RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W MRP49P32388 137 aa2.92□□□□□ -1.94
LCB5YLR260W RPS20P38701 121 aaKnown RBP2.92□□□□□ -1.94
LCB5YLR260W YHL037CP38733 133 aa2.92□□□□□ -1.94
LCB5YLR260W YHR180WP38868 163 aa2.92□□□□□ -1.94
LCB5YLR260W COX14P39103 70 aa2.92□□□□□ -1.94
LCB5YLR260W AVT7P40501 490 aa2.92□□□□□ -1.94
LCB5YLR260W MPC1P53157 130 aaKnown RBP2.92□□□□□ -1.94
LCB5YLR260W MRH4P53166 561 aa2.92□□□□□ -1.94
LCB5YLR260W FMP41P53889 259 aaKnown RBP2.92□□□□□ -1.94
LCB5YLR260W DGA1Q08650 418 aa2.92□□□□□ -1.94
LCB5YLR260W YOR292CQ08743 309 aa2.92□□□□□ -1.94
LCB5YLR260W ATP14Q12349 124 aa2.92□□□□□ -1.94
LCB5YLR260W SIR2P06700 562 aa2.91□□□□□ -1.94
LCB5YLR260W MSI1P13712 422 aa2.91□□□□□ -1.94
LCB5YLR260W YCR025CP25352 136 aa2.91□□□□□ -1.94
LCB5YLR260W TIM12P32830 109 aa2.91□□□□□ -1.94
LCB5YLR260W PDX3P38075 228 aaKnown RBP2.91□□□□□ -1.94
LCB5YLR260W YPT31P38555 223 aaKnown RBP2.91□□□□□ -1.94
LCB5YLR260W ARO8P53090 500 aaKnown RBP2.91□□□□□ -1.94
LCB5YLR260W HHT1P61830 136 aa2.91□□□□□ -1.94
LCB5YLR260W APS2Q00381 147 aa2.91□□□□□ -1.94
LCB5YLR260W PRR2Q12310 699 aa2.91□□□□□ -1.94
LCB5YLR260W YOR343CQ12484 108 aa2.91□□□□□ -1.94
LCB5YLR260W RPS18AP0CX55 146 aaKnown RBP2.91□□□□□ -1.94
LCB5YLR260W RPS18BP0CX56 146 aaPredicted RBP2.91□□□□□ -1.94
LCB5YLR260W PEX4P29340 183 aa2.91□□□□□ -1.94
LCB5YLR260W SPT14P32363 452 aa2.91□□□□□ -1.94
LCB5YLR260W YPT53P36019 220 aa2.91□□□□□ -1.94
LCB5YLR260W FMP48P53233 369 aa2.91□□□□□ -1.94
LCB5YLR260W ERV29P53337 310 aa2.91□□□□□ -1.94
LCB5YLR260W YNR062CP53748 327 aa2.91□□□□□ -1.94
LCB5YLR260W DAD3P69850 94 aa2.91□□□□□ -1.94
LCB5YLR260W COF1Q03048 143 aaKnown RBP2.91□□□□□ -1.94
LCB5YLR260W YPL039WQ03080 316 aa2.91□□□□□ -1.94
LCB5YLR260W TMA23Q03525 211 aa2.91□□□□□ -1.94
LCB5YLR260W TVP18Q04767 167 aa2.91□□□□□ -1.94
LCB5YLR260W SYC1Q08553 188 aaPredicted RBP2.91□□□□□ -1.94
LCB5YLR260W YLR099W-AQ3E798 87 aa2.91□□□□□ -1.94
LCB5YLR260W CDC43P18898 376 aa2.9□□□□□ -1.95
LCB5YLR260W SCM4P32564 187 aa2.9□□□□□ -1.95
LCB5YLR260W PAN3P36102 679 aaPredicted RBP2.9□□□□□ -1.95
LCB5YLR260W OST2P46964 130 aa2.9□□□□□ -1.95
LCB5YLR260W RNH201P53942 307 aa2.9□□□□□ -1.95
LCB5YLR260W ERP1Q05359 219 aaKnown RBP2.9□□□□□ -1.95
LCB5YLR260W CNL1Q06333 122 aa2.9□□□□□ -1.95
LCB5YLR260W MCH1Q07376 486 aa2.9□□□□□ -1.95
LCB5YLR260W HRT1Q08273 121 aa2.9□□□□□ -1.95
LCB5YLR260W EAF3Q12432 401 aa2.9□□□□□ -1.95
LCB5YLR260W MHF2Q3E829 80 aa2.9□□□□□ -1.95
LCB5YLR260W VAR1P02381 398 aa2.89□□□□□ -1.95
LCB5YLR260W PCL1P24867 279 aa2.89□□□□□ -1.95
LCB5YLR260W SHE2P36068 246 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
LCB5YLR260W CSH1P38287 376 aa2.89□□□□□ -1.95
LCB5YLR260W OST1P41543 476 aaKnown RBP2.89□□□□□ -1.95
LCB5YLR260W ARP3P47117 449 aaKnown RBP2.89□□□□□ -1.95
LCB5YLR260W DOC1P53068 250 aa2.89□□□□□ -1.95
LCB5YLR260W YGR050CP53231 118 aa2.89□□□□□ -1.95
LCB5YLR260W YCL001W-AP87012 153 aa2.89□□□□□ -1.95
LCB5YLR260W MPD1Q12404 318 aaKnown RBP2.89□□□□□ -1.95
LCB5YLR260W YBL112CQ3E7Y4 105 aa2.89□□□□□ -1.95
LCB5YLR260W BPH1P25356 2167 aa2.89□□□□□ -1.95
LCB5YLR260W RPL15AP05748 204 aaKnown RBP2.89□□□□□ -1.95
LCB5YLR260W YOL162WP0CF19 215 aa2.89□□□□□ -1.95
LCB5YLR260W MRS3P10566 314 aa2.89□□□□□ -1.95
LCB5YLR260W SPO13P23624 291 aa2.89□□□□□ -1.95
LCB5YLR260W YPL073CP40323 161 aa2.89□□□□□ -1.95
LCB5YLR260W GLR1P41921 483 aaKnown RBP2.89□□□□□ -1.95
LCB5YLR260W YGR219WP53307 113 aa2.89□□□□□ -1.95
LCB5YLR260W CAB4P53332 305 aa2.89□□□□□ -1.95
LCB5YLR260W AAH1P53909 347 aa2.89□□□□□ -1.95
LCB5YLR260W RPL15BP54780 204 aaPredicted RBP2.89□□□□□ -1.95
LCB5YLR260W MRX8Q05473 314 aa2.89□□□□□ -1.95
LCB5YLR260W RAF1Q06891 181 aa2.89□□□□□ -1.95
LCB5YLR260W TMC1Q08422 150 aaPredicted RBP2.89□□□□□ -1.95
LCB5YLR260W TIR4Q12218 487 aaPredicted RBP2.89□□□□□ -1.95
LCB5YLR260W YDL180WQ12301 547 aa2.89□□□□□ -1.95
LCB5YLR260W Q0297Q9ZZV8 51 aa2.89□□□□□ -1.95
LCB5YLR260W MBF1O14467 151 aaKnown RBP2.88□□□□□ -1.95
LCB5YLR260W ADH1P00330 348 aaKnown RBP2.88□□□□□ -1.95
LCB5YLR260W YER039C-AP0CD97 72 aa2.88□□□□□ -1.95
LCB5YLR260W RPL30P14120 105 aaKnown RBP2.88□□□□□ -1.95
LCB5YLR260W YBR063CP38083 404 aa2.88□□□□□ -1.95
LCB5YLR260W CAT5P41735 233 aa2.88□□□□□ -1.95
LCB5YLR260W HHO1P53551 258 aa2.88□□□□□ -1.95
LCB5YLR260W PGA1P53896 198 aa2.88□□□□□ -1.95
LCB5YLR260W AIM36Q03798 255 aa2.88□□□□□ -1.95
LCB5YLR260W THI74Q04083 370 aa2.88□□□□□ -1.95
LCB5YLR260W FCF2Q12035 217 aaPredicted RBP2.88□□□□□ -1.95
LCB5YLR260W YCR075W-AQ3E830 75 aa2.88□□□□□ -1.95
LCB5YLR260W MIX23P38162 196 aa2.88□□□□□ -1.95
LCB5YLR260W POP8P38208 133 aa2.88□□□□□ -1.95
LCB5YLR260W GNA1P43577 159 aaPredicted RBP2.88□□□□□ -1.95
LCB5YLR260W COS10P52924 374 aa2.88□□□□□ -1.95
LCB5YLR260W YGR026WP53217 278 aa2.88□□□□□ -1.95
LCB5YLR260W YDR102CQ03864 110 aa2.88□□□□□ -1.95
LCB5YLR260W YTH1Q06102 208 aaPredicted RBP2.88□□□□□ -1.95
LCB5YLR260W IRC19Q07843 230 aa2.88□□□□□ -1.95
LCB5YLR260W SPC3Q12133 184 aa2.88□□□□□ -1.95
LCB5YLR260W YOR097CQ12274 175 aaPredicted RBP2.88□□□□□ -1.95
LCB5YLR260W YPR014CQ6B0W2 109 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms