RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W SHO1P40073 367 aa1.51□□□□□ -2.17
RTP1YMR185W YER134CP40081 178 aa1.51□□□□□ -2.17
RTP1YMR185W GPP2P40106 250 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W DFG10P40526 253 aa1.51□□□□□ -2.17
RTP1YMR185W CUP9P41817 306 aa1.51□□□□□ -2.17
RTP1YMR185W EGT2P42835 1041 aa1.51□□□□□ -2.17
RTP1YMR185W SPG5P42933 373 aa1.51□□□□□ -2.17
RTP1YMR185W YJL028WP47062 111 aa1.51□□□□□ -2.17
RTP1YMR185W ARP3P47117 449 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W YDR366CP87287 132 aa1.51□□□□□ -2.17
RTP1YMR185W YMR007WQ03675 126 aa1.51□□□□□ -2.17
RTP1YMR185W YOL024WQ08172 172 aa1.51□□□□□ -2.17
RTP1YMR185W FIT3Q08907 204 aa1.51□□□□□ -2.17
RTP1YMR185W CSM4Q08955 156 aa1.51□□□□□ -2.17
RTP1YMR185W YBR056W-AI2HB52 66 aa1.51□□□□□ -2.17
RTP1YMR185W ADH2P00331 348 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W COX1P00401 534 aa1.51□□□□□ -2.17
RTP1YMR185W RPL12AP0CX53 165 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W RPL12BP0CX54 165 aa1.51□□□□□ -2.17
RTP1YMR185W YHR214C-DP0CX93 97 aa1.51□□□□□ -2.17
RTP1YMR185W SEC11P15367 167 aa1.51□□□□□ -2.17
RTP1YMR185W BET2P20133 325 aa1.51□□□□□ -2.17
RTP1YMR185W FEN2P25621 512 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W MIG1P27705 504 aa1.51□□□□□ -2.17
RTP1YMR185W REC104P33323 182 aa1.51□□□□□ -2.17
RTP1YMR185W YKL069WP36088 180 aa1.51□□□□□ -2.17
RTP1YMR185W YHR173CP38864 112 aa1.51□□□□□ -2.17
RTP1YMR185W YHR210CP38893 341 aa1.51□□□□□ -2.17
RTP1YMR185W YER079WP40052 210 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W YIL012WP40551 113 aa1.51□□□□□ -2.17
RTP1YMR185W HAC1P41546 238 aa1.51□□□□□ -2.17
RTP1YMR185W YJL163CP46996 555 aa1.51□□□□□ -2.17
RTP1YMR185W THG1P53215 237 aaKnown RBP1.51□□□□□ -2.17
RTP1YMR185W LPP1Q04396 274 aa1.51□□□□□ -2.17
RTP1YMR185W YFT2Q06676 274 aa1.51□□□□□ -2.17
RTP1YMR185W FCY2P17064 533 aa1.5□□□□□ -2.17
RTP1YMR185W ATP10P18496 279 aa1.5□□□□□ -2.17
RTP1YMR185W IMG2P25642 146 aaPredicted RBP1.5□□□□□ -2.17
RTP1YMR185W DER1P38307 211 aa1.5□□□□□ -2.17
RTP1YMR185W TIF34P40217 347 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W SEC24P40482 926 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W OST1P41543 476 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W COX18P53239 316 aa1.5□□□□□ -2.17
RTP1YMR185W YPL067CQ02754 198 aa1.5□□□□□ -2.17
RTP1YMR185W BET5Q03630 159 aa1.5□□□□□ -2.17
RTP1YMR185W CGI121Q03705 181 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W YDR102CQ03864 110 aa1.5□□□□□ -2.17
RTP1YMR185W UPS3Q04006 179 aa1.5□□□□□ -2.17
RTP1YMR185W GRH1Q04410 372 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W GIM5Q04493 163 aa1.5□□□□□ -2.17
RTP1YMR185W NAT3Q06504 195 aa1.5□□□□□ -2.17
RTP1YMR185W LDS2Q08218 356 aa1.5□□□□□ -2.17
RTP1YMR185W YKL023C-AQ2V2P3 75 aa1.5□□□□□ -2.17
RTP1YMR185W YIL046W-AQ3E7Z4 54 aa1.5□□□□□ -2.17
RTP1YMR185W YPT1P01123 206 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W RPL7AP05737 244 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W DFR1P07807 211 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
RTP1YMR185W CDC26P14724 124 aa1.5□□□□□ -2.17
RTP1YMR185W ANB1P19211 157 aa1.5□□□□□ -2.17
RTP1YMR185W RPI1P23250 407 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W ERG8P24521 451 aa1.5□□□□□ -2.17
RTP1YMR185W DAL80P26343 269 aa1.5□□□□□ -2.17
RTP1YMR185W IMP1P28627 190 aa1.5□□□□□ -2.17
RTP1YMR185W MCH2P36032 473 aa1.5□□□□□ -2.17
RTP1YMR185W DAD2P36162 133 aa1.5□□□□□ -2.17
RTP1YMR185W RPF1P38805 295 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W YML079WQ03629 201 aa1.5□□□□□ -2.17
RTP1YMR185W TSA2Q04120 196 aa1.5□□□□□ -2.17
RTP1YMR185W RIM9Q04734 239 aa1.5□□□□□ -2.17
RTP1YMR185W YLR296WQ05898 108 aa1.5□□□□□ -2.17
RTP1YMR185W ARR3Q06598 404 aa1.5□□□□□ -2.17
RTP1YMR185W USV1Q12132 391 aa1.5□□□□□ -2.17
RTP1YMR185W RPL7BQ12213 244 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W PRP46Q12417 451 aaPredicted RBP1.5□□□□□ -2.17
RTP1YMR185W COX2P00410 251 aa1.5□□□□□ -2.17
RTP1YMR185W MRS1P07266 363 aa1.5□□□□□ -2.17
RTP1YMR185W PCL1P24867 279 aa1.5□□□□□ -2.17
RTP1YMR185W YCR006CP25350 157 aa1.5□□□□□ -2.17
RTP1YMR185W SPC29P33419 253 aa1.5□□□□□ -2.17
RTP1YMR185W YOX1P34161 385 aa1.5□□□□□ -2.17
RTP1YMR185W YKL097CP34245 136 aa1.5□□□□□ -2.17
RTP1YMR185W YKL044WP36092 106 aa1.5□□□□□ -2.17
RTP1YMR185W YHL044WP38727 235 aa1.5□□□□□ -2.17
RTP1YMR185W MSL1P40567 111 aaPredicted RBP1.5□□□□□ -2.17
RTP1YMR185W CIS3P47001 227 aa1.5□□□□□ -2.17
RTP1YMR185W YJL118WP47022 219 aa1.5□□□□□ -2.17
RTP1YMR185W DSK2P48510 373 aa1.5□□□□□ -2.17
RTP1YMR185W YDL183CP48569 320 aa1.5□□□□□ -2.17
RTP1YMR185W TAF4P50105 388 aa1.5□□□□□ -2.17
RTP1YMR185W SSU72P53538 206 aaPredicted RBP1.5□□□□□ -2.17
RTP1YMR185W MRX11Q03079 207 aa1.5□□□□□ -2.17
RTP1YMR185W ECM18Q04623 453 aa1.5□□□□□ -2.17
RTP1YMR185W YFH1Q07540 174 aa1.5□□□□□ -2.17
RTP1YMR185W IZH3Q07959 543 aa1.5□□□□□ -2.17
RTP1YMR185W CSI2Q08054 341 aa1.5□□□□□ -2.17
RTP1YMR185W YOL118CQ08259 102 aa1.5□□□□□ -2.17
RTP1YMR185W RRS1Q08746 203 aaKnown RBP1.5□□□□□ -2.17
RTP1YMR185W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
RTP1YMR185W YDL180WQ12301 547 aa1.5□□□□□ -2.17
RTP1YMR185W YOR192C-CQ3E736 78 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms