RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	UTR5	P32630	166 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	GSP1	P32835	219 aa	Known RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	GSP2	P32836	220 aa	Known RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	SPC29	P33419	253 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YGR269W	P40326	108 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	ERG25	P53045	309 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YIP5	P53108	310 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	DUG3	P53871	357 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YDC1	Q02896	317 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	RDL2	Q08742	149 aa	Known RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	YOP1	Q12402	180 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YOS1	Q3E834	85 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	RPI1	P23250	407 aa	Known RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	SUA7	P29055	345 aa	Predicted RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	ZRT1	P32804	376 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YBL059W	P34224	193 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	RPB11	P38902	120 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YNL200C	P40165	246 aa	Known RBP	3.57	□□□□□ -1.84
RIA1	YNL163C	SAS2	P40963	338 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	SHR5	P41912	237 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	RFU1	Q08003	200 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	THI72	Q08579	599 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	FRE8	Q12209	686 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	YPR071W	Q12346	211 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	SLO1	Q3E784	85 aa		3.57	□□□□□ -1.84
RIA1	YNL163C	AIM17	P23180	465 aa	Known RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	FEN2	P25621	512 aa	Known RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	SPS18	P32572	300 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	YUH1	P35127	236 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	MSL1	P40567	111 aa	Predicted RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	CRZ1	P53968	678 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	PAM18	Q07914	168 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	YDL180W	Q12301	547 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	ATO3	Q12359	275 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	DDI2	P0CH63	225 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	DDI3	P0CH64	225 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	RPL13B	P40212	199 aa	Known RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	ATG4	P53867	494 aa		3.56	□□□□□ -1.84
RIA1	YNL163C	YPR147C	Q06522	304 aa	Known RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	RPL13A	Q12690	199 aa	Predicted RBP	3.56	□□□□□ -1.84
RIA1	YNL163C	GZF3	P42944	551 aa	Known RBP	3.55	□□□□□ -1.84
RIA1	YNL163C	TOM7	P53507	60 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YNL184C	P53876	108 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	HED1	Q03937	162 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	MIX14	Q04341	121 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YPR108W-A	Q3E7B3	70 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	IRC25	Q07951	179 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	GLT1	Q12680	2145 aa	Known RBP	3.55	□□□□□ -1.84
RIA1	YNL163C	YBR220C	P38318	560 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	SRP14	P38985	146 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	HAC1	P41546	238 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YGR017W	P53210	297 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YLR460C	P54007	376 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	LPP1	Q04396	274 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YDL218W	Q07629	317 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	YLR365W	Q7LIF2	110 aa		3.55	□□□□□ -1.84
RIA1	YNL163C	ADH1	P00330	348 aa	Known RBP	3.54	□□□□□ -1.84
RIA1	YNL163C	YPR170W-B	P0C5R9	85 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	SEC11	P15367	167 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	RNA15	P25299	296 aa	Predicted RBP	3.54	□□□□□ -1.84
RIA1	YNL163C	POP2	P39008	433 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YGR050C	P53231	118 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	DIA1	P54005	336 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	MOT3	P54785	490 aa	Known RBP	3.54	□□□□□ -1.84
RIA1	YNL163C	COQ11	Q05892	277 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
RIA1	YNL163C	RNH203	Q12338	110 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YLR358C	O13565	187 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	IMP1	P28627	190 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YHL037C	P38733	133 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	SEC72	P39742	193 aa	Known RBP	3.54	□□□□□ -1.84
RIA1	YNL163C	YJL163C	P46996	555 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	RAF1	Q06891	181 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	SCO1	P23833	295 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	RTG1	P32607	177 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	SFT2	P38166	215 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	COX15	P40086	486 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YNL198C	P40166	100 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	HNT2	P49775	206 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YGL260W	P53056	76 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	RAV2	Q03956	351 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YPR098C	Q06089	161 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	ATG33	Q06485	197 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	YPL264C	Q08980	353 aa		3.54	□□□□□ -1.84
RIA1	YNL163C	RPL23A	P0CX41	137 aa	Known RBP	3.53	□□□□□ -1.84
RIA1	YNL163C	RPL23B	P0CX42	137 aa	Known RBP	3.53	□□□□□ -1.84
RIA1	YNL163C	FZF1	P32805	299 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	PAU16	P35994	123 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	REE1	P40893	198 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	PEX4	P29340	183 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	NNK1	P36003	928 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	XBP1	P40489	647 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	TNA1	P53322	534 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	RHO5	P53879	331 aa	Known RBP	3.53	□□□□□ -1.84
RIA1	YNL163C	ATG21	Q02887	496 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	PAU23	Q07987	124 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	YOR376W	Q08900	122 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	PAU17	Q12370	124 aa		3.53	□□□□□ -1.84
RIA1	YNL163C	QCR9	P22289	66 aa		3.52	□□□□□ -1.85
RIA1	YNL163C	ARP3	P47117	449 aa	Known RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms