RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C POC4Q12245 148 aaPredicted RBP2.01□□□□□ -2.09
CSF1YLR087C YFL041W-AQ3E817 63 aa2.01□□□□□ -2.09
CSF1YLR087C RPL35AP0CX84 120 aaKnown RBP2.01□□□□□ -2.09
CSF1YLR087C RPL35BP0CX85 120 aaKnown RBP2.01□□□□□ -2.09
CSF1YLR087C VMA11P32842 164 aa2.01□□□□□ -2.09
CSF1YLR087C SWD3P38123 315 aa2.01□□□□□ -2.09
CSF1YLR087C GPX2P38143 162 aa2.01□□□□□ -2.09
CSF1YLR087C LDB7P38210 180 aa2.01□□□□□ -2.09
CSF1YLR087C SCW11P53189 542 aa2.01□□□□□ -2.09
CSF1YLR087C YNL092WP53934 400 aa2.01□□□□□ -2.09
CSF1YLR087C ISD11Q6Q560 94 aa2.01□□□□□ -2.09
CSF1YLR087C PHO88P38264 188 aaPredicted RBP2.01□□□□□ -2.09
CSF1YLR087C CTK2P46962 323 aa2.01□□□□□ -2.09
CSF1YLR087C ARP3P47117 449 aaKnown RBP2.01□□□□□ -2.09
CSF1YLR087C GDH1P07262 454 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C TIM12P32830 109 aa2□□□□□ -2.09
CSF1YLR087C RHO5P53879 331 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C MOT3P54785 490 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C YPL067CQ02754 198 aa2□□□□□ -2.09
CSF1YLR087C FMP16Q12497 93 aa2□□□□□ -2.09
CSF1YLR087C OAC1P32332 324 aa2□□□□□ -2.09
CSF1YLR087C PUB1P32588 453 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
CSF1YLR087C RPS26AP39938 119 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C RPS26BP39939 119 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C LYS5P50113 272 aa2□□□□□ -2.09
CSF1YLR087C MHR1Q06630 226 aa2□□□□□ -2.09
CSF1YLR087C YDL009CQ12210 107 aa2□□□□□ -2.09
CSF1YLR087C TIR2P33890 251 aa2□□□□□ -2.09
CSF1YLR087C GIC1P38785 314 aa2□□□□□ -2.09
CSF1YLR087C ESS1P22696 170 aa2□□□□□ -2.09
CSF1YLR087C FLX1P40464 311 aa2□□□□□ -2.09
CSF1YLR087C AVT1P47082 602 aa2□□□□□ -2.09
CSF1YLR087C YDR415CQ04033 374 aaPredicted RBP2□□□□□ -2.09
CSF1YLR087C RRG8Q06109 277 aa2□□□□□ -2.09
CSF1YLR087C CSR2Q12734 1121 aa2□□□□□ -2.09
CSF1YLR087C YLR363W-AQ3E747 85 aa2□□□□□ -2.09
CSF1YLR087C TIP1P27654 210 aaPredicted RBP2□□□□□ -2.09
CSF1YLR087C HOT13P36078 116 aa2□□□□□ -2.09
CSF1YLR087C PFA3P42836 336 aa2□□□□□ -2.09
CSF1YLR087C RPL9BP51401 191 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C MCT1Q12283 360 aa2□□□□□ -2.09
CSF1YLR087C YMR31P19955 123 aa2□□□□□ -2.09
CSF1YLR087C YMC1P32331 307 aa2□□□□□ -2.09
CSF1YLR087C MF(ALPHA)2P32435 120 aa2□□□□□ -2.09
CSF1YLR087C ATO2P32907 282 aa2□□□□□ -2.09
CSF1YLR087C YPL073CP40323 161 aa2□□□□□ -2.09
CSF1YLR087C YJL171CP46992 396 aa2□□□□□ -2.09
CSF1YLR087C MET31Q03081 177 aa2□□□□□ -2.09
CSF1YLR087C CDC43P18898 376 aa2□□□□□ -2.09
CSF1YLR087C IZH3Q07959 543 aa2□□□□□ -2.09
CSF1YLR087C VTS1Q08831 523 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
CSF1YLR087C DET1Q99288 334 aaKnown RBP2□□□□□ -2.09
CSF1YLR087C DCG1P32460 244 aa1.99□□□□□ -2.09
CSF1YLR087C SPS18P32572 300 aa1.99□□□□□ -2.09
CSF1YLR087C YPL080CQ02826 108 aa1.99□□□□□ -2.09
CSF1YLR087C RUB1Q03919 77 aa1.99□□□□□ -2.09
CSF1YLR087C YLR224WQ05947 369 aa1.99□□□□□ -2.09
CSF1YLR087C ECM12O13529 151 aa1.99□□□□□ -2.09
CSF1YLR087C PAI3P01094 68 aa1.99□□□□□ -2.09
CSF1YLR087C YOL162WP0CF19 215 aa1.99□□□□□ -2.09
CSF1YLR087C MRP21P38175 177 aa1.99□□□□□ -2.09
CSF1YLR087C FHN1P53279 174 aa1.99□□□□□ -2.09
CSF1YLR087C BET5Q03630 159 aa1.99□□□□□ -2.09
CSF1YLR087C PCL9Q12477 304 aa1.99□□□□□ -2.09
CSF1YLR087C YPL038W-AQ3E7B4 63 aa1.99□□□□□ -2.09
CSF1YLR087C RPS17AP02407 136 aaKnown RBP1.99□□□□□ -2.09
CSF1YLR087C RPS17BP14127 136 aaKnown RBP1.99□□□□□ -2.09
CSF1YLR087C TY1A-MR1Q04215 440 aa1.99□□□□□ -2.09
CSF1YLR087C TY1A-BLQ12266 440 aa1.99□□□□□ -2.09
CSF1YLR087C YPS3Q12303 508 aa1.99□□□□□ -2.09
CSF1YLR087C SCEIP03882 235 aa1.99□□□□□ -2.09
CSF1YLR087C SMP1P38128 452 aa1.99□□□□□ -2.09
CSF1YLR087C SVP26P38869 228 aa1.99□□□□□ -2.09
CSF1YLR087C YIL077CP40508 320 aa1.99□□□□□ -2.09
CSF1YLR087C GLO1P50107 326 aa1.99□□□□□ -2.09
CSF1YLR087C DUG3P53871 357 aa1.99□□□□□ -2.09
CSF1YLR087C AIR2Q12476 344 aaKnown RBP1.99□□□□□ -2.09
CSF1YLR087C TIF6Q12522 245 aaKnown RBP1.99□□□□□ -2.09
CSF1YLR087C MRS1P07266 363 aa1.99□□□□□ -2.09
CSF1YLR087C PSD1P39006 500 aa1.99□□□□□ -2.09
CSF1YLR087C IZH2Q12442 317 aa1.99□□□□□ -2.09
CSF1YLR087C COX19Q3E731 98 aa1.99□□□□□ -2.09
CSF1YLR087C CPA1P07258 411 aaKnown RBP1.99□□□□□ -2.09
CSF1YLR087C RCR1P38212 213 aa1.99□□□□□ -2.09
CSF1YLR087C TEM1P38987 245 aa1.99□□□□□ -2.09
CSF1YLR087C NRD1P53617 575 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
CSF1YLR087C PRO1P32264 428 aa1.98□□□□□ -2.09
CSF1YLR087C REC104P33323 182 aa1.98□□□□□ -2.09
CSF1YLR087C YHL042WP38729 150 aa1.98□□□□□ -2.09
CSF1YLR087C YJL218WP40892 196 aaKnown RBP1.98□□□□□ -2.09
CSF1YLR087C RIM9Q04734 239 aa1.98□□□□□ -2.09
CSF1YLR087C PAL1Q05518 499 aaKnown RBP1.98□□□□□ -2.09
CSF1YLR087C ERG24P32462 438 aaKnown RBP1.98□□□□□ -2.09
CSF1YLR087C PFS2P42841 465 aaKnown RBP1.98□□□□□ -2.09
CSF1YLR087C YMR295CQ03559 197 aa1.98□□□□□ -2.09
CSF1YLR087C YDL086WQ07505 273 aa1.98□□□□□ -2.09
CSF1YLR087C YOR343CQ12484 108 aa1.98□□□□□ -2.09
CSF1YLR087C Q0182Q9ZZW1 134 aa1.98□□□□□ -2.09
CSF1YLR087C CSH1P38287 376 aa1.98□□□□□ -2.09
CSF1YLR087C COX18P53239 316 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms