RNA–Protein interactions for RNA: YER148W

SPT15, Transcript of TATA-binding protein, yeastyeast

Gene SPT15, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT15YER148W URA6P15700 204 aa2.09□□□□□ -2.07
SPT15YER148W PHO85P17157 305 aa2.09□□□□□ -2.07
SPT15YER148W BUB2P26448 306 aaPredicted RBP2.09□□□□□ -2.07
SPT15YER148W SEC17P32602 292 aa2.09□□□□□ -2.07
SPT15YER148W ECM31P38122 312 aa2.09□□□□□ -2.07
SPT15YER148W SVP26P38869 228 aa2.09□□□□□ -2.07
SPT15YER148W IRC22P40006 225 aa2.09□□□□□ -2.07
SPT15YER148W BMT5P40493 336 aa2.09□□□□□ -2.07
SPT15YER148W OTU1P43558 301 aa2.09□□□□□ -2.07
SPT15YER148W YMD8Q03697 442 aa2.09□□□□□ -2.07
SPT15YER148W PRM3Q08931 133 aa2.09□□□□□ -2.07
SPT15YER148W SRY1P36007 326 aa2.08□□□□□ -2.08
SPT15YER148W CAF4P36130 643 aa2.08□□□□□ -2.08
SPT15YER148W YHR022CP38763 256 aa2.08□□□□□ -2.08
SPT15YER148W DOG2P38773 246 aa2.08□□□□□ -2.08
SPT15YER148W DSE2P38844 325 aa2.08□□□□□ -2.08
SPT15YER148W BRR6P53062 197 aa2.08□□□□□ -2.08
SPT15YER148W GET1P53192 235 aa2.08□□□□□ -2.08
SPT15YER148W FYV6P53913 173 aa2.08□□□□□ -2.08
SPT15YER148W CYT2Q00873 224 aa2.08□□□□□ -2.08
SPT15YER148W ATG38Q05789 226 aaKnown RBP2.08□□□□□ -2.08
SPT15YER148W HOR7Q05827 59 aa2.08□□□□□ -2.08
SPT15YER148W YMR105W-AQ8TGS8 64 aa2.08□□□□□ -2.08
SPT15YER148W THP2O13539 261 aaKnown RBP2.07□□□□□ -2.08
SPT15YER148W CDC7P06243 507 aa2.07□□□□□ -2.08
SPT15YER148W YPK2P18961 677 aa2.07□□□□□ -2.08
SPT15YER148W TIM12P32830 109 aa2.07□□□□□ -2.08
SPT15YER148W GCN20P43535 752 aaKnown RBP2.07□□□□□ -2.08
SPT15YER148W VPS55P47111 140 aa2.07□□□□□ -2.08
SPT15YER148W XPT1P47165 209 aa2.07□□□□□ -2.08
SPT15YER148W PRM8P53174 237 aa2.07□□□□□ -2.08
SPT15YER148W NOP19P53317 196 aaPredicted RBP2.07□□□□□ -2.08
SPT15YER148W RCF2P53721 224 aa2.07□□□□□ -2.08
SPT15YER148W YNR062CP53748 327 aa2.07□□□□□ -2.08
SPT15YER148W YPR127WQ06494 345 aa2.07□□□□□ -2.08
SPT15YER148W DCN1Q12395 269 aa2.07□□□□□ -2.08
SPT15YER148W REP2P03872 296 aa2.06□□□□□ -2.08
SPT15YER148W YMR31P19955 123 aa2.06□□□□□ -2.08
SPT15YER148W PPA2P28239 310 aa2.06□□□□□ -2.08
SPT15YER148W FMP23P38231 175 aa2.06□□□□□ -2.08
SPT15YER148W RMD6P39975 231 aa2.06□□□□□ -2.08
SPT15YER148W FAR7P43592 221 aa2.06□□□□□ -2.08
SPT15YER148W YDR274CP87283 123 aa2.06□□□□□ -2.08
SPT15YER148W GPI17Q04080 534 aa2.06□□□□□ -2.08
SPT15YER148W LPP1Q04396 274 aa2.06□□□□□ -2.08
SPT15YER148W YPR170W-BP0C5R9 85 aa2.05□□□□□ -2.08
SPT15YER148W RPS1BP23248 255 aaKnown RBP2.05□□□□□ -2.08
SPT15YER148W RPC19P28000 142 aaKnown RBP2.05□□□□□ -2.08
SPT15YER148W SRL3P36167 246 aa2.05□□□□□ -2.08
SPT15YER148W MIC12P38341 106 aa2.05□□□□□ -2.08
SPT15YER148W RTC3P38804 111 aaPredicted RBP2.05□□□□□ -2.08
SPT15YER148W MPC2P38857 129 aa2.05□□□□□ -2.08
SPT15YER148W VTC1P40046 129 aaRIP-Chip data2.05□□□□□ -2.08not detected
SPT15YER148W YER135CP40082 130 aa2.05□□□□□ -2.08
SPT15YER148W YGL235WP53071 178 aa2.05□□□□□ -2.08
SPT15YER148W YBR121C-AP0C5L4 52 aa2.04□□□□□ -2.08
SPT15YER148W MER1P16523 270 aa2.04□□□□□ -2.08
SPT15YER148W TMA19P35691 167 aaKnown RBP2.04□□□□□ -2.08
SPT15YER148W PGD1P40356 397 aa2.04□□□□□ -2.08
SPT15YER148W RPL33BP41056 107 aaKnown RBP2.04□□□□□ -2.08
SPT15YER148W NUP57P48837 541 aa2.04□□□□□ -2.08
SPT15YER148W YPL067CQ02754 198 aa2.04□□□□□ -2.08
SPT15YER148W DIG2Q03373 323 aaKnown RBP2.04□□□□□ -2.08
SPT15YER148W YDR248CQ03786 193 aa2.04□□□□□ -2.08
SPT15YER148W YHP1Q04116 353 aa2.04□□□□□ -2.08
SPT15YER148W YOL131WQ08270 108 aa2.04□□□□□ -2.08
SPT15YER148W YKL183C-AQ3E765 70 aa2.04□□□□□ -2.08
SPT15YER148W CDC28P00546 298 aaKnown RBP2.03□□□□□ -2.08
SPT15YER148W KIN28P06242 306 aa2.03□□□□□ -2.08
SPT15YER148W NHP6BP11633 99 aaKnown RBP2.03□□□□□ -2.08
SPT15YER148W ATG22P25568 528 aa2.03□□□□□ -2.08
SPT15YER148W MSS2P40990 351 aa2.03□□□□□ -2.08
SPT15YER148W BXI1P48558 297 aa2.03□□□□□ -2.08
SPT15YER148W ALG13P53178 202 aa2.03□□□□□ -2.08
SPT15YER148W BNA7Q04066 261 aa2.03□□□□□ -2.08
SPT15YER148W RIO1Q12196 484 aaKnown RBP2.03□□□□□ -2.08
SPT15YER148W JLP1Q12358 412 aa2.03□□□□□ -2.08
SPT15YER148W COX5BP00425 151 aa2.02□□□□□ -2.09
SPT15YER148W SIR2P06700 562 aa2.02□□□□□ -2.09
SPT15YER148W APS1P35181 156 aa2.02□□□□□ -2.09
SPT15YER148W CBT1P36038 271 aaPredicted RBP2.02□□□□□ -2.09
SPT15YER148W TIR3P40552 269 aa2.02□□□□□ -2.09
SPT15YER148W MPC1P53157 130 aaKnown RBP2.02□□□□□ -2.09
SPT15YER148W BUD25P85052 153 aa2.02□□□□□ -2.09
SPT15YER148W RPL28P02406 149 aaKnown RBP2.01□□□□□ -2.09
SPT15YER148W ERG28P40030 148 aa2.01□□□□□ -2.09
SPT15YER148W MGA1P53050 456 aa2.01□□□□□ -2.09
SPT15YER148W DOC1P53068 250 aa2.01□□□□□ -2.09
SPT15YER148W SNZ1Q03148 297 aa2.01□□□□□ -2.09
SPT15YER148W FCY1Q12178 158 aa2.01□□□□□ -2.09
SPT15YER148W MHF2Q3E829 80 aa2.01□□□□□ -2.09
SPT15YER148W RPL27BP0C2H7 136 aaKnown RBP2□□□□□ -2.09
SPT15YER148W YLR156WP0CE96 114 aa2□□□□□ -2.09
SPT15YER148W YLR159WP0CE97 114 aa2□□□□□ -2.09
SPT15YER148W YLR161WP0CE98 114 aa2□□□□□ -2.09
SPT15YER148W HYM1P32464 399 aa2□□□□□ -2.09
SPT15YER148W LHP1P33399 275 aaKnown RBP2□□□□□ -2.09
SPT15YER148W MRPL28P36527 147 aa2□□□□□ -2.09
SPT15YER148W YGR201CP42936 225 aa2□□□□□ -2.09
SPT15YER148W HHT1P61830 136 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms