RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	AYT1	Q12226	474 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	SFT2	P38166	215 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	YBR292C	P38357	123 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	MST28	P39552	234 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	SAS2	P40963	338 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	MST27	P53176	234 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	ATG39	Q06159	398 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	GNP1	P48813	663 aa		7.35	□□□□□ -1.23
MSB4	YOL112W	RIB4	P50861	169 aa	Predicted RBP	7.35	□□□□□ -1.23
MSB4	YOL112W	OCA2	P53949	197 aa		7.35	□□□□□ -1.23
MSB4	YOL112W	ERV25	P54837	211 aa	Known RBP	7.35	□□□□□ -1.23
MSB4	YOL112W	YCL001W-A	P87012	153 aa		7.35	□□□□□ -1.23
MSB4	YOL112W	COX19	Q3E731	98 aa		7.35	□□□□□ -1.23
MSB4	YOL112W	YBR085C-A	O43137	85 aa		7.34	□□□□□ -1.23
MSB4	YOL112W	RPP1A	P05318	106 aa	Predicted RBP	7.34	□□□□□ -1.23
MSB4	YOL112W	MRP2	P10663	115 aa	Predicted RBP	7.34	□□□□□ -1.23
MSB4	YOL112W	DSK2	P48510	373 aa		7.34	□□□□□ -1.23
MSB4	YOL112W	LDS2	Q08218	356 aa		7.34	□□□□□ -1.23
MSB4	YOL112W	MDM10	P18409	493 aa		7.33	□□□□□ -1.24
MSB4	YOL112W	VMA7	P39111	118 aa		7.33	□□□□□ -1.24
MSB4	YOL112W	SNX4	P47057	423 aa		7.33	□□□□□ -1.24
MSB4	YOL112W	YGR025W	P53216	100 aa		7.33	□□□□□ -1.24
MSB4	YOL112W	ORM1	P53224	222 aa		7.33	□□□□□ -1.24
MSB4	YOL112W	RPS2	P25443	254 aa	Known RBP	7.32	□□□□□ -1.24
MSB4	YOL112W	SPC25	P40014	221 aa		7.32	□□□□□ -1.24
MSB4	YOL112W	YNR071C	P53757	342 aa		7.32	□□□□□ -1.24
MSB4	YOL112W	LRS4	Q04087	347 aa	Known RBP	7.32	□□□□□ -1.24
MSB4	YOL112W	ATP14	Q12349	124 aa		7.32	□□□□□ -1.24
MSB4	YOL112W	ZRC1	P20107	442 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	RPL14A	P36105	138 aa	Known RBP	7.31	□□□□□ -1.24
MSB4	YOL112W	ECM33	P38248	429 aa	Known RBP	7.31	□□□□□ -1.24
MSB4	YOL112W	RPL14B	P38754	138 aa	Known RBP	7.31	□□□□□ -1.24
MSB4	YOL112W	SNF11	P38956	169 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	SIM1	P40472	476 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	LCB3	P47013	409 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	ATC1	Q04005	294 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	GRH1	Q04410	372 aa	Known RBP	7.31	□□□□□ -1.24
MSB4	YOL112W	YLR122C	Q12312	125 aa		7.31	□□□□□ -1.24
MSB4	YOL112W	TRS20	P38334	175 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	MPC2	P38857	129 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	AIM24	P47127	394 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	UBC12	P52491	188 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	CAF40	P53829	373 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	FMP41	P53889	259 aa	Known RBP	7.3	□□□□□ -1.24
MSB4	YOL112W	TMA23	Q03525	211 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	SDO1	Q07953	250 aa	Known RBP	7.3	□□□□□ -1.24
MSB4	YOL112W	ERS1	P17261	260 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	RPS0A	P32905	252 aa	Known RBP	7.3	□□□□□ -1.24
MSB4	YOL112W	TIR2	P33890	251 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	YIL077C	P40508	320 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	SMD3	P43321	101 aa	Known RBP	7.3	□□□□□ -1.24
MSB4	YOL112W	HAM1	P47119	197 aa	Known RBP	7.3	□□□□□ -1.24
MSB4	YOL112W	SNN1	P48232	102 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	RRG8	Q06109	277 aa		7.3	□□□□□ -1.24
MSB4	YOL112W	CMC1	P36064	111 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	LOC1	P43586	204 aa	Predicted RBP	7.29	□□□□□ -1.24
MSB4	YOL112W	TDA4	P47153	279 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	COX18	P53239	316 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	UBC7	Q02159	165 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	TRI1	Q05024	226 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	FIT2	Q08906	153 aa		7.29	□□□□□ -1.24
MSB4	YOL112W	SME1	Q12330	94 aa	Predicted RBP	7.29	□□□□□ -1.24
MSB4	YOL112W	GPI2	P46961	280 aa		7.28	□□□□□ -1.24
MSB4	YOL112W	YDR274C	P87283	123 aa		7.28	□□□□□ -1.24
MSB4	YOL112W	YOL160W	Q08321	113 aa		7.28	□□□□□ -1.24
MSB4	YOL112W	YOR011W-A	Q3E807	68 aa		7.28	□□□□□ -1.24
MSB4	YOL112W	MSK1	P32048	576 aa		7.27	□□□□□ -1.25
MSB4	YOL112W	SHG1	P38337	142 aa		7.27	□□□□□ -1.25
MSB4	YOL112W	PAU4	P53427	120 aa		7.27	□□□□□ -1.25
MSB4	YOL112W	IZH1	Q03419	316 aa		7.27	□□□□□ -1.25
MSB4	YOL112W	PRM7	Q12459	698 aa		7.27	□□□□□ -1.25
MSB4	YOL112W	COX2	P00410	251 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	DDI2	P0CH63	225 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	DDI3	P0CH64	225 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	HSP12	P22943	109 aa	Known RBP	7.26	□□□□□ -1.25
MSB4	YOL112W	HUA1	P40325	198 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	MIC26	P50087	233 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	MSC3	Q05812	728 aa		7.26	□□□□□ -1.25
MSB4	YOL112W	SDH4	P37298	181 aa		7.25	□□□□□ -1.25
MSB4	YOL112W	FYV6	P53913	173 aa		7.25	□□□□□ -1.25
MSB4	YOL112W	PAU1	P0CE88	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU14	P0CE89	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU6	P0CE90	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU18	P0CE91	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU8	P0CE92	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU11	P0CE93	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	RIB5	P38145	238 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU13	P38725	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	MBB1	P39534	108 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	ALG13	P53178	202 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	TOM7	P53507	60 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU10	Q03050	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	MRX11	Q03079	207 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	IZH3	Q07959	543 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU20	Q08322	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	TY1A-BR	Q12217	440 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	ERV2	Q12284	196 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PAU9	Q3E770	120 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	VMA9	Q3E7B6	73 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	ACP1	P32463	125 aa		7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms