RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W ARP3P47117 449 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W PGU1P47180 361 aa3.18□□□□□ -1.9
ECM16YMR128W APS2Q00381 147 aa3.18□□□□□ -1.9
ECM16YMR128W DYN2Q02647 92 aa3.18□□□□□ -1.9
ECM16YMR128W YDR114CQ04597 100 aa3.18□□□□□ -1.9
ECM16YMR128W LOA1Q06508 300 aa3.18□□□□□ -1.9
ECM16YMR128W PAM18Q07914 168 aa3.18□□□□□ -1.9
ECM16YMR128W YOR292CQ08743 309 aa3.18□□□□□ -1.9
ECM16YMR128W HTB1P02293 131 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W HTB2P02294 131 aa3.18□□□□□ -1.9
ECM16YMR128W SPO7P18410 259 aa3.18□□□□□ -1.9
ECM16YMR128W UTR5P32630 166 aa3.18□□□□□ -1.9
ECM16YMR128W OST1P41543 476 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W DUG3P53871 357 aa3.18□□□□□ -1.9
ECM16YMR128W YPL080CQ02826 108 aa3.18□□□□□ -1.9
ECM16YMR128W CGI121Q03705 181 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W MSC3Q05812 728 aa3.18□□□□□ -1.9
ECM16YMR128W YLR179CQ06252 201 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W YDR034W-BQ6Q5X2 51 aa3.18□□□□□ -1.9
ECM16YMR128W SOD1P00445 154 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W SEC4P07560 215 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W IMP1P28627 190 aa3.18□□□□□ -1.9
ECM16YMR128W AME1P38313 324 aa3.18□□□□□ -1.9
ECM16YMR128W TEM1P38987 245 aa3.18□□□□□ -1.9
ECM16YMR128W CWC27Q02770 301 aa3.18□□□□□ -1.9
ECM16YMR128W FLO9P39712 1322 aa3.18□□□□□ -1.9
ECM16YMR128W YLR302CO13544 120 aa3.17□□□□□ -1.9
ECM16YMR128W QCR9P22289 66 aa3.17□□□□□ -1.9
ECM16YMR128W COX15P40086 486 aa3.17□□□□□ -1.9
ECM16YMR128W YJR015WP47090 510 aa3.17□□□□□ -1.9
ECM16YMR128W YIP5P53108 310 aa3.17□□□□□ -1.9
ECM16YMR128W YHP1Q04116 353 aa3.17□□□□□ -1.9
ECM16YMR128W ARC18Q05933 178 aaKnown RBP3.17□□□□□ -1.9
ECM16YMR128W YOR105WQ08504 108 aa3.17□□□□□ -1.9
ECM16YMR128W NIP7Q08962 181 aaKnown RBP3.17□□□□□ -1.9
ECM16YMR128W TGS1Q12052 315 aa3.17□□□□□ -1.9
ECM16YMR128W HAP3P13434 144 aa3.17□□□□□ -1.9
ECM16YMR128W ATP10P18496 279 aa3.17□□□□□ -1.9
ECM16YMR128W SUA7P29055 345 aaPredicted RBP3.17□□□□□ -1.9
ECM16YMR128W MTC6P38849 526 aa3.17□□□□□ -1.9
ECM16YMR128W GPI2P46961 280 aa3.17□□□□□ -1.9
ECM16YMR128W YDR366CP87287 132 aa3.17□□□□□ -1.9
ECM16YMR128W YPL077CQ02831 240 aa3.17□□□□□ -1.9
ECM16YMR128W YPR170W-BP0C5R9 85 aa3.17□□□□□ -1.9
ECM16YMR128W PCP1P53259 346 aa3.17□□□□□ -1.9
ECM16YMR128W ATG4P53867 494 aa3.17□□□□□ -1.9
ECM16YMR128W LPP1Q04396 274 aa3.17□□□□□ -1.9
ECM16YMR128W MCH1Q07376 486 aa3.17□□□□□ -1.9
ECM16YMR128W YOL024WQ08172 172 aa3.17□□□□□ -1.9
ECM16YMR128W NOP1P15646 327 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W YKL102CP34249 101 aa3.16□□□□□ -1.9
ECM16YMR128W YNL200CP40165 246 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W CCS1P40202 249 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W REE1P40893 198 aa3.16□□□□□ -1.9
ECM16YMR128W TVP18Q04767 167 aa3.16□□□□□ -1.9
ECM16YMR128W COQ11Q05892 277 aa3.16□□□□□ -1.9
ECM16YMR128W RPS22AP0C0W1 130 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W SEC11P15367 167 aa3.16□□□□□ -1.9
ECM16YMR128W PAU16P35994 123 aa3.16□□□□□ -1.9
ECM16YMR128W PRE5P40302 234 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W RPA43P46669 326 aa3.16□□□□□ -1.9
ECM16YMR128W MIX14Q04341 121 aa3.16□□□□□ -1.9
ECM16YMR128W RXT3Q07458 294 aa3.16□□□□□ -1.9
ECM16YMR128W Q0144Q9ZZW2 109 aa3.16□□□□□ -1.9
ECM16YMR128W RPS2P25443 254 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W SRP21P32342 167 aa3.16□□□□□ -1.9
ECM16YMR128W MIX23P38162 196 aa3.16□□□□□ -1.9
ECM16YMR128W RAF1Q06891 181 aa3.16□□□□□ -1.9
ECM16YMR128W RDL1Q12305 139 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W SMT3Q12306 101 aaKnown RBP3.16□□□□□ -1.9
ECM16YMR128W BOL1Q3E793 110 aa3.16□□□□□ -1.9
ECM16YMR128W MTR2P34232 184 aaKnown RBP3.15□□□□□ -1.9
ECM16YMR128W YKL075CP36083 450 aa3.15□□□□□ -1.9
ECM16YMR128W BDH1P39714 382 aa3.15□□□□□ -1.9
ECM16YMR128W SDC1Q03323 175 aa3.15□□□□□ -1.9
ECM16YMR128W MRPS5P33759 307 aa3.15□□□□□ -1.91
ECM16YMR128W DOG1P38774 246 aa3.15□□□□□ -1.91
ECM16YMR128W DUO1P53168 247 aaKnown RBP3.15□□□□□ -1.91
ECM16YMR128W DIG2Q03373 323 aaKnown RBP3.15□□□□□ -1.91
ECM16YMR128W POS5Q06892 414 aa3.15□□□□□ -1.91
ECM16YMR128W PAU23Q07987 124 aa3.15□□□□□ -1.91
ECM16YMR128W RKI1Q12189 258 aa3.15□□□□□ -1.91
ECM16YMR128W COX17Q12287 69 aa3.15□□□□□ -1.91
ECM16YMR128W PAU17Q12370 124 aa3.15□□□□□ -1.91
ECM16YMR128W COX1P00401 534 aa3.15□□□□□ -1.91
ECM16YMR128W FZF1P32805 299 aa3.15□□□□□ -1.91
ECM16YMR128W NTC20P38302 140 aaPredicted RBP3.15□□□□□ -1.91
ECM16YMR128W UME6P39001 836 aa3.15□□□□□ -1.91
ECM16YMR128W SEC24P40482 926 aaKnown RBP3.15□□□□□ -1.91
ECM16YMR128W TOM7P53507 60 aa3.15□□□□□ -1.91
ECM16YMR128W RAV2Q03956 351 aa3.15□□□□□ -1.91
ECM16YMR128W ATO3Q12359 275 aa3.15□□□□□ -1.91
ECM16YMR128W DDI2P0CH63 225 aa3.14□□□□□ -1.91
ECM16YMR128W DDI3P0CH64 225 aa3.14□□□□□ -1.91
ECM16YMR128W YFL015CP43578 164 aa3.14□□□□□ -1.91
ECM16YMR128W TDA4P47153 279 aa3.14□□□□□ -1.91
ECM16YMR128W THG1P53215 237 aaKnown RBP3.14□□□□□ -1.91
ECM16YMR128W SWT21P53873 357 aaPredicted RBP3.14□□□□□ -1.91
ECM16YMR128W USB1Q12208 290 aaKnown RBP3.14□□□□□ -1.91
ECM16YMR128W ZRT1P32804 376 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms