RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNU71	YGR013W	DDI2	P0CH63	225 aa		5	□□□□□ -1.61
SNU71	YGR013W	DDI3	P0CH64	225 aa		5	□□□□□ -1.61
SNU71	YGR013W	GPI14	P47088	403 aa	Known RBP	5	□□□□□ -1.61
SNU71	YGR013W	ARP3	P47117	449 aa	Known RBP	5	□□□□□ -1.61
SNU71	YGR013W	ARO8	P53090	500 aa	Known RBP	5	□□□□□ -1.61
SNU71	YGR013W	AIM36	Q03798	255 aa		5	□□□□□ -1.61
SNU71	YGR013W	YFR032C-B	Q8TGU2	87 aa		5	□□□□□ -1.61
SNU71	YGR013W	YPT53	P36019	220 aa		5	□□□□□ -1.61
SNU71	YGR013W	ECM34	P38728	170 aa		5	□□□□□ -1.61
SNU71	YGR013W	YPL162C	Q12042	273 aa		5	□□□□□ -1.61
SNU71	YGR013W	BUB2	P26448	306 aa	Predicted RBP	4.99	□□□□□ -1.61
SNU71	YGR013W	YKL102C	P34249	101 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	TRM7	P38238	310 aa	Known RBP	4.99	□□□□□ -1.61
SNU71	YGR013W	YGL260W	P53056	76 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	MRPS16	Q02608	121 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	DIG2	Q03373	323 aa	Known RBP	4.99	□□□□□ -1.61
SNU71	YGR013W	SPC3	Q12133	184 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	IRA2	P19158	3079 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	FAB1	P34756	2278 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	FMP27	Q06179	2628 aa		4.99	□□□□□ -1.61
SNU71	YGR013W	YEL009C-A	A0A023PZF2	135 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	YPR170W-B	P0C5R9	85 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	YBR063C	P38083	404 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	PGD1	P40356	397 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	MZM1	Q03429	123 aa	Predicted RBP	4.98	□□□□□ -1.61
SNU71	YGR013W	DGA1	Q08650	418 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	YIR021W-A	Q3E739	70 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	YLR422W	Q06409	1932 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	YGP1	P38616	354 aa	Known RBP	4.98	□□□□□ -1.61
SNU71	YGR013W	ATG39	Q06159	398 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	ISD11	Q6Q560	94 aa		4.98	□□□□□ -1.61
SNU71	YGR013W	REP2	P03872	296 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	SPS2	P08459	502 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	TOM40	P23644	387 aa	Known RBP	4.97	□□□□□ -1.61
SNU71	YGR013W	SEC17	P32602	292 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	UGX2	P32772	223 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	AVT2	P39981	480 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	MNN5	P46982	586 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	SNN1	P48232	102 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	RPS12	P48589	143 aa	Known RBP	4.97	□□□□□ -1.61
SNU71	YGR013W	GAL83	Q04739	417 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	YPR202W	Q08993	238 aa		4.97	□□□□□ -1.61
SNU71	YGR013W	RPS1B	P23248	255 aa	Known RBP	4.96	□□□□□ -1.61
SNU71	YGR013W	SSS1	P35179	80 aa		4.96	□□□□□ -1.61
SNU71	YGR013W	YBR013C	P38215	129 aa		4.96	□□□□□ -1.61
SNU71	YGR013W	IPI1	P38803	334 aa	Predicted RBP	4.96	□□□□□ -1.61
SNU71	YGR013W	GLC8	P41818	229 aa		4.96	□□□□□ -1.61
SNU71	YGR013W	FCF2	Q12035	217 aa	Predicted RBP	4.96	□□□□□ -1.61
SNU71	YGR013W	YLR046C	Q12253	270 aa		4.96	□□□□□ -1.61
SNU71	YGR013W	SLO1	Q3E784	85 aa		4.96	□□□□□ -1.61
SNU71	YGR013W	LDB16	P25587	256 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	PRS3	P38689	320 aa	Known RBP	4.96	□□□□□ -1.62
SNU71	YGR013W	YPI1	P43587	155 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	AIF1	P52923	378 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	PGA1	P53896	198 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	SDH7	Q04401	133 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	GEP5	Q12393	293 aa		4.96	□□□□□ -1.62
SNU71	YGR013W	MPD1	Q12404	318 aa	Known RBP	4.96	□□□□□ -1.62
SNU71	YGR013W	RPL9A	P05738	191 aa	Known RBP	4.95	□□□□□ -1.62
SNU71	YGR013W	SUA7	P29055	345 aa	Predicted RBP	4.95	□□□□□ -1.62
SNU71	YGR013W	SNM1	P40993	198 aa		4.95	□□□□□ -1.62
SNU71	YGR013W	NSE4	P43124	402 aa		4.95	□□□□□ -1.62
SNU71	YGR013W	RPL9B	P51401	191 aa	Known RBP	4.95	□□□□□ -1.62
SNU71	YGR013W	SLM2	P53955	656 aa		4.95	□□□□□ -1.62
SNU71	YGR013W	FSF1	Q12029	327 aa	Known RBP	4.95	□□□□□ -1.62
SNU71	YGR013W	PRR2	Q12310	699 aa		4.95	□□□□□ -1.62
SNU71	YGR013W	FUN14	P18411	198 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	PKR1	Q03880	122 aa	Known RBP	4.94	□□□□□ -1.62
SNU71	YGR013W	PRP11	Q07350	266 aa	Predicted RBP	4.94	□□□□□ -1.62
SNU71	YGR013W	TAD3	Q9URQ3	322 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	SGA1	P08019	549 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	YBR285W	P38354	144 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	SHH3	Q04487	196 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	YGL194C-A	Q2V2P6	80 aa		4.94	□□□□□ -1.62
SNU71	YGR013W	PDX3	P38075	228 aa	Known RBP	4.93	□□□□□ -1.62
SNU71	YGR013W	RPL22B	P56628	122 aa	Known RBP	4.93	□□□□□ -1.62
SNU71	YGR013W	YDR366C	P87287	132 aa		4.93	□□□□□ -1.62
SNU71	YGR013W	RSM10	Q03201	203 aa		4.93	□□□□□ -1.62
SNU71	YGR013W	YAR068W	P39564	161 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	SMD1	Q02260	146 aa	Predicted RBP	4.92	□□□□□ -1.62
SNU71	YGR013W	TRM12	Q04235	462 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	YLR156W	P0CE96	114 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	YLR159W	P0CE97	114 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	YLR161W	P0CE98	114 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	UBI4	P0CG63	381 aa	Known RBP	4.92	□□□□□ -1.62
SNU71	YGR013W	CKS1	P20486	150 aa	Known RBP	4.92	□□□□□ -1.62
SNU71	YGR013W	YBR032W	P38223	100 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	NSG1	P38837	291 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	MOB1	P40484	314 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	YGL101W	P53144	215 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	MRX8	Q05473	314 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	ATG10	Q07879	167 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	MCP1	Q12106	302 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	YLR099W-A	Q3E798	87 aa		4.92	□□□□□ -1.62
SNU71	YGR013W	ADH1	P00330	348 aa	Known RBP	4.91	□□□□□ -1.62
SNU71	YGR013W	COX5B	P00425	151 aa		4.91	□□□□□ -1.62
SNU71	YGR013W	RPB3	P16370	318 aa	Known RBP	4.91	□□□□□ -1.62
SNU71	YGR013W	SRB6	P32570	121 aa		4.91	□□□□□ -1.62
SNU71	YGR013W	TKL2	P33315	681 aa		4.91	□□□□□ -1.62
SNU71	YGR013W	MRPL24	P36525	258 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms