RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	GZF3	P42944	551 aa	Known RBP	4.93	□□□□□ -1.62
WHI2	YOR043W	DAN1	P47178	298 aa		4.93	□□□□□ -1.62
WHI2	YOR043W	YGR026W	P53217	278 aa		4.93	□□□□□ -1.62
WHI2	YOR043W	MCH1	Q07376	486 aa		4.93	□□□□□ -1.62
WHI2	YOR043W	ATP16	Q12165	160 aa		4.93	□□□□□ -1.62
WHI2	YOR043W	PAA1	Q12447	191 aa	Known RBP	4.93	□□□□□ -1.62
WHI2	YOR043W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
WHI2	YOR043W	RPB3	P16370	318 aa	Known RBP	4.92	□□□□□ -1.62
WHI2	YOR043W	FPR2	P32472	135 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	RAD23	P32628	398 aa	Known RBP	4.92	□□□□□ -1.62
WHI2	YOR043W	VMA11	P32842	164 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	RPS0A	P32905	252 aa	Known RBP	4.92	□□□□□ -1.62
WHI2	YOR043W	TRS20	P38334	175 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	GTT1	P40582	234 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	YJL213W	P40896	331 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	GEP5	Q12393	293 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	Q0297	Q9ZZV8	51 aa		4.92	□□□□□ -1.62
WHI2	YOR043W	PHO85	P17157	305 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	RPS2	P25443	254 aa	Known RBP	4.91	□□□□□ -1.62
WHI2	YOR043W	POF1	P25576	258 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	POP5	P28005	173 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	SDH4	P37298	181 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	MRPS9	P38120	278 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	YBL071C	P38185	102 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	IMD2	P38697	523 aa	Known RBP	4.91	□□□□□ -1.62
WHI2	YOR043W	YAR068W	P39564	161 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	DSK2	P48510	373 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	LST7	P53237	242 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	LDS2	Q08218	356 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	RAD28	Q12021	506 aa		4.91	□□□□□ -1.62
WHI2	YOR043W	PET494	P07390	489 aa	Predicted RBP	4.9	□□□□□ -1.62
WHI2	YOR043W	HMX1	P32339	317 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	CSH1	P38287	376 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	BDH1	P39714	382 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	PAU15	P40585	124 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	SAS2	P40963	338 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	HIT1	P46973	164 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	ATG27	P46989	271 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	ABM1	P47146	123 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	DAD3	P69850	94 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	TMA10	Q06177	86 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	LOA1	Q06508	300 aa		4.9	□□□□□ -1.62
WHI2	YOR043W	ILV5	P06168	395 aa	Known RBP	4.89	□□□□□ -1.63
WHI2	YOR043W	RPS22A	P0C0W1	130 aa	Known RBP	4.89	□□□□□ -1.63
WHI2	YOR043W	YCR022C	P25620	114 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	AFR1	P33304	620 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	AVT5	P38176	459 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	YFL054C	P43549	646 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	YJL163C	P46996	555 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	MGA1	P53050	456 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	YGR018C	P53211	109 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	RKI1	Q12189	258 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	YLR118C	Q12354	227 aa		4.89	□□□□□ -1.63
WHI2	YOR043W	URA2	P07259	2214 aa	Known RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	RNA15	P25299	296 aa	Predicted RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	PHD1	P36093	366 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	YBR013C	P38215	129 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	DOG2	P38773	246 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	DOG1	P38774	246 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	BNA1	P47096	177 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	FYV6	P53913	173 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	YMR317W	Q04893	1140 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	RXT3	Q07458	294 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	SNU23	Q12368	194 aa	Predicted RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	FMP49	A0A023PZB3	126 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	CDC7	P06243	507 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	HSP12	P22943	109 aa	Known RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	MRPL38	P35996	138 aa	Predicted RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	CDS1	P38221	457 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	HSP10	P38910	106 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	YIL163C	P40448	117 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	WWM1	P43582	211 aa	Known RBP	4.88	□□□□□ -1.63
WHI2	YOR043W	NCE103	P53615	221 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	NAT3	Q06504	195 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	IRC23	Q08416	157 aa		4.88	□□□□□ -1.63
WHI2	YOR043W	YPS1	P32329	569 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	NNK1	P36003	928 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	SFT2	P38166	215 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	RRT1	P38192	103 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	CYB5	P40312	120 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	YMR166C	Q03829	368 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	SDH7	Q04401	133 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	YOR352W	Q08816	343 aa		4.87	□□□□□ -1.63
WHI2	YOR043W	NHP6A	P11632	93 aa	Known RBP	4.86	□□□□□ -1.63
WHI2	YOR043W	LSM2	P38203	95 aa	Known RBP	4.86	□□□□□ -1.63
WHI2	YOR043W	GPP2	P40106	250 aa	Known RBP	4.86	□□□□□ -1.63
WHI2	YOR043W	GPI2	P46961	280 aa		4.86	□□□□□ -1.63
WHI2	YOR043W	YNR071C	P53757	342 aa		4.86	□□□□□ -1.63
WHI2	YOR043W	STP4	Q07351	490 aa		4.86	□□□□□ -1.63
WHI2	YOR043W	FIT2	Q08906	153 aa		4.86	□□□□□ -1.63
WHI2	YOR043W	YOP1	Q12402	180 aa		4.86	□□□□□ -1.63
WHI2	YOR043W	YNK1	P36010	153 aa	Known RBP	4.85	□□□□□ -1.63
WHI2	YOR043W	YHR173C	P38864	112 aa		4.85	□□□□□ -1.63
WHI2	YOR043W	GET2	P40056	285 aa		4.85	□□□□□ -1.63
WHI2	YOR043W	HUA1	P40325	198 aa		4.85	□□□□□ -1.63
WHI2	YOR043W	HST4	P53688	370 aa		4.85	□□□□□ -1.63
WHI2	YOR043W	SWT21	P53873	357 aa	Predicted RBP	4.85	□□□□□ -1.63
WHI2	YOR043W	APS2	Q00381	147 aa		4.85	□□□□□ -1.63
WHI2	YOR043W	PBP4	Q07362	185 aa	Known RBP	4.85	□□□□□ -1.63
WHI2	YOR043W	AYT1	Q12226	474 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms