RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C HPM1P40481 377 aa4□□□□□ -1.77
MSS116YDR194C APS2Q00381 147 aa4□□□□□ -1.77
MSS116YDR194C RDS3Q06835 107 aaPredicted RBP4□□□□□ -1.77
MSS116YDR194C YOR381W-AQ3E804 55 aa4□□□□□ -1.77
MSS116YDR194C RPS1BP23248 255 aaKnown RBP3.99□□□□□ -1.77
MSS116YDR194C SUI1P32911 108 aaKnown RBP3.99□□□□□ -1.77
MSS116YDR194C ERV15P38312 142 aa3.99□□□□□ -1.77
MSS116YDR194C YEL073CP39974 107 aa3.99□□□□□ -1.77
MSS116YDR194C YER135CP40082 130 aa3.99□□□□□ -1.77
MSS116YDR194C RIO2P40160 425 aaKnown RBP3.99□□□□□ -1.77
MSS116YDR194C YOR304C-AO14468 76 aa3.98□□□□□ -1.77
MSS116YDR194C HSP12P22943 109 aaKnown RBP3.98□□□□□ -1.77
MSS116YDR194C AHT1P29589 182 aa3.98□□□□□ -1.77
MSS116YDR194C AYR1P40471 297 aa3.98□□□□□ -1.77
MSS116YDR194C ALB1P47019 175 aaPredicted RBP3.98□□□□□ -1.77
MSS116YDR194C YNL019CP53975 284 aa3.98□□□□□ -1.77
MSS116YDR194C ANT1Q06497 328 aa3.98□□□□□ -1.77
MSS116YDR194C SNT2P53127 1403 aa3.98□□□□□ -1.77
MSS116YDR194C YLR236CA0A023PZG4 107 aa3.98□□□□□ -1.77
MSS116YDR194C DDR48P18899 430 aaKnown RBP3.98□□□□□ -1.77
MSS116YDR194C MIG1P27705 504 aa3.98□□□□□ -1.77
MSS116YDR194C YNL217WP40152 326 aa3.98□□□□□ -1.77
MSS116YDR194C BUD25P85052 153 aa3.98□□□□□ -1.77
MSS116YDR194C YPR195CQ06594 109 aa3.98□□□□□ -1.77
MSS116YDR194C YNL277W-AQ3E7Z0 62 aa3.98□□□□□ -1.77
MSS116YDR194C RPL14AP36105 138 aaKnown RBP3.97□□□□□ -1.77
MSS116YDR194C RPL14BP38754 138 aaKnown RBP3.97□□□□□ -1.77
MSS116YDR194C RGI1P40043 161 aaPredicted RBP3.97□□□□□ -1.77
MSS116YDR194C YNR064CP53750 290 aa3.97□□□□□ -1.77
MSS116YDR194C LIP1Q03579 150 aa3.97□□□□□ -1.77
MSS116YDR194C MRS4P23500 304 aa3.96□□□□□ -1.77
MSS116YDR194C RIM9Q04734 239 aa3.96□□□□□ -1.77
MSS116YDR194C YOR289WQ12012 251 aaPredicted RBP3.96□□□□□ -1.77
MSS116YDR194C VPS68Q12016 184 aa3.96□□□□□ -1.77
MSS116YDR194C RAS2P01120 322 aaKnown RBP3.96□□□□□ -1.78
MSS116YDR194C RNH202Q05635 350 aa3.96□□□□□ -1.78
MSS116YDR194C YPR114WQ06107 315 aa3.96□□□□□ -1.78
MSS116YDR194C YLR099W-AQ3E798 87 aa3.96□□□□□ -1.78
MSS116YDR194C YOL162WP0CF19 215 aa3.95□□□□□ -1.78
MSS116YDR194C YGR017WP53210 297 aa3.95□□□□□ -1.78
MSS116YDR194C YLR422WQ06409 1932 aa3.95□□□□□ -1.78
MSS116YDR194C PEX4P29340 183 aa3.94□□□□□ -1.78
MSS116YDR194C GSP1P32835 219 aaKnown RBP3.94□□□□□ -1.78
MSS116YDR194C GSP2P32836 220 aaKnown RBP3.94□□□□□ -1.78
MSS116YDR194C PHO88P38264 188 aaPredicted RBP3.94□□□□□ -1.78
MSS116YDR194C SFT1P43682 97 aa3.94□□□□□ -1.78
MSS116YDR194C BOL1Q3E793 110 aa3.94□□□□□ -1.78
MSS116YDR194C TOP2P06786 1428 aaKnown RBP3.94□□□□□ -1.78
MSS116YDR194C FMT1P32785 401 aa3.94□□□□□ -1.78
MSS116YDR194C SDH4P37298 181 aa3.94□□□□□ -1.78
MSS116YDR194C YBR209WP38311 105 aa3.93□□□□□ -1.78
MSS116YDR194C YPT31P38555 223 aaKnown RBP3.93□□□□□ -1.78
MSS116YDR194C RUB1Q03919 77 aa3.93□□□□□ -1.78
MSS116YDR194C ATG10Q07879 167 aa3.93□□□□□ -1.78
MSS116YDR194C YKR070WP36151 352 aaKnown RBP3.93□□□□□ -1.78
MSS116YDR194C PAC10P48363 199 aa3.93□□□□□ -1.78
MSS116YDR194C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
MSS116YDR194C YOR015WQ12169 119 aa3.93□□□□□ -1.78
MSS116YDR194C GEP7P53171 287 aa3.92□□□□□ -1.78
MSS116YDR194C AIM11P87275 137 aa3.92□□□□□ -1.78
MSS116YDR194C CUE4Q04201 117 aaPredicted RBP3.92□□□□□ -1.78
MSS116YDR194C LDB18Q07887 179 aa3.92□□□□□ -1.78
MSS116YDR194C YPR013CQ12145 317 aa3.92□□□□□ -1.78
MSS116YDR194C GPA2P10823 449 aa3.91□□□□□ -1.78
MSS116YDR194C DML1Q03652 475 aa3.91□□□□□ -1.78
MSS116YDR194C YPL225WQ08971 146 aaKnown RBP3.91□□□□□ -1.78
MSS116YDR194C RAD28Q12021 506 aa3.91□□□□□ -1.78
MSS116YDR194C NMT1P14743 455 aa3.91□□□□□ -1.78
MSS116YDR194C SVP26P38869 228 aa3.91□□□□□ -1.78
MSS116YDR194C RRT7Q07829 113 aa3.91□□□□□ -1.78
MSS116YDR194C FYV7Q12247 151 aa3.91□□□□□ -1.78
MSS116YDR194C PIR1Q03178 341 aa3.9□□□□□ -1.79
MSS116YDR194C YLR118CQ12354 227 aa3.9□□□□□ -1.79
MSS116YDR194C YOR062CP36025 268 aa3.89□□□□□ -1.79
MSS116YDR194C GAA1P39012 614 aa3.89□□□□□ -1.79
MSS116YDR194C TVP18Q04767 167 aa3.89□□□□□ -1.79
MSS116YDR194C CSI2Q08054 341 aa3.89□□□□□ -1.79
MSS116YDR194C NOP1P15646 327 aaKnown RBP3.89□□□□□ -1.79
MSS116YDR194C SPO73P40031 143 aa3.89□□□□□ -1.79
MSS116YDR194C EMC4P53073 190 aa3.89□□□□□ -1.79
MSS116YDR194C GRX5Q02784 150 aa3.89□□□□□ -1.79
MSS116YDR194C EMC6Q12431 108 aa3.89□□□□□ -1.79
MSS116YDR194C FAS1P07149 2051 aaKnown RBP3.88□□□□□ -1.79
MSS116YDR194C UBR1P19812 1950 aa3.88□□□□□ -1.79
MSS116YDR194C SEC11P15367 167 aa3.88□□□□□ -1.79
MSS116YDR194C MDH2P22133 377 aa3.88□□□□□ -1.79
MSS116YDR194C CLB6P32943 380 aa3.88□□□□□ -1.79
MSS116YDR194C POP3P53833 195 aaPredicted RBP3.88□□□□□ -1.79
MSS116YDR194C ELC1Q03071 99 aa3.88□□□□□ -1.79
MSS116YDR194C ATG41Q12048 136 aa3.88□□□□□ -1.79
MSS116YDR194C KNH1P50112 268 aa3.87□□□□□ -1.79
MSS116YDR194C AIM36Q03798 255 aa3.87□□□□□ -1.79
MSS116YDR194C UPS3Q04006 179 aa3.87□□□□□ -1.79
MSS116YDR194C UPS1Q05776 175 aa3.87□□□□□ -1.79
MSS116YDR194C SPA2P23201 1466 aaKnown RBP3.87□□□□□ -1.79
MSS116YDR194C ADK1P07170 222 aaKnown RBP3.87□□□□□ -1.79
MSS116YDR194C DDI2P0CH63 225 aa3.87□□□□□ -1.79
MSS116YDR194C DDI3P0CH64 225 aa3.87□□□□□ -1.79
MSS116YDR194C NSE4P43124 402 aa3.87□□□□□ -1.79
MSS116YDR194C SAY1P53324 424 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms