RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	TRM3	Q07527	1436 aa		0.82	□□□□□ -2.28
NUP82	YJL061W	YHL037C	P38733	133 aa		0.81	□□□□□ -2.28
NUP82	YJL061W	YEL073C	P39974	107 aa		0.81	□□□□□ -2.28
NUP82	YJL061W	PAC10	P48363	199 aa		0.81	□□□□□ -2.28
NUP82	YJL061W	HRD1	Q08109	551 aa		0.81	□□□□□ -2.28
NUP82	YJL061W	CMD1	P06787	147 aa	Known RBP	0.8	□□□□□ -2.28
NUP82	YJL061W	YFL051C	P43552	160 aa		0.8	□□□□□ -2.28
NUP82	YJL061W	NQM1	P53228	333 aa	Predicted RBP	0.8	□□□□□ -2.28
NUP82	YJL061W	YML079W	Q03629	201 aa		0.8	□□□□□ -2.28
NUP82	YJL061W	DUR1,2	P32528	1835 aa	Known RBP	0.8	□□□□□ -2.28
NUP82	YJL061W	YBR056W-A	I2HB52	66 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	DCV1	P43595	202 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	SYM1	Q06563	197 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	YDL157C	Q12082	118 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	RPL35A	P0CX84	120 aa	Known RBP	0.79	□□□□□ -2.28
NUP82	YJL061W	RPL35B	P0CX85	120 aa	Known RBP	0.79	□□□□□ -2.28
NUP82	YJL061W	VPS51	P36116	164 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	YIL102C	P40488	101 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	YNL140C	P53910	189 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	TMA20	P89886	181 aa	Predicted RBP	0.79	□□□□□ -2.28
NUP82	YJL061W	THI74	Q04083	370 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	SAC3	P46674	1301 aa		0.79	□□□□□ -2.28
NUP82	YJL061W	PRE1	P22141	198 aa	Known RBP	0.78	□□□□□ -2.28
NUP82	YJL061W	YAR064W	P39563	99 aa		0.78	□□□□□ -2.28
NUP82	YJL061W	YEL028W	P39989	153 aa		0.78	□□□□□ -2.28
NUP82	YJL061W	YGR269W	P40326	108 aa		0.78	□□□□□ -2.28
NUP82	YJL061W	UGX2	P32772	223 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	CSH1	P38287	376 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	YGL230C	P53074	147 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	LIP1	Q03579	150 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	CHD1	P32657	1468 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	SPS2	P08459	502 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	UBC6	P33296	250 aa	Predicted RBP	0.77	□□□□□ -2.29
NUP82	YJL061W	SHB17	P36136	271 aa	Known RBP	0.77	□□□□□ -2.29
NUP82	YJL061W	YKR070W	P36151	352 aa	Known RBP	0.77	□□□□□ -2.29
NUP82	YJL061W	YJR015W	P47090	510 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	HSK3	P69852	69 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	GIM5	Q04493	163 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	UIP4	Q08926	304 aa		0.77	□□□□□ -2.29
NUP82	YJL061W	RPS25B	P0C0T4	108 aa	Known RBP	0.76	□□□□□ -2.29
NUP82	YJL061W	PTC1	P35182	281 aa		0.76	□□□□□ -2.29
NUP82	YJL061W	SRP102	P36057	244 aa	Predicted RBP	0.76	□□□□□ -2.29
NUP82	YJL061W	CCW12	Q12127	133 aa		0.76	□□□□□ -2.29
NUP82	YJL061W	RPS25A	Q3E792	108 aa	Predicted RBP	0.76	□□□□□ -2.29
NUP82	YJL061W	AVO2	Q04749	426 aa		0.76	□□□□□ -2.29
NUP82	YJL061W	ATG10	Q07879	167 aa		0.76	□□□□□ -2.29
NUP82	YJL061W	FMP49	A0A023PZB3	126 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	GEP7	P53171	287 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	YDC1	Q02896	317 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	KEI1	Q06346	221 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	CMC2	Q3E7A4	109 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	KIN28	P06242	306 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	INO4	P13902	151 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	APS3	P47064	194 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	YGL101W	P53144	215 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	MAK3	Q03503	176 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	YLR053C	Q12026	108 aa		0.74	□□□□□ -2.29
NUP82	YJL061W	YNR064C	P53750	290 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	YPR114W	Q06107	315 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	FCY1	Q12178	158 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	YLR046C	Q12253	270 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	ATP5	P09457	212 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	YPT31	P38555	223 aa	Known RBP	0.73	□□□□□ -2.29
NUP82	YJL061W	YDR476C	Q03362	224 aa		0.73	□□□□□ -2.29
NUP82	YJL061W	TAF2	P23255	1407 aa		0.72	□□□□□ -2.29
NUP82	YJL061W	YER121W	P40076	114 aa		0.72	□□□□□ -2.29
NUP82	YJL061W	CIN5	P40917	295 aa		0.72	□□□□□ -2.29
NUP82	YJL061W	TMA23	Q03525	211 aa		0.72	□□□□□ -2.29
NUP82	YJL061W	RDI1	Q12434	202 aa		0.72	□□□□□ -2.29
NUP82	YJL061W	SPT14	P32363	452 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	FES1	P38260	290 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	LSM3	P57743	89 aa	Known RBP	0.71	□□□□□ -2.3
NUP82	YJL061W	YDR102C	Q03864	110 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	YDL241W	Q07738	123 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	VAM10	Q08474	114 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	ADE6	P38972	1358 aa	Known RBP	0.71	□□□□□ -2.3
NUP82	YJL061W	HTD2	P38790	280 aa	Known RBP	0.71	□□□□□ -2.3
NUP82	YJL061W	GLC8	P41818	229 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	CCC1	P47818	322 aa		0.71	□□□□□ -2.3
NUP82	YJL061W	SPA2	P23201	1466 aa	Known RBP	0.71	□□□□□ -2.3
NUP82	YJL061W	UBI4	P0CG63	381 aa	Known RBP	0.7	□□□□□ -2.3
NUP82	YJL061W	QCR2	P07257	368 aa		0.7	□□□□□ -2.3
NUP82	YJL061W	YEL014C	P39999	101 aa		0.7	□□□□□ -2.3
NUP82	YJL061W	DLS1	P40366	167 aa		0.7	□□□□□ -2.3
NUP82	YJL061W	ORM1	P53224	222 aa		0.7	□□□□□ -2.3
NUP82	YJL061W	RIF1	P29539	1916 aa		0.69	□□□□□ -2.3
NUP82	YJL061W	YCR001W	P25347	104 aa		0.69	□□□□□ -2.3
NUP82	YJL061W	ECM31	P38122	312 aa		0.69	□□□□□ -2.3
NUP82	YJL061W	RPL30	P14120	105 aa	Known RBP	0.68	□□□□□ -2.3
NUP82	YJL061W	YBR027C	P38220	110 aa		0.68	□□□□□ -2.3
NUP82	YJL061W	NMA1	Q06178	401 aa	Known RBP	0.68	□□□□□ -2.3
NUP82	YJL061W	YPD1	Q07688	167 aa		0.68	□□□□□ -2.3
NUP82	YJL061W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.68	□□□□□ -2.3
NUP82	YJL061W	YGL193C	P53097	103 aa		0.68	□□□□□ -2.3
NUP82	YJL061W	YGL041W-A	P0C5N3	154 aa		0.67	□□□□□ -2.3
NUP82	YJL061W	APQ12	P40532	138 aa		0.67	□□□□□ -2.3
NUP82	YJL061W	FMN1	Q03778	218 aa		0.67	□□□□□ -2.3
NUP82	YJL061W	CMC4	Q3E7A9	73 aa		0.67	□□□□□ -2.3
NUP82	YJL061W	PBI2	P0CT04	75 aa	Known RBP	0.67	□□□□□ -2.3
NUP82	YJL061W	HYP2	P23301	157 aa	Known RBP	0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms