
RUP1YOR138C SRP21P32342 167 aa6.21□□□□□ -1.41
RUP1YOR138C RAD23P32628 398 aaKnown RBP6.21□□□□□ -1.41
RUP1YOR138C MCH1Q07376 486 aa6.21□□□□□ -1.41
RUP1YOR138C TPT1Q12272 230 aaKnown RBP6.21□□□□□ -1.41
RUP1YOR138C HAP3P13434 144 aa6.21□□□□□ -1.42
RUP1YOR138C MIG1P27705 504 aa6.21□□□□□ -1.42
RUP1YOR138C NNK1P36003 928 aa6.21□□□□□ -1.42
RUP1YOR138C DOG1P38774 246 aa6.21□□□□□ -1.42
RUP1YOR138C HUA1P40325 198 aa6.21□□□□□ -1.42
RUP1YOR138C RPL31AP0C2H8 113 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C RPL31BP0C2H9 113 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C VMA16P23968 213 aa6.2□□□□□ -1.42
RUP1YOR138C RPA43P46669 326 aa6.2□□□□□ -1.42
RUP1YOR138C TDA4P47153 279 aa6.2□□□□□ -1.42
RUP1YOR138C CPD1P53314 239 aa6.2□□□□□ -1.42
RUP1YOR138C CWC27Q02770 301 aa6.2□□□□□ -1.42
RUP1YOR138C HSP12P22943 109 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C TOM40P23644 387 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C PAU16P35994 123 aa6.2□□□□□ -1.42
RUP1YOR138C PRE5P40302 234 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C YJL028WP47062 111 aa6.2□□□□□ -1.42
RUP1YOR138C YMR166CQ03829 368 aa6.2□□□□□ -1.42
RUP1YOR138C CSM4Q08955 156 aa6.2□□□□□ -1.42
RUP1YOR138C RPS22BQ3E7Y3 130 aaKnown RBP6.2□□□□□ -1.42
RUP1YOR138C NUM1Q00402 2748 aa6.19□□□□□ -1.42
RUP1YOR138C SEC4P07560 215 aaKnown RBP6.19□□□□□ -1.42
RUP1YOR138C NOP1P15646 327 aaKnown RBP6.19□□□□□ -1.42
RUP1YOR138C QRI5P32344 111 aa6.19□□□□□ -1.42
RUP1YOR138C YKL187CP34231 750 aa6.19□□□□□ -1.42
RUP1YOR138C TEM1P38987 245 aa6.19□□□□□ -1.42
RUP1YOR138C TRI1Q05024 226 aa6.19□□□□□ -1.42
RUP1YOR138C FOL3Q12676 427 aaPredicted RBP6.19□□□□□ -1.42
RUP1YOR138C FMP27Q06179 2628 aa6.19□□□□□ -1.42
RUP1YOR138C PIS1P06197 220 aaKnown RBP6.18□□□□□ -1.42
RUP1YOR138C RPS26AP39938 119 aaKnown RBP6.18□□□□□ -1.42
RUP1YOR138C RPS26BP39939 119 aaKnown RBP6.18□□□□□ -1.42
RUP1YOR138C RAV2Q03956 351 aa6.18□□□□□ -1.42
RUP1YOR138C GAR1P28007 205 aaKnown RBP6.18□□□□□ -1.42
RUP1YOR138C YOX1P34161 385 aa6.18□□□□□ -1.42
RUP1YOR138C YGP1P38616 354 aaKnown RBP6.18□□□□□ -1.42
RUP1YOR138C SAS2P40963 338 aa6.18□□□□□ -1.42
RUP1YOR138C API2Q04413 109 aa6.18□□□□□ -1.42
RUP1YOR138C RPB10P22139 70 aa6.17□□□□□ -1.42
RUP1YOR138C ZRT1P32804 376 aa6.17□□□□□ -1.42
RUP1YOR138C GSP1P32835 219 aaKnown RBP6.17□□□□□ -1.42
RUP1YOR138C GSP2P32836 220 aaKnown RBP6.17□□□□□ -1.42
RUP1YOR138C YHR173CP38864 112 aa6.17□□□□□ -1.42
RUP1YOR138C PIR5P46999 287 aa6.17□□□□□ -1.42
RUP1YOR138C SDS23P53172 527 aa6.17□□□□□ -1.42
RUP1YOR138C TOM7P53507 60 aa6.17□□□□□ -1.42
RUP1YOR138C YNR071CP53757 342 aa6.17□□□□□ -1.42
RUP1YOR138C MSC3Q05812 728 aa6.17□□□□□ -1.42
RUP1YOR138C WIP1Q2V2P8 89 aa6.17□□□□□ -1.42
RUP1YOR138C SCS22Q6Q595 175 aa6.17□□□□□ -1.42
RUP1YOR138C CSF1Q12150 2958 aa6.17□□□□□ -1.42
RUP1YOR138C HMRA1P0CY11 126 aa6.16□□□□□ -1.42
RUP1YOR138C CNL1Q06333 122 aa6.16□□□□□ -1.42
RUP1YOR138C NDE2Q07500 545 aa6.16□□□□□ -1.42
RUP1YOR138C YDL157CQ12082 118 aa6.16□□□□□ -1.42
RUP1YOR138C RKI1Q12189 258 aa6.16□□□□□ -1.42
RUP1YOR138C YER190C-BP0CX94 160 aa6.16□□□□□ -1.42
RUP1YOR138C YEL077W-AP0CX95 160 aa6.16□□□□□ -1.42
RUP1YOR138C YGR296C-BP0CX96 160 aa6.16□□□□□ -1.42
RUP1YOR138C YPL283W-BP0CX97 160 aa6.16□□□□□ -1.42
RUP1YOR138C YPR204C-AP0CX98 160 aa6.16□□□□□ -1.42
RUP1YOR138C YKL102CP34249 101 aa6.16□□□□□ -1.42
RUP1YOR138C SEC72P39742 193 aaKnown RBP6.16□□□□□ -1.42
RUP1YOR138C FIT2Q08906 153 aa6.16□□□□□ -1.42
RUP1YOR138C YIL002W-AQ3E7Z5 69 aa6.16□□□□□ -1.42
RUP1YOR138C HTB1P02293 131 aaKnown RBP6.15□□□□□ -1.42
RUP1YOR138C RPL39P04650 51 aa6.15□□□□□ -1.42
RUP1YOR138C HEM4P06174 275 aa6.15□□□□□ -1.42
RUP1YOR138C YAR068WP39564 161 aa6.15□□□□□ -1.42
RUP1YOR138C SSU72P53538 206 aaPredicted RBP6.15□□□□□ -1.42
RUP1YOR138C PAU23Q07987 124 aa6.15□□□□□ -1.42
RUP1YOR138C PAU17Q12370 124 aa6.15□□□□□ -1.42
RUP1YOR138C TOR2P32600 2474 aaKnown RBP6.15□□□□□ -1.43
RUP1YOR138C PMU1P36069 295 aa6.15□□□□□ -1.43
RUP1YOR138C SAP30P38429 201 aa6.15□□□□□ -1.43
RUP1YOR138C YFL015CP43578 164 aa6.15□□□□□ -1.43
RUP1YOR138C BNA2P47125 453 aa6.15□□□□□ -1.43
RUP1YOR138C YDL183CP48569 320 aa6.15□□□□□ -1.43
RUP1YOR138C COX18P53239 316 aa6.15□□□□□ -1.43
RUP1YOR138C YDR366CP87287 132 aa6.15□□□□□ -1.43
RUP1YOR138C GIM5Q04493 163 aa6.15□□□□□ -1.43
RUP1YOR138C TVP18Q04767 167 aa6.15□□□□□ -1.43
RUP1YOR138C YTH1Q06102 208 aaPredicted RBP6.15□□□□□ -1.43
RUP1YOR138C ATP19P81451 68 aa6.14□□□□□ -1.43
RUP1YOR138C YOR029WQ12243 111 aa6.14□□□□□ -1.43
RUP1YOR138C UTR5P32630 166 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 222.5 ms