RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	LAC1	P28496	418 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	MBA1	P38300	278 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	WSS1	P38838	269 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	SNX4	P47057	423 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	UBC7	Q02159	165 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	SPO19	Q03029	223 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	SDH7	Q04401	133 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	YOR385W	Q08909	290 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	YPL162C	Q12042	273 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	PRM7	Q12459	698 aa		2.71	□□□□□ -1.98
SGN1	YIR001C	TMA7	Q3E764	64 aa	Known RBP	2.71	□□□□□ -1.98
SGN1	YIR001C	MRP17	P28778	131 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	PHD1	P36093	366 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	CSH1	P38287	376 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	BDH1	P39714	382 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	YER135C	P40082	130 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	SER2	P42941	309 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	YJL027C	P47063	138 aa	Predicted RBP	2.7	□□□□□ -1.98
SGN1	YIR001C	MCM22	P47167	239 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	MSO1	P53604	210 aa	Known RBP	2.7	□□□□□ -1.98
SGN1	YIR001C	VPS28	Q02767	242 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	YMR244W	Q04018	355 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	LOA1	Q06508	300 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	POS5	Q06892	414 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	VAM10	Q08474	114 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	YPS3	Q12303	508 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	SCM3	Q12334	223 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	RDI1	Q12434	202 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	YNL146C-A	Q3E7Z1	64 aa		2.7	□□□□□ -1.98
SGN1	YIR001C	SAL1	D6W196	494 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	PIS1	P06197	220 aa	Known RBP	2.69	□□□□□ -1.98
SGN1	YIR001C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
SGN1	YIR001C	YCR022C	P25620	114 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	IES5	P40060	125 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	YIR035C	P40579	254 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	HXT14	P42833	540 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	YGR018C	P53211	109 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	LST7	P53237	242 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	MRPS8	Q03799	155 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	FRQ1	Q06389	190 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	YCT1	Q12235	531 aa		2.69	□□□□□ -1.98
SGN1	YIR001C	CDC7	P06243	507 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	RPS11A	P0CX47	156 aa	Known RBP	2.68	□□□□□ -1.98
SGN1	YIR001C	RPS11B	P0CX48	156 aa	Known RBP	2.68	□□□□□ -1.98
SGN1	YIR001C	SEC22	P22214	214 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	FPR2	P32472	135 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	MIG3	P39943	394 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	LCB3	P47013	409 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	YGR025W	P53216	100 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	ODC1	Q03028	310 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	YPR063C	Q12160	140 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	POC4	Q12245	148 aa	Predicted RBP	2.68	□□□□□ -1.98
SGN1	YIR001C	NKP1	Q12493	238 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	YCR075W-A	Q3E830	75 aa		2.68	□□□□□ -1.98
SGN1	YIR001C	RPS25B	P0C0T4	108 aa	Known RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	YHR213W	P0CI67	198 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	RPL2A	P0CX45	254 aa	Known RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	RPL2B	P0CX46	254 aa	Known RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	FCY2	P17064	533 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	SUA5	P32579	426 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	TIR2	P33890	251 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	YKL162C	P36052	402 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	YJR015W	P47090	510 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	NIF3	P53081	288 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	ORM1	P53224	222 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	HCH1	P53834	153 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	PDR17	P53844	350 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	LSM7	P53905	115 aa	Known RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	YMR090W	Q04304	227 aa	Known RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	YPR195C	Q06594	109 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	YOL160W	Q08321	113 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	IES3	Q12345	250 aa		2.67	□□□□□ -1.98
SGN1	YIR001C	RPS25A	Q3E792	108 aa	Predicted RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.67	□□□□□ -1.98
SGN1	YIR001C	TPI1	P00942	248 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	MRP2	P10663	115 aa	Predicted RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	ANB1	P19211	157 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	YCR016W	P25617	290 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	IPI1	P38803	334 aa	Predicted RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	GLE2	P40066	365 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	YNL200C	P40165	246 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	RPL13B	P40212	199 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	HST4	P53688	370 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	YIF1	P53845	314 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	FMP41	P53889	259 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	IZH1	Q03419	316 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	YPL264C	Q08980	353 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	ERV2	Q12284	196 aa		2.66	□□□□□ -1.98
SGN1	YIR001C	AIM45	Q12480	344 aa	Known RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	RPL13A	Q12690	199 aa	Predicted RBP	2.66	□□□□□ -1.98
SGN1	YIR001C	YMR316C-A	I2HB70	103 aa		2.65	□□□□□ -1.99
SGN1	YIR001C	SFT2	P38166	215 aa		2.65	□□□□□ -1.99
SGN1	YIR001C	CDC40	P40968	455 aa	Predicted RBP	2.65	□□□□□ -1.99
SGN1	YIR001C	AYT1	Q12226	474 aa		2.65	□□□□□ -1.99
SGN1	YIR001C	VMA16	P23968	213 aa		2.64	□□□□□ -1.99
SGN1	YIR001C	EMP24	P32803	203 aa	Known RBP	2.64	□□□□□ -1.99
SGN1	YIR001C	PPQ1	P32945	549 aa		2.64	□□□□□ -1.99
SGN1	YIR001C	SHB17	P36136	271 aa	Known RBP	2.64	□□□□□ -1.99
SGN1	YIR001C	IRC22	P40006	225 aa		2.64	□□□□□ -1.99
SGN1	YIR001C	PRE5	P40302	234 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms