RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W ACC1Q00955 2233 aaKnown RBP5.4□□□□□ -1.55
GEF1YJR040W NNK1P36003 928 aa5.4□□□□□ -1.55
GEF1YJR040W MSL1P40567 111 aaPredicted RBP5.4□□□□□ -1.55
GEF1YJR040W YJR015WP47090 510 aa5.4□□□□□ -1.55
GEF1YJR040W ELC1Q03071 99 aa5.4□□□□□ -1.55
GEF1YJR040W COQ11Q05892 277 aa5.4□□□□□ -1.55
GEF1YJR040W ERF2Q06551 359 aa5.4□□□□□ -1.55
GEF1YJR040W FRE8Q12209 686 aa5.4□□□□□ -1.55
GEF1YJR040W YOS1Q3E834 85 aa5.4□□□□□ -1.55
GEF1YJR040W HUG1Q6Q5K6 68 aa5.4□□□□□ -1.55
GEF1YJR040W FLO9P39712 1322 aa5.39□□□□□ -1.55
GEF1YJR040W ADH1P00330 348 aaKnown RBP5.39□□□□□ -1.55
GEF1YJR040W PAM17P36147 197 aa5.39□□□□□ -1.55
GEF1YJR040W PSD1P39006 500 aa5.39□□□□□ -1.55
GEF1YJR040W XPT1P47165 209 aa5.39□□□□□ -1.55
GEF1YJR040W COX18P53239 316 aa5.39□□□□□ -1.55
GEF1YJR040W ATO3Q12359 275 aa5.39□□□□□ -1.55
GEF1YJR040W RPL30P14120 105 aaKnown RBP5.39□□□□□ -1.55
GEF1YJR040W MDH2P22133 377 aa5.39□□□□□ -1.55
GEF1YJR040W VMA3P25515 160 aa5.39□□□□□ -1.55
GEF1YJR040W YBR184WP38299 523 aa5.39□□□□□ -1.55
GEF1YJR040W POP2P39008 433 aa5.39□□□□□ -1.55
GEF1YJR040W YDR286CQ05530 114 aa5.39□□□□□ -1.55
GEF1YJR040W YLR363W-AQ3E747 85 aa5.39□□□□□ -1.55
GEF1YJR040W YLR365WQ7LIF2 110 aa5.39□□□□□ -1.55
GEF1YJR040W TOR1P35169 2470 aa5.38□□□□□ -1.55
GEF1YJR040W MRPL39P36533 70 aa5.38□□□□□ -1.55
GEF1YJR040W ECM33P38248 429 aaKnown RBP5.38□□□□□ -1.55
GEF1YJR040W PCP1P53259 346 aa5.38□□□□□ -1.55
GEF1YJR040W YOR105WQ08504 108 aa5.38□□□□□ -1.55
GEF1YJR040W YOR186WQ08560 144 aa5.38□□□□□ -1.55
GEF1YJR040W ERV1P27882 189 aa5.37□□□□□ -1.55
GEF1YJR040W RPB7P34087 171 aa5.37□□□□□ -1.55
GEF1YJR040W SOR1P35497 357 aaKnown RBP5.37□□□□□ -1.55
GEF1YJR040W GPP2P40106 250 aaKnown RBP5.37□□□□□ -1.55
GEF1YJR040W YJL163CP46996 555 aa5.37□□□□□ -1.55
GEF1YJR040W YNR048WP53740 393 aa5.37□□□□□ -1.55
GEF1YJR040W SOR2Q07786 357 aa5.37□□□□□ -1.55
GEF1YJR040W RKI1Q12189 258 aa5.37□□□□□ -1.55
GEF1YJR040W ATP10P18496 279 aa5.37□□□□□ -1.55
GEF1YJR040W YKR070WP36151 352 aaKnown RBP5.37□□□□□ -1.55
GEF1YJR040W PRY1P47032 299 aa5.37□□□□□ -1.55
GEF1YJR040W PRP11Q07350 266 aaPredicted RBP5.37□□□□□ -1.55
GEF1YJR040W LDS2Q08218 356 aa5.37□□□□□ -1.55
GEF1YJR040W YPR108W-AQ3E7B3 70 aa5.37□□□□□ -1.55
GEF1YJR040W CDC43P18898 376 aa5.36□□□□□ -1.55
GEF1YJR040W YKL107WP34251 309 aa5.36□□□□□ -1.55
GEF1YJR040W ICS2P38284 255 aa5.36□□□□□ -1.55
GEF1YJR040W CRH1P53301 507 aa5.36□□□□□ -1.55
GEF1YJR040W BOR1P53838 576 aa5.36□□□□□ -1.55
GEF1YJR040W YOL118CQ08259 102 aa5.36□□□□□ -1.55
GEF1YJR040W ALG6Q12001 544 aaKnown RBP5.36□□□□□ -1.55
GEF1YJR040W YOR192C-CQ3E736 78 aa5.36□□□□□ -1.55
GEF1YJR040W SWD3P38123 315 aa5.36□□□□□ -1.55
GEF1YJR040W GPI2P46961 280 aa5.36□□□□□ -1.55
GEF1YJR040W CAB4P53332 305 aa5.36□□□□□ -1.55
GEF1YJR040W ARC18Q05933 178 aaKnown RBP5.36□□□□□ -1.55
GEF1YJR040W YFH1Q07540 174 aa5.36□□□□□ -1.55
GEF1YJR040W PAM18Q07914 168 aa5.36□□□□□ -1.55
GEF1YJR040W UTP23Q12339 254 aaKnown RBP5.36□□□□□ -1.55
GEF1YJR040W GLT1Q12680 2145 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W YDR157WA0A023PZE8 133 aa5.35□□□□□ -1.55
GEF1YJR040W HYP2P23301 157 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W RAD23P32628 398 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W YIL012WP40551 113 aa5.35□□□□□ -1.55
GEF1YJR040W YNL092WP53934 400 aa5.35□□□□□ -1.55
GEF1YJR040W GRH1Q04410 372 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W SWT1Q12104 458 aa5.35□□□□□ -1.55
GEF1YJR040W USV1Q12132 391 aa5.35□□□□□ -1.55
GEF1YJR040W YDL180WQ12301 547 aa5.35□□□□□ -1.55
GEF1YJR040W YBR255C-AQ3E776 120 aa5.35□□□□□ -1.55
GEF1YJR040W BLM10P43583 2143 aa5.35□□□□□ -1.55
GEF1YJR040W GCN1P33892 2672 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W SOD1P00445 154 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W SEC4P07560 215 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W RPS16AP0CX51 143 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W RPS16BP0CX52 143 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W SRP14P38985 146 aa5.35□□□□□ -1.55
GEF1YJR040W YNR040WP53736 256 aa5.35□□□□□ -1.55
GEF1YJR040W LPP1Q04396 274 aa5.35□□□□□ -1.55
GEF1YJR040W YPL264CQ08980 353 aa5.35□□□□□ -1.55
GEF1YJR040W SMT3Q12306 101 aaKnown RBP5.35□□□□□ -1.55
GEF1YJR040W YDL218WQ07629 317 aa5.34□□□□□ -1.55
GEF1YJR040W THI72Q08579 599 aa5.34□□□□□ -1.55
GEF1YJR040W RPS22AP0C0W1 130 aaKnown RBP5.34□□□□□ -1.56
GEF1YJR040W INO4P13902 151 aa5.34□□□□□ -1.56
GEF1YJR040W HNT2P49775 206 aa5.34□□□□□ -1.56
GEF1YJR040W EOS1P53938 366 aa5.34□□□□□ -1.56
GEF1YJR040W YOL029CQ08187 201 aa5.34□□□□□ -1.56
GEF1YJR040W NCE102Q12207 173 aaRIP-Chip data5.34□□□□□ -1.56not detected
GEF1YJR040W CUP2P15315 225 aa5.33□□□□□ -1.56
GEF1YJR040W FCY2P17064 533 aa5.33□□□□□ -1.56
GEF1YJR040W FYV4P38783 130 aaPredicted RBP5.33□□□□□ -1.56
GEF1YJR040W YER079WP40052 210 aaKnown RBP5.33□□□□□ -1.56
GEF1YJR040W PCL7P40186 285 aa5.33□□□□□ -1.56
GEF1YJR040W YIL163CP40448 117 aa5.33□□□□□ -1.56
GEF1YJR040W GEP7P53171 287 aa5.33□□□□□ -1.56
GEF1YJR040W YMR007WQ03675 126 aa5.33□□□□□ -1.56
GEF1YJR040W PRM3Q08931 133 aa5.33□□□□□ -1.56
GEF1YJR040W USB1Q12208 290 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms