RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YOR292CQ08743 309 aa2.24□□□□□ -2.05
ATG3YNR007C SCP1Q08873 200 aa2.24□□□□□ -2.05
ATG3YNR007C YIL002W-AQ3E7Z5 69 aa2.24□□□□□ -2.05
ATG3YNR007C ODC2Q99297 307 aa2.24□□□□□ -2.05
ATG3YNR007C ADH1P00330 348 aaKnown RBP2.23□□□□□ -2.05
ATG3YNR007C YHR212W-AP0CX91 67 aa2.23□□□□□ -2.05
ATG3YNR007C PDC2P32896 925 aa2.23□□□□□ -2.05
ATG3YNR007C RPS0AP32905 252 aaKnown RBP2.23□□□□□ -2.05
ATG3YNR007C BFR1P38934 470 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
ATG3YNR007C COX16P47081 118 aa2.23□□□□□ -2.05
ATG3YNR007C AIM25P47140 327 aa2.23□□□□□ -2.05
ATG3YNR007C RIB4P50861 169 aaPredicted RBP2.23□□□□□ -2.05
ATG3YNR007C TOS8P53147 276 aa2.23□□□□□ -2.05
ATG3YNR007C YGR018CP53211 109 aa2.23□□□□□ -2.05
ATG3YNR007C ERV29P53337 310 aa2.23□□□□□ -2.05
ATG3YNR007C GRX5Q02784 150 aa2.23□□□□□ -2.05
ATG3YNR007C YML018CQ03730 393 aa2.23□□□□□ -2.05
ATG3YNR007C MSH5Q12175 901 aa2.23□□□□□ -2.05
ATG3YNR007C TFC7Q12415 435 aa2.23□□□□□ -2.05
ATG3YNR007C PAA1Q12447 191 aaKnown RBP2.23□□□□□ -2.05
ATG3YNR007C YPR108W-AQ3E7B3 70 aa2.23□□□□□ -2.05
ATG3YNR007C HTB1P02293 131 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C RPL24BP24000 155 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C ROX3P25046 220 aa2.22□□□□□ -2.05
ATG3YNR007C BUD23P25627 275 aaPredicted RBP2.22□□□□□ -2.05
ATG3YNR007C RPB7P34087 171 aa2.22□□□□□ -2.05
ATG3YNR007C COX15P40086 486 aa2.22□□□□□ -2.05
ATG3YNR007C YJL218WP40892 196 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C ARO8P53090 500 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C ORM1P53224 222 aa2.22□□□□□ -2.05
ATG3YNR007C ERV25P54837 211 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C YLR031WQ07978 186 aa2.22□□□□□ -2.05
ATG3YNR007C YOR283WQ12040 230 aaKnown RBP2.22□□□□□ -2.05
ATG3YNR007C YOR029WQ12243 111 aa2.22□□□□□ -2.05
ATG3YNR007C YGL258W-AQ3E740 77 aa2.22□□□□□ -2.05
ATG3YNR007C PET20Q99373 253 aa2.22□□□□□ -2.05
ATG3YNR007C SAL1D6W196 494 aa2.21□□□□□ -2.06
ATG3YNR007C TRR1P29509 319 aaKnown RBP2.21□□□□□ -2.06
ATG3YNR007C FPR2P32472 135 aa2.21□□□□□ -2.06
ATG3YNR007C ALK2P32789 676 aaPredicted RBP2.21□□□□□ -2.06
ATG3YNR007C ZRT1P32804 376 aa2.21□□□□□ -2.06
ATG3YNR007C YKL162CP36052 402 aa2.21□□□□□ -2.06
ATG3YNR007C ERV15P38312 142 aa2.21□□□□□ -2.06
ATG3YNR007C MIC12P38341 106 aa2.21□□□□□ -2.06
ATG3YNR007C RRT13P40042 185 aa2.21□□□□□ -2.06
ATG3YNR007C AGE2P40529 298 aa2.21□□□□□ -2.06
ATG3YNR007C YFR035CP43608 114 aa2.21□□□□□ -2.06
ATG3YNR007C HIT1P46973 164 aa2.21□□□□□ -2.06
ATG3YNR007C CWC23P52868 283 aaPredicted RBP2.21□□□□□ -2.06
ATG3YNR007C ALG13P53178 202 aa2.21□□□□□ -2.06
ATG3YNR007C YHP1Q04116 353 aa2.21□□□□□ -2.06
ATG3YNR007C SDH7Q04401 133 aa2.21□□□□□ -2.06
ATG3YNR007C NMA1Q06178 401 aaKnown RBP2.21□□□□□ -2.06
ATG3YNR007C KEI1Q06346 221 aa2.21□□□□□ -2.06
ATG3YNR007C ASR1Q06834 288 aa2.21□□□□□ -2.06
ATG3YNR007C YPL162CQ12042 273 aa2.21□□□□□ -2.06
ATG3YNR007C TIR4Q12218 487 aaPredicted RBP2.21□□□□□ -2.06
ATG3YNR007C ATO3Q12359 275 aa2.21□□□□□ -2.06
ATG3YNR007C AGC1Q12482 902 aa2.21□□□□□ -2.06
ATG3YNR007C BOL1Q3E793 110 aa2.21□□□□□ -2.06
ATG3YNR007C MRP17P28778 131 aa2.2□□□□□ -2.06
ATG3YNR007C UTP11P34247 250 aaPredicted RBP2.2□□□□□ -2.06
ATG3YNR007C MRPL38P35996 138 aaPredicted RBP2.2□□□□□ -2.06
ATG3YNR007C SMP1P38128 452 aa2.2□□□□□ -2.06
ATG3YNR007C RRT1P38192 103 aa2.2□□□□□ -2.06
ATG3YNR007C DOG2P38773 246 aa2.2□□□□□ -2.06
ATG3YNR007C DOG1P38774 246 aa2.2□□□□□ -2.06
ATG3YNR007C HTD2P38790 280 aaKnown RBP2.2□□□□□ -2.06
ATG3YNR007C POR2P40478 281 aa2.2□□□□□ -2.06
ATG3YNR007C MRPL49P40858 161 aaPredicted RBP2.2□□□□□ -2.06
ATG3YNR007C AGX1P43567 385 aa2.2□□□□□ -2.06
ATG3YNR007C IRC18P47056 224 aa2.2□□□□□ -2.06
ATG3YNR007C SDS23P53172 527 aa2.2□□□□□ -2.06
ATG3YNR007C CPD1P53314 239 aa2.2□□□□□ -2.06
ATG3YNR007C FYV6P53913 173 aa2.2□□□□□ -2.06
ATG3YNR007C YPL080CQ02826 108 aa2.2□□□□□ -2.06
ATG3YNR007C VPS71Q03433 280 aa2.2□□□□□ -2.06
ATG3YNR007C BER1Q06688 274 aaKnown RBP2.2□□□□□ -2.06
ATG3YNR007C YOR385WQ08909 290 aa2.2□□□□□ -2.06
ATG3YNR007C ATG41Q12048 136 aa2.2□□□□□ -2.06
ATG3YNR007C FCY1Q12178 158 aa2.2□□□□□ -2.06
ATG3YNR007C UTP23Q12339 254 aaKnown RBP2.2□□□□□ -2.06
ATG3YNR007C YOR192C-CQ3E736 78 aa2.2□□□□□ -2.06
ATG3YNR007C YOL085CQ99345 113 aa2.2□□□□□ -2.06
ATG3YNR007C QCR2P07257 368 aa2.19□□□□□ -2.06
ATG3YNR007C SUA5P32579 426 aa2.19□□□□□ -2.06
ATG3YNR007C PAN3P36102 679 aaPredicted RBP2.19□□□□□ -2.06
ATG3YNR007C MRPL3P36516 390 aa2.19□□□□□ -2.06
ATG3YNR007C YBL071CP38185 102 aa2.19□□□□□ -2.06
ATG3YNR007C COS8P38723 381 aa2.19□□□□□ -2.06
ATG3YNR007C SWM2P40342 146 aa2.19□□□□□ -2.06
ATG3YNR007C SER2P42941 309 aa2.19□□□□□ -2.06
ATG3YNR007C FIP1P45976 327 aa2.19□□□□□ -2.06
ATG3YNR007C YGR219WP53307 113 aa2.19□□□□□ -2.06
ATG3YNR007C ACT1P60010 375 aaKnown RBP2.19□□□□□ -2.06
ATG3YNR007C YDR274CP87283 123 aa2.19□□□□□ -2.06
ATG3YNR007C PEX10Q05568 337 aa2.19□□□□□ -2.06
ATG3YNR007C YCT1Q12235 531 aa2.19□□□□□ -2.06
ATG3YNR007C YPS3Q12303 508 aa2.19□□□□□ -2.06
ATG3YNR007C SEN2P16658 377 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms