RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W PET8P38921 284 aa2.55□□□□□ -2
SSU72YNL222W YEA4P40004 342 aa2.55□□□□□ -2
SSU72YNL222W SPC25P40014 221 aa2.55□□□□□ -2
SSU72YNL222W TIF34P40217 347 aaKnown RBP2.55□□□□□ -2
SSU72YNL222W YGL230CP53074 147 aa2.55□□□□□ -2
SSU72YNL222W FMP41P53889 259 aaKnown RBP2.55□□□□□ -2
SSU72YNL222W AAH1P53909 347 aa2.55□□□□□ -2
SSU72YNL222W AIM11P87275 137 aa2.55□□□□□ -2
SSU72YNL222W YMR099CQ03161 297 aaKnown RBP2.55□□□□□ -2
SSU72YNL222W MIX17Q03667 156 aa2.55□□□□□ -2
SSU72YNL222W VBA1Q04301 562 aa2.55□□□□□ -2
SSU72YNL222W TAZ1Q06510 381 aa2.55□□□□□ -2
SSU72YNL222W YOL024WQ08172 172 aa2.55□□□□□ -2
SSU72YNL222W MCP1Q12106 302 aa2.55□□□□□ -2
SSU72YNL222W UTP23Q12339 254 aaKnown RBP2.55□□□□□ -2
SSU72YNL222W PEX11Q12462 236 aa2.55□□□□□ -2
SSU72YNL222W MHT1Q12525 324 aa2.55□□□□□ -2
SSU72YNL222W YIL134C-AQ45U18 67 aa2.55□□□□□ -2
SSU72YNL222W TY1B-NL2Q99337 1749 aaKnown RBP2.55□□□□□ -2
SSU72YNL222W SWR1Q05471 1514 aa2.54□□□□□ -2
SSU72YNL222W PDR11P40550 1411 aa2.54□□□□□ -2
SSU72YNL222W ADH3P07246 375 aaKnown RBP2.54□□□□□ -2
SSU72YNL222W MRS1P07266 363 aa2.54□□□□□ -2
SSU72YNL222W PBI2P0CT04 75 aaKnown RBP2.54□□□□□ -2
SSU72YNL222W RPL2AP0CX45 254 aaKnown RBP2.54□□□□□ -2
SSU72YNL222W RPL2BP0CX46 254 aaKnown RBP2.54□□□□□ -2
SSU72YNL222W HMRA1P0CY11 126 aa2.54□□□□□ -2
SSU72YNL222W IPT1P38954 527 aa2.54□□□□□ -2
SSU72YNL222W AVT2P39981 480 aa2.54□□□□□ -2
SSU72YNL222W RPL13BP40212 199 aaKnown RBP2.54□□□□□ -2
SSU72YNL222W ECO1P43605 281 aa2.54□□□□□ -2
SSU72YNL222W BUD13P46947 266 aaPredicted RBP2.54□□□□□ -2
SSU72YNL222W GON7P46984 123 aa2.54□□□□□ -2
SSU72YNL222W TAD2P47058 250 aa2.54□□□□□ -2
SSU72YNL222W MCM22P47167 239 aa2.54□□□□□ -2
SSU72YNL222W YGR219WP53307 113 aa2.54□□□□□ -2
SSU72YNL222W PDR17P53844 350 aa2.54□□□□□ -2
SSU72YNL222W YNL095CP53932 642 aa2.54□□□□□ -2
SSU72YNL222W CUE4Q04201 117 aaPredicted RBP2.54□□□□□ -2
SSU72YNL222W YDR114CQ04597 100 aa2.54□□□□□ -2
SSU72YNL222W FCF1Q05498 189 aaPredicted RBP2.54□□□□□ -2
SSU72YNL222W INM2Q05533 292 aa2.54□□□□□ -2
SSU72YNL222W YOL131WQ08270 108 aa2.54□□□□□ -2
SSU72YNL222W SNQ2P32568 1501 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W PAI3P01094 68 aa2.53□□□□□ -2
SSU72YNL222W YPR170W-BP0C5R9 85 aa2.53□□□□□ -2
SSU72YNL222W RPB3P16370 318 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W TRX3P25372 127 aa2.53□□□□□ -2
SSU72YNL222W PEX34P25584 144 aa2.53□□□□□ -2
SSU72YNL222W YCR090CP25654 182 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W SWD2P36104 329 aaPredicted RBP2.53□□□□□ -2
SSU72YNL222W YKR070WP36151 352 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W PDX3P38075 228 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W TEM1P38987 245 aa2.53□□□□□ -2
SSU72YNL222W HMF1P40037 129 aaKnown RBP2.53□□□□□ -2
SSU72YNL222W APQ12P40532 138 aa2.53□□□□□ -2
SSU72YNL222W YFR045WP43617 309 aa2.53□□□□□ -2
SSU72YNL222W OST2P46964 130 aa2.53□□□□□ -2
SSU72YNL222W SBH1P52870 82 aa2.53□□□□□ -2
SSU72YNL222W YGR039WP53225 103 aa2.53□□□□□ -2
SSU72YNL222W CAB4P53332 305 aa2.53□□□□□ -2
SSU72YNL222W SDC1Q03323 175 aa2.53□□□□□ -2
SSU72YNL222W VPS71Q03433 280 aa2.53□□□□□ -2
SSU72YNL222W YDR209CQ03480 137 aa2.53□□□□□ -2
SSU72YNL222W NAT3Q06504 195 aa2.53□□□□□ -2
SSU72YNL222W SWC7Q06707 132 aa2.53□□□□□ -2
SSU72YNL222W COA6Q3E846 104 aa2.53□□□□□ -2
SSU72YNL222W KOG1P38873 1557 aa2.53□□□□□ -2.01
SSU72YNL222W SEC7P11075 2009 aaKnown RBP2.52□□□□□ -2.01
SSU72YNL222W SIR2P06700 562 aa2.52□□□□□ -2.01
SSU72YNL222W SEC4P07560 215 aaKnown RBP2.52□□□□□ -2.01
SSU72YNL222W UBC5P15732 148 aa2.52□□□□□ -2.01
SSU72YNL222W QRI5P32344 111 aa2.52□□□□□ -2.01
SSU72YNL222W MRPL11P36521 249 aaPredicted RBP2.52□□□□□ -2.01
SSU72YNL222W YIL012WP40551 113 aa2.52□□□□□ -2.01
SSU72YNL222W PAM16P42949 149 aa2.52□□□□□ -2.01
SSU72YNL222W SFT1P43682 97 aa2.52□□□□□ -2.01
SSU72YNL222W TOS8P53147 276 aa2.52□□□□□ -2.01
SSU72YNL222W HEM25Q07534 307 aa2.52□□□□□ -2.01
SSU72YNL222W COQ10Q08058 207 aa2.52□□□□□ -2.01
SSU72YNL222W YPL245WQ12179 454 aaKnown RBP2.52□□□□□ -2.01
SSU72YNL222W HUT1Q12520 339 aa2.52□□□□□ -2.01
SSU72YNL222W YNR034W-AQ3E841 98 aa2.52□□□□□ -2.01
SSU72YNL222W IGO2Q9P305 131 aa2.52□□□□□ -2.01
SSU72YNL222W SPO14P36126 1683 aa2.52□□□□□ -2.01
SSU72YNL222W ATG2P53855 1592 aa2.52□□□□□ -2.01
SSU72YNL222W RRP5Q05022 1729 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W RAD6P06104 172 aa2.51□□□□□ -2.01
SSU72YNL222W TMA19P35691 167 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W YBL081WP38180 368 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W ATG8P38182 117 aaRIP-Chip data2.51□□□□□ -2.01not detected
SSU72YNL222W RPB11P38902 120 aa2.51□□□□□ -2.01
SSU72YNL222W EDC2P40023 145 aaPredicted RBP2.51□□□□□ -2.01
SSU72YNL222W CCS1P40202 249 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W YPL073CP40323 161 aa2.51□□□□□ -2.01
SSU72YNL222W CWP2P43497 92 aa2.51□□□□□ -2.01
SSU72YNL222W YFL065CP43539 102 aa2.51□□□□□ -2.01
SSU72YNL222W ARP3P47117 449 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W THG1P53215 237 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W LSM3P57743 89 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms