RNA–Protein interactions for RNA: YHR141C

RPL42B, Transcript of Ribosomal 60S subunit protein L42B, yeastyeast

Gene RPL42B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL42BYHR141C SHB17P36136 271 aaKnown RBP0.71□□□□□ -2.3
RPL42BYHR141C CSH1P38287 376 aa0.71□□□□□ -2.3
RPL42BYHR141C GLC8P41818 229 aa0.71□□□□□ -2.3
RPL42BYHR141C DCV1P43595 202 aa0.71□□□□□ -2.3
RPL42BYHR141C TIM13P53299 105 aa0.71□□□□□ -2.3
RPL42BYHR141C THI74Q04083 370 aa0.71□□□□□ -2.3
RPL42BYHR141C GIM5Q04493 163 aa0.71□□□□□ -2.3
RPL42BYHR141C PEX11Q12462 236 aa0.71□□□□□ -2.3
RPL42BYHR141C CHD1P32657 1468 aa0.7□□□□□ -2.3
RPL42BYHR141C RAD6P06104 172 aa0.7□□□□□ -2.3
RPL42BYHR141C CMD1P06787 147 aaKnown RBP0.7□□□□□ -2.3
RPL42BYHR141C SPS2P08459 502 aa0.7□□□□□ -2.3
RPL42BYHR141C INO4P13902 151 aa0.7□□□□□ -2.3
RPL42BYHR141C VPS51P36116 164 aa0.7□□□□□ -2.3
RPL42BYHR141C YKR070WP36151 352 aaKnown RBP0.7□□□□□ -2.3
RPL42BYHR141C SRP14P38985 146 aa0.7□□□□□ -2.3
RPL42BYHR141C SBH2P52871 88 aa0.7□□□□□ -2.3
RPL42BYHR141C YML079WQ03629 201 aa0.7□□□□□ -2.3
RPL42BYHR141C AIM36Q03798 255 aa0.7□□□□□ -2.3
RPL42BYHR141C FIT1Q04433 528 aa0.7□□□□□ -2.3
RPL42BYHR141C SYM1Q06563 197 aa0.7□□□□□ -2.3
RPL42BYHR141C ATG10Q07879 167 aa0.7□□□□□ -2.3
RPL42BYHR141C CCW12Q12127 133 aa0.7□□□□□ -2.3
RPL42BYHR141C YEL028WP39989 153 aa0.69□□□□□ -2.3
RPL42BYHR141C APS3P47064 194 aa0.69□□□□□ -2.3
RPL42BYHR141C YDR102CQ03864 110 aa0.69□□□□□ -2.3
RPL42BYHR141C DUR1,2P32528 1835 aaKnown RBP0.68□□□□□ -2.3
RPL42BYHR141C RPS25BP0C0T4 108 aaKnown RBP0.68□□□□□ -2.3
RPL42BYHR141C FES1P38260 290 aa0.68□□□□□ -2.3
RPL42BYHR141C YPT31P38555 223 aaKnown RBP0.68□□□□□ -2.3
RPL42BYHR141C YER121WP40076 114 aa0.68□□□□□ -2.3
RPL42BYHR141C YGR269WP40326 108 aa0.68□□□□□ -2.3
RPL42BYHR141C MOB1P40484 314 aa0.68□□□□□ -2.3
RPL42BYHR141C YFL051CP43552 160 aa0.68□□□□□ -2.3
RPL42BYHR141C RPL37BP51402 88 aaKnown RBP0.68□□□□□ -2.3
RPL42BYHR141C LIP1Q03579 150 aa0.68□□□□□ -2.3
RPL42BYHR141C YPR114WQ06107 315 aa0.68□□□□□ -2.3
RPL42BYHR141C TRM3Q07527 1436 aa0.68□□□□□ -2.3
RPL42BYHR141C RDI1Q12434 202 aa0.68□□□□□ -2.3
RPL42BYHR141C RPS25AQ3E792 108 aaPredicted RBP0.68□□□□□ -2.3
RPL42BYHR141C KIN28P06242 306 aa0.67□□□□□ -2.3
RPL42BYHR141C SRP102P36057 244 aaPredicted RBP0.67□□□□□ -2.3
RPL42BYHR141C YJR015WP47090 510 aa0.67□□□□□ -2.3
RPL42BYHR141C YGL101WP53144 215 aa0.67□□□□□ -2.3
RPL42BYHR141C HHT1P61830 136 aa0.67□□□□□ -2.3
RPL42BYHR141C TMA20P89886 181 aaPredicted RBP0.67□□□□□ -2.3
RPL42BYHR141C YDC1Q02896 317 aa0.67□□□□□ -2.3
RPL42BYHR141C AVO2Q04749 426 aa0.67□□□□□ -2.3
RPL42BYHR141C KEI1Q06346 221 aa0.67□□□□□ -2.3
RPL42BYHR141C YDL241WQ07738 123 aa0.67□□□□□ -2.3
RPL42BYHR141C YLR053CQ12026 108 aa0.67□□□□□ -2.3
RPL42BYHR141C CMC2Q3E7A4 109 aa0.67□□□□□ -2.3
RPL42BYHR141C SAC3P46674 1301 aa0.66□□□□□ -2.3
RPL42BYHR141C ATP5P09457 212 aa0.66□□□□□ -2.3
RPL42BYHR141C UBI4P0CG63 381 aaKnown RBP0.66□□□□□ -2.3
RPL42BYHR141C SPT14P32363 452 aa0.66□□□□□ -2.3
RPL42BYHR141C ORM1P53224 222 aa0.66□□□□□ -2.3
RPL42BYHR141C YNR064CP53750 290 aa0.66□□□□□ -2.3
RPL42BYHR141C YDL157CQ12082 118 aa0.66□□□□□ -2.3
RPL42BYHR141C PRE1P22141 198 aaKnown RBP0.65□□□□□ -2.31
RPL42BYHR141C ATG8P38182 117 aaRIP-Chip data0.65□□□□□ -2.31not detected
RPL42BYHR141C YAR064WP39563 99 aa0.65□□□□□ -2.31
RPL42BYHR141C DLS1P40366 167 aa0.65□□□□□ -2.31
RPL42BYHR141C YIL102CP40488 101 aa0.65□□□□□ -2.31
RPL42BYHR141C LSM3P57743 89 aaKnown RBP0.65□□□□□ -2.31
RPL42BYHR141C TMA23Q03525 211 aa0.65□□□□□ -2.31
RPL42BYHR141C NSL1Q12143 216 aa0.65□□□□□ -2.31
RPL42BYHR141C RIB3Q99258 208 aa0.65□□□□□ -2.31
RPL42BYHR141C MRS4P23500 304 aa0.64□□□□□ -2.31
RPL42BYHR141C SRP21P32342 167 aa0.64□□□□□ -2.31
RPL42BYHR141C PTC1P35182 281 aa0.64□□□□□ -2.31
RPL42BYHR141C CCC1P47818 322 aa0.64□□□□□ -2.31
RPL42BYHR141C UIP4Q08926 304 aa0.64□□□□□ -2.31
RPL42BYHR141C YLR046CQ12253 270 aa0.64□□□□□ -2.31
RPL42BYHR141C EFG1Q3E705 233 aaKnown RBP0.64□□□□□ -2.31
RPL42BYHR141C CMC4Q3E7A9 73 aa0.64□□□□□ -2.31
RPL42BYHR141C RIF1P29539 1916 aa0.64□□□□□ -2.31
RPL42BYHR141C YOL013W-AP0C272 63 aaPredicted RBP0.63□□□□□ -2.31
RPL42BYHR141C UBC6P33296 250 aaPredicted RBP0.63□□□□□ -2.31
RPL42BYHR141C HTD2P38790 280 aaKnown RBP0.63□□□□□ -2.31
RPL42BYHR141C CIN5P40917 295 aa0.63□□□□□ -2.31
RPL42BYHR141C GEP7P53171 287 aa0.63□□□□□ -2.31
RPL42BYHR141C HRD1Q08109 551 aa0.63□□□□□ -2.31
RPL42BYHR141C FMP49A0A023PZB3 126 aa0.62□□□□□ -2.31
RPL42BYHR141C RPL30P14120 105 aaKnown RBP0.62□□□□□ -2.31
RPL42BYHR141C YBR027CP38220 110 aa0.62□□□□□ -2.31
RPL42BYHR141C YER181CP40097 107 aa0.62□□□□□ -2.31
RPL42BYHR141C APQ12P40532 138 aa0.62□□□□□ -2.31
RPL42BYHR141C FIP1P45976 327 aa0.62□□□□□ -2.31
RPL42BYHR141C NMA1Q06178 401 aaKnown RBP0.62□□□□□ -2.31
RPL42BYHR141C YPD1Q07688 167 aa0.62□□□□□ -2.31
RPL42BYHR141C FCY1Q12178 158 aa0.62□□□□□ -2.31
RPL42BYHR141C TAF2P23255 1407 aa0.62□□□□□ -2.31
RPL42BYHR141C HFA1P32874 2273 aa0.62□□□□□ -2.31
RPL42BYHR141C ADE6P38972 1358 aaKnown RBP0.61□□□□□ -2.31
RPL42BYHR141C QCR2P07257 368 aa0.61□□□□□ -2.31
RPL42BYHR141C YCR001WP25347 104 aa0.61□□□□□ -2.31
RPL42BYHR141C AME1P38313 324 aa0.61□□□□□ -2.31
RPL42BYHR141C SLM6P38343 150 aa0.61□□□□□ -2.31
RPL42BYHR141C HHY1P39982 102 aa0.61□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms