RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W EDC3P39998 551 aaKnown RBP1.48□□□□□ -2.17
RPN9YDR427W SPC25P40014 221 aa1.48□□□□□ -2.17
RPN9YDR427W HYR1P40581 163 aaKnown RBP1.48□□□□□ -2.17
RPN9YDR427W YNL033WP53964 284 aa1.48□□□□□ -2.17
RPN9YDR427W SNO1Q03144 224 aa1.48□□□□□ -2.17
RPN9YDR427W AIM34Q03673 198 aa1.48□□□□□ -2.17
RPN9YDR427W YMR253CQ04835 414 aa1.48□□□□□ -2.17
RPN9YDR427W YPR013CQ12145 317 aa1.48□□□□□ -2.17
RPN9YDR427W URB1P34241 1764 aaKnown RBP1.48□□□□□ -2.17
RPN9YDR427W ACC1Q00955 2233 aaKnown RBP1.48□□□□□ -2.17
RPN9YDR427W COX8P04039 78 aa1.47□□□□□ -2.17
RPN9YDR427W AQY2P0CD90 149 aa1.47□□□□□ -2.17
RPN9YDR427W IDP1P21954 428 aaKnown RBP1.47□□□□□ -2.17
RPN9YDR427W AHC2P25649 128 aa1.47□□□□□ -2.17
RPN9YDR427W YKR041WP36134 250 aa1.47□□□□□ -2.17
RPN9YDR427W CUP9P41817 306 aa1.47□□□□□ -2.17
RPN9YDR427W YFL065CP43539 102 aa1.47□□□□□ -2.17
RPN9YDR427W FMP32P43557 207 aa1.47□□□□□ -2.17
RPN9YDR427W THG1P53215 237 aaKnown RBP1.47□□□□□ -2.17
RPN9YDR427W FIT2Q08906 153 aa1.47□□□□□ -2.17
RPN9YDR427W YOR342CQ12182 319 aa1.47□□□□□ -2.17
RPN9YDR427W MPD1Q12404 318 aaKnown RBP1.47□□□□□ -2.17
RPN9YDR427W YPR014CQ6B0W2 109 aa1.47□□□□□ -2.17
RPN9YDR427W HAP1P0CE41 1502 aa1.46□□□□□ -2.18
RPN9YDR427W NSP1P14907 823 aaKnown RBP1.46□□□□□ -2.18
RPN9YDR427W NSG1P38837 291 aa1.46□□□□□ -2.18
RPN9YDR427W HPA3P39979 161 aa1.46□□□□□ -2.18
RPN9YDR427W YFH7P43591 353 aa1.46□□□□□ -2.18
RPN9YDR427W GPI14P47088 403 aaKnown RBP1.46□□□□□ -2.18
RPN9YDR427W YMR252CQ04814 134 aa1.46□□□□□ -2.18
RPN9YDR427W YET3Q07451 203 aa1.46□□□□□ -2.18
RPN9YDR427W YLR412C-AQ3E742 68 aa1.46□□□□□ -2.18
RPN9YDR427W SNF2P22082 1703 aa1.46□□□□□ -2.18
RPN9YDR427W MLP1Q02455 1875 aaKnown RBP1.46□□□□□ -2.18
RPN9YDR427W BCK1Q01389 1478 aa1.45□□□□□ -2.18
RPN9YDR427W TY3B-IQ7LHG5 1498 aaKnown RBP1.45□□□□□ -2.18
RPN9YDR427W RIM15P43565 1770 aa1.45□□□□□ -2.18
RPN9YDR427W RPS24AP0CX31 135 aaKnown RBP1.45□□□□□ -2.18
RPN9YDR427W RPS24BP0CX32 135 aaKnown RBP1.45□□□□□ -2.18
RPN9YDR427W GCY1P14065 312 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
RPN9YDR427W DIG2Q03373 323 aaKnown RBP1.45□□□□□ -2.18
RPN9YDR427W BRX1Q08235 291 aaKnown RBP1.45□□□□□ -2.18
RPN9YDR427W APC1P53886 1748 aa1.44□□□□□ -2.18
RPN9YDR427W RPB7P34087 171 aa1.44□□□□□ -2.18
RPN9YDR427W CLG1P35190 452 aa1.44□□□□□ -2.18
RPN9YDR427W SFK1P35735 353 aa1.44□□□□□ -2.18
RPN9YDR427W YEL067CP39978 195 aa1.44□□□□□ -2.18
RPN9YDR427W POG1P40473 351 aa1.44□□□□□ -2.18
RPN9YDR427W ATG38Q05789 226 aaKnown RBP1.44□□□□□ -2.18
RPN9YDR427W SHH4Q06236 168 aa1.44□□□□□ -2.18
RPN9YDR427W FYV12Q08559 129 aa1.44□□□□□ -2.18
RPN9YDR427W GRE1Q08969 168 aa1.44□□□□□ -2.18
RPN9YDR427W ATP20Q12233 115 aa1.44□□□□□ -2.18
RPN9YDR427W DGK1Q12382 290 aa1.44□□□□□ -2.18
RPN9YDR427W YRF1-3P0CX14 1859 aa1.43□□□□□ -2.18
RPN9YDR427W YRF1-7P0CX15 1859 aa1.43□□□□□ -2.18
RPN9YDR427W YRF1-6P53819 1859 aa1.43□□□□□ -2.18
RPN9YDR427W ARO7P32178 256 aa1.43□□□□□ -2.18
RPN9YDR427W YKL102CP34249 101 aa1.43□□□□□ -2.18
RPN9YDR427W NSA2P40078 261 aaKnown RBP1.43□□□□□ -2.18
RPN9YDR427W GPI17Q04080 534 aa1.43□□□□□ -2.18
RPN9YDR427W UTP10P42945 1769 aaKnown RBP1.43□□□□□ -2.18
RPN9YDR427W KRE5P22023 1365 aa1.43□□□□□ -2.18
RPN9YDR427W YLR419WQ06698 1435 aaKnown RBP1.42□□□□□ -2.18
RPN9YDR427W GSP2P32836 220 aaKnown RBP1.42□□□□□ -2.18
RPN9YDR427W NVJ1P38881 321 aa1.42□□□□□ -2.18
RPN9YDR427W SEC72P39742 193 aaKnown RBP1.42□□□□□ -2.18
RPN9YDR427W YEL008WP40001 126 aa1.42□□□□□ -2.18
RPN9YDR427W ALB1P47019 175 aaPredicted RBP1.42□□□□□ -2.18
RPN9YDR427W JAC1P53193 184 aa1.42□□□□□ -2.18
RPN9YDR427W DAS2Q12084 232 aa1.42□□□□□ -2.18
RPN9YDR427W EGD2P38879 174 aaKnown RBP1.41□□□□□ -2.18
RPN9YDR427W SOK1P40317 901 aa1.41□□□□□ -2.18
RPN9YDR427W HPT1Q04178 221 aaKnown RBP1.41□□□□□ -2.18
RPN9YDR427W PST2Q12335 198 aaKnown RBP1.41□□□□□ -2.18
RPN9YDR427W YCR023CP25351 611 aa1.4□□□□□ -2.19
RPN9YDR427W TRR1P29509 319 aaKnown RBP1.4□□□□□ -2.19
RPN9YDR427W MAK5P38112 773 aaPredicted RBP1.4□□□□□ -2.19
RPN9YDR427W RFC2P40348 353 aa1.4□□□□□ -2.19
RPN9YDR427W SBH1P52870 82 aa1.4□□□□□ -2.19
RPN9YDR427W YIP3P53633 176 aa1.4□□□□□ -2.19
RPN9YDR427W GAL83Q04739 417 aa1.4□□□□□ -2.19
RPN9YDR427W YLR422WQ06409 1932 aa1.39□□□□□ -2.19
RPN9YDR427W YHR212W-AP0CX91 67 aa1.39□□□□□ -2.19
RPN9YDR427W SEC14P24280 304 aaKnown RBP1.39□□□□□ -2.19
RPN9YDR427W YCL042WP25572 119 aa1.39□□□□□ -2.19
RPN9YDR427W STP22P25604 385 aa1.39□□□□□ -2.19
RPN9YDR427W RRT1P38192 103 aa1.39□□□□□ -2.19
RPN9YDR427W YNL200CP40165 246 aaKnown RBP1.39□□□□□ -2.19
RPN9YDR427W UPS3Q04006 179 aa1.39□□□□□ -2.19
RPN9YDR427W RRP17Q04031 235 aaPredicted RBP1.39□□□□□ -2.19
RPN9YDR427W YOR015WQ12169 119 aa1.39□□□□□ -2.19
RPN9YDR427W CPR5P35176 225 aa1.38□□□□□ -2.19
RPN9YDR427W YAP3P38749 330 aa1.38□□□□□ -2.19
RPN9YDR427W SOL1P50278 321 aa1.38□□□□□ -2.19
RPN9YDR427W YLR460CP54007 376 aa1.38□□□□□ -2.19
RPN9YDR427W COA3Q3E7B2 85 aa1.38□□□□□ -2.19
RPN9YDR427W PMD1P32634 1753 aa1.38□□□□□ -2.19
RPN9YDR427W FYV4P38783 130 aaPredicted RBP1.37□□□□□ -2.19
RPN9YDR427W MPM1P40364 252 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms