RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W POR2P40478 281 aa4.55□□□□□ -1.68
PRE3YJL001W SER2P42941 309 aa4.55□□□□□ -1.68
PRE3YJL001W IRC18P47056 224 aa4.55□□□□□ -1.68
PRE3YJL001W ATG5Q12380 294 aa4.55□□□□□ -1.68
PRE3YJL001W ECM25P32525 599 aa4.54□□□□□ -1.68
PRE3YJL001W POP8P38208 133 aa4.54□□□□□ -1.68
PRE3YJL001W CWC23P52868 283 aaPredicted RBP4.54□□□□□ -1.68
PRE3YJL001W EST3Q03096 181 aa4.54□□□□□ -1.68
PRE3YJL001W RTT103Q05543 409 aa4.54□□□□□ -1.68
PRE3YJL001W YOR385WQ08909 290 aa4.54□□□□□ -1.68
PRE3YJL001W ATG31Q12421 196 aa4.54□□□□□ -1.68
PRE3YJL001W RRT1P38192 103 aa4.53□□□□□ -1.68
PRE3YJL001W LSM12P38828 187 aaKnown RBP4.53□□□□□ -1.68
PRE3YJL001W SNU13P39990 126 aaKnown RBP4.53□□□□□ -1.68
PRE3YJL001W YJL027CP47063 138 aaPredicted RBP4.53□□□□□ -1.68
PRE3YJL001W IPI1P38803 334 aaPredicted RBP4.52□□□□□ -1.69
PRE3YJL001W AIM25P47140 327 aa4.52□□□□□ -1.69
PRE3YJL001W YGR050CP53231 118 aa4.52□□□□□ -1.69
PRE3YJL001W GIM3P53900 129 aa4.52□□□□□ -1.69
PRE3YJL001W DYN2Q02647 92 aa4.52□□□□□ -1.69
PRE3YJL001W PAM18Q07914 168 aa4.52□□□□□ -1.69
PRE3YJL001W TFB5Q3E7C1 72 aaPredicted RBP4.52□□□□□ -1.69
PRE3YJL001W POP5P28005 173 aa4.51□□□□□ -1.69
PRE3YJL001W UTP11P34247 250 aaPredicted RBP4.51□□□□□ -1.69
PRE3YJL001W PAN3P36102 679 aaPredicted RBP4.51□□□□□ -1.69
PRE3YJL001W MRPL4P36517 319 aa4.51□□□□□ -1.69
PRE3YJL001W YBL071CP38185 102 aa4.51□□□□□ -1.69
PRE3YJL001W COS8P38723 381 aa4.51□□□□□ -1.69
PRE3YJL001W LSM1P47017 172 aaKnown RBP4.51□□□□□ -1.69
PRE3YJL001W HTZ1Q12692 134 aaKnown RBP4.51□□□□□ -1.69
PRE3YJL001W QCR2P07257 368 aa4.5□□□□□ -1.69
PRE3YJL001W TAL1P15019 335 aaKnown RBP4.5□□□□□ -1.69
PRE3YJL001W YCR022CP25620 114 aa4.5□□□□□ -1.69
PRE3YJL001W SPT14P32363 452 aa4.5□□□□□ -1.69
PRE3YJL001W UPS2P35200 230 aa4.5□□□□□ -1.69
PRE3YJL001W GAT4P40569 121 aa4.5□□□□□ -1.69
PRE3YJL001W TPN1P53099 579 aa4.5□□□□□ -1.69
PRE3YJL001W YGR018CP53211 109 aa4.5□□□□□ -1.69
PRE3YJL001W LSM7P53905 115 aaKnown RBP4.5□□□□□ -1.69
PRE3YJL001W LDS2Q08218 356 aa4.5□□□□□ -1.69
PRE3YJL001W PRM4Q12498 284 aa4.5□□□□□ -1.69
PRE3YJL001W SNF11P38956 169 aa4.49□□□□□ -1.69
PRE3YJL001W GLE2P40066 365 aa4.49□□□□□ -1.69
PRE3YJL001W NSA2P40078 261 aaKnown RBP4.49□□□□□ -1.69
PRE3YJL001W HAL1Q01766 294 aa4.49□□□□□ -1.69
PRE3YJL001W ODC1Q03028 310 aa4.49□□□□□ -1.69
PRE3YJL001W YPS3Q12303 508 aa4.49□□□□□ -1.69
PRE3YJL001W PAA1Q12447 191 aaKnown RBP4.49□□□□□ -1.69
PRE3YJL001W YOR011W-AQ3E807 68 aa4.49□□□□□ -1.69
PRE3YJL001W URA5P13298 226 aaKnown RBP4.48□□□□□ -1.69
PRE3YJL001W ERV15P38312 142 aa4.48□□□□□ -1.69
PRE3YJL001W BFR1P38934 470 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
PRE3YJL001W YGR025WP53216 100 aa4.48□□□□□ -1.69
PRE3YJL001W YMR244WQ04018 355 aa4.48□□□□□ -1.69
PRE3YJL001W FRQ1Q06389 190 aa4.48□□□□□ -1.69
PRE3YJL001W MRP17P28778 131 aa4.47□□□□□ -1.69
PRE3YJL001W AVT5P38176 459 aa4.47□□□□□ -1.69
PRE3YJL001W BDH1P39714 382 aa4.47□□□□□ -1.69
PRE3YJL001W GPI2P46961 280 aa4.47□□□□□ -1.69
PRE3YJL001W RDI1Q12434 202 aa4.47□□□□□ -1.69
PRE3YJL001W PRM7Q12459 698 aa4.47□□□□□ -1.69
PRE3YJL001W YHR213WP0CI67 198 aa4.46□□□□□ -1.7
PRE3YJL001W YCR016WP25617 290 aaKnown RBP4.46□□□□□ -1.7
PRE3YJL001W CSH1P38287 376 aa4.46□□□□□ -1.7
PRE3YJL001W VMA22P38784 181 aa4.46□□□□□ -1.7
PRE3YJL001W RPR2P40571 144 aa4.46□□□□□ -1.7
PRE3YJL001W IMP2P46972 177 aa4.46□□□□□ -1.7
PRE3YJL001W LCB3P47013 409 aa4.46□□□□□ -1.7
PRE3YJL001W NIF3P53081 288 aa4.46□□□□□ -1.7
PRE3YJL001W HCH1P53834 153 aa4.46□□□□□ -1.7
PRE3YJL001W GPI15P53961 229 aa4.46□□□□□ -1.7
PRE3YJL001W MRPS8Q03799 155 aa4.46□□□□□ -1.7
PRE3YJL001W VAM10Q08474 114 aa4.46□□□□□ -1.7
PRE3YJL001W AYT1Q12226 474 aa4.46□□□□□ -1.7
PRE3YJL001W YNL146C-AQ3E7Z1 64 aa4.46□□□□□ -1.7
PRE3YJL001W TIP1P27654 210 aaPredicted RBP4.45□□□□□ -1.7
PRE3YJL001W YIP3P53633 176 aa4.45□□□□□ -1.7
PRE3YJL001W BET5Q03630 159 aa4.45□□□□□ -1.7
PRE3YJL001W ERP1Q05359 219 aaKnown RBP4.45□□□□□ -1.7
PRE3YJL001W YCT1Q12235 531 aa4.45□□□□□ -1.7
PRE3YJL001W POC4Q12245 148 aaPredicted RBP4.45□□□□□ -1.7
PRE3YJL001W CDC7P06243 507 aa4.44□□□□□ -1.7
PRE3YJL001W SPS2P08459 502 aa4.44□□□□□ -1.7
PRE3YJL001W NHP6BP11633 99 aaKnown RBP4.44□□□□□ -1.7
PRE3YJL001W MRPL3P36516 390 aa4.44□□□□□ -1.7
PRE3YJL001W RTC3P38804 111 aaPredicted RBP4.44□□□□□ -1.7
PRE3YJL001W YKE4P40544 346 aa4.44□□□□□ -1.7
PRE3YJL001W YIR035CP40579 254 aa4.44□□□□□ -1.7
PRE3YJL001W VPS28Q02767 242 aa4.44□□□□□ -1.7
PRE3YJL001W SGF11Q03067 99 aa4.44□□□□□ -1.7
PRE3YJL001W PIS1P06197 220 aaKnown RBP4.43□□□□□ -1.7
PRE3YJL001W FPR2P32472 135 aa4.43□□□□□ -1.7
PRE3YJL001W YKL162CP36052 402 aa4.43□□□□□ -1.7
PRE3YJL001W MIG3P39943 394 aa4.43□□□□□ -1.7
PRE3YJL001W SNX4P47057 423 aa4.43□□□□□ -1.7
PRE3YJL001W LST7P53237 242 aa4.43□□□□□ -1.7
PRE3YJL001W TPI1P00942 248 aaKnown RBP4.42□□□□□ -1.7
PRE3YJL001W YCR001WP25347 104 aa4.42□□□□□ -1.7
PRE3YJL001W SUA5P32579 426 aa4.42□□□□□ -1.7
PRE3YJL001W YER135CP40082 130 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms