RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YLR419WQ06698 1435 aaKnown RBP1.09□□□□□ -2.23
PEP8YJL053W APA2P22108 325 aa1.09□□□□□ -2.23
PEP8YJL053W TRX3P25372 127 aa1.09□□□□□ -2.23
PEP8YJL053W TAH1P25638 111 aaPredicted RBP1.09□□□□□ -2.23
PEP8YJL053W MGT1P26188 188 aa1.09□□□□□ -2.23
PEP8YJL053W SHG1P38337 142 aa1.09□□□□□ -2.23
PEP8YJL053W HYR1P40581 163 aaKnown RBP1.09□□□□□ -2.23
PEP8YJL053W YJR111CP47148 283 aaKnown RBP1.09□□□□□ -2.23
PEP8YJL053W GIM3P53900 129 aa1.09□□□□□ -2.23
PEP8YJL053W DAD4P69851 72 aa1.09□□□□□ -2.23
PEP8YJL053W VPS71Q03433 280 aa1.09□□□□□ -2.23
PEP8YJL053W ARO80Q04052 950 aa1.09□□□□□ -2.23
PEP8YJL053W NOC4Q06512 552 aaPredicted RBP1.09□□□□□ -2.23
PEP8YJL053W YOR342CQ12182 319 aa1.09□□□□□ -2.23
PEP8YJL053W YDR034W-BQ6Q5X2 51 aa1.09□□□□□ -2.23
PEP8YJL053W TY3B-IQ7LHG5 1498 aaKnown RBP1.09□□□□□ -2.24
PEP8YJL053W GCN2P15442 1659 aa1.09□□□□□ -2.24
PEP8YJL053W ACC1Q00955 2233 aaKnown RBP1.08□□□□□ -2.24
PEP8YJL053W NSP1P14907 823 aaKnown RBP1.08□□□□□ -2.24
PEP8YJL053W PHO85P17157 305 aa1.08□□□□□ -2.24
PEP8YJL053W SFK1P35735 353 aa1.08□□□□□ -2.24
PEP8YJL053W FMP23P38231 175 aa1.08□□□□□ -2.24
PEP8YJL053W YHL042WP38729 150 aa1.08□□□□□ -2.24
PEP8YJL053W NSG1P38837 291 aa1.08□□□□□ -2.24
PEP8YJL053W GRX5Q02784 150 aa1.08□□□□□ -2.24
PEP8YJL053W SEC16P48415 2195 aaKnown RBP1.07□□□□□ -2.24
PEP8YJL053W ADE1P27616 306 aa1.07□□□□□ -2.24
PEP8YJL053W ARO7P32178 256 aa1.07□□□□□ -2.24
PEP8YJL053W GSP2P32836 220 aaKnown RBP1.07□□□□□ -2.24
PEP8YJL053W PAM17P36147 197 aa1.07□□□□□ -2.24
PEP8YJL053W YHL018WP38744 120 aaPredicted RBP1.07□□□□□ -2.24
PEP8YJL053W HPA3P39979 161 aa1.07□□□□□ -2.24
PEP8YJL053W SOK1P40317 901 aa1.07□□□□□ -2.24
PEP8YJL053W FMP32P43557 207 aa1.07□□□□□ -2.24
PEP8YJL053W YNL033WP53964 284 aa1.07□□□□□ -2.24
PEP8YJL053W AIM34Q03673 198 aa1.07□□□□□ -2.24
PEP8YJL053W YMR007WQ03675 126 aa1.07□□□□□ -2.24
PEP8YJL053W YMR253CQ04835 414 aa1.07□□□□□ -2.24
PEP8YJL053W YPR013CQ12145 317 aa1.07□□□□□ -2.24
PEP8YJL053W YLR412C-AQ3E742 68 aa1.07□□□□□ -2.24
PEP8YJL053W COX8P04039 78 aa1.06□□□□□ -2.24
PEP8YJL053W RPL40AP0CH08 128 aaKnown RBP1.06□□□□□ -2.24
PEP8YJL053W RPL40BP0CH09 128 aaKnown RBP1.06□□□□□ -2.24
PEP8YJL053W TIR1P10863 254 aa1.06□□□□□ -2.24
PEP8YJL053W SPC25P40014 221 aa1.06□□□□□ -2.24
PEP8YJL053W YFL019CP43576 117 aa1.06□□□□□ -2.24
PEP8YJL053W YFH7P43591 353 aa1.06□□□□□ -2.24
PEP8YJL053W ALB1P47019 175 aaPredicted RBP1.06□□□□□ -2.24
PEP8YJL053W PGA1P53896 198 aa1.06□□□□□ -2.24
PEP8YJL053W NRK1P53915 240 aa1.06□□□□□ -2.24
PEP8YJL053W UPS3Q04006 179 aa1.06□□□□□ -2.24
PEP8YJL053W NAT3Q06504 195 aa1.06□□□□□ -2.24
PEP8YJL053W SEC7P11075 2009 aaKnown RBP1.06□□□□□ -2.24
PEP8YJL053W RPO41P13433 1351 aaKnown RBP1.06□□□□□ -2.24
PEP8YJL053W YLR422WQ06409 1932 aa1.05□□□□□ -2.24
PEP8YJL053W NUP192P47054 1683 aa1.05□□□□□ -2.24
PEP8YJL053W IDP1P21954 428 aaKnown RBP1.05□□□□□ -2.24
PEP8YJL053W SEC14P24280 304 aaKnown RBP1.05□□□□□ -2.24
PEP8YJL053W ATP7P30902 174 aa1.05□□□□□ -2.24
PEP8YJL053W RPB7P34087 171 aa1.05□□□□□ -2.24
PEP8YJL053W YFL065CP43539 102 aa1.05□□□□□ -2.24
PEP8YJL053W THG1P53215 237 aaKnown RBP1.05□□□□□ -2.24
PEP8YJL053W RNH202Q05635 350 aa1.05□□□□□ -2.24
PEP8YJL053W GRX8Q05926 109 aa1.05□□□□□ -2.24
PEP8YJL053W SHH4Q06236 168 aa1.05□□□□□ -2.24
PEP8YJL053W MPD1Q12404 318 aaKnown RBP1.05□□□□□ -2.24
PEP8YJL053W SEN1Q00416 2231 aaKnown RBP1.05□□□□□ -2.24
PEP8YJL053W SNF2P22082 1703 aa1.04□□□□□ -2.24
PEP8YJL053W YEL067CP39978 195 aa1.04□□□□□ -2.24
PEP8YJL053W NSA2P40078 261 aaKnown RBP1.04□□□□□ -2.24
PEP8YJL053W DIG2Q03373 323 aaKnown RBP1.04□□□□□ -2.24
PEP8YJL053W HPT1Q04178 221 aaKnown RBP1.04□□□□□ -2.24
PEP8YJL053W YMR252CQ04814 134 aa1.04□□□□□ -2.24
PEP8YJL053W FIT2Q08906 153 aa1.04□□□□□ -2.24
PEP8YJL053W YOR015WQ12169 119 aa1.04□□□□□ -2.24
PEP8YJL053W LYS2P07702 1392 aa1.04□□□□□ -2.24
PEP8YJL053W GCY1P14065 312 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
PEP8YJL053W YCR023CP25351 611 aa1.03□□□□□ -2.24
PEP8YJL053W AHC2P25649 128 aa1.03□□□□□ -2.24
PEP8YJL053W SEC72P39742 193 aaKnown RBP1.03□□□□□ -2.24
PEP8YJL053W GPI14P47088 403 aaKnown RBP1.03□□□□□ -2.24
PEP8YJL053W SNO1Q03144 224 aa1.03□□□□□ -2.24
PEP8YJL053W PIR1Q03178 341 aa1.03□□□□□ -2.24
PEP8YJL053W RRP17Q04031 235 aaPredicted RBP1.03□□□□□ -2.24
PEP8YJL053W AQY2P0CD90 149 aa1.02□□□□□ -2.25
PEP8YJL053W YHR212W-AP0CX91 67 aa1.02□□□□□ -2.25
PEP8YJL053W STP22P25604 385 aa1.02□□□□□ -2.25
PEP8YJL053W TRR1P29509 319 aaKnown RBP1.02□□□□□ -2.25
PEP8YJL053W YRF1-2P40105 1681 aa1.02□□□□□ -2.25
PEP8YJL053W SAC3P46674 1301 aa1.02□□□□□ -2.25
PEP8YJL053W SBH1P52870 82 aa1.02□□□□□ -2.25
PEP8YJL053W JAC1P53193 184 aa1.02□□□□□ -2.25
PEP8YJL053W GPI17Q04080 534 aa1.02□□□□□ -2.25
PEP8YJL053W BRX1Q08235 291 aaKnown RBP1.02□□□□□ -2.25
PEP8YJL053W GRE1Q08969 168 aa1.02□□□□□ -2.25
PEP8YJL053W DAS2Q12084 232 aa1.02□□□□□ -2.25
PEP8YJL053W DGK1Q12382 290 aa1.02□□□□□ -2.25
PEP8YJL053W DUR1,2P32528 1835 aaKnown RBP1.01□□□□□ -2.25
PEP8YJL053W STF2P16965 84 aa1.01□□□□□ -2.25
PEP8YJL053W YCL042WP25572 119 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms