RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED1	YDR077W	TY1A-PL	P0CX73	440 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-JR1	P0CX74	440 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-LR3	P0CX75	440 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-ML2	P0CX76	440 aa		7.7	□□□□□ -1.18
SED1	YDR077W	RPB3	P16370	318 aa	Known RBP	7.7	□□□□□ -1.18
SED1	YDR077W	HMX1	P32339	317 aa		7.7	□□□□□ -1.18
SED1	YDR077W	AFR1	P33304	620 aa		7.7	□□□□□ -1.18
SED1	YDR077W	MIA40	P36046	403 aa		7.7	□□□□□ -1.18
SED1	YDR077W	YKR045C	P36138	183 aa		7.7	□□□□□ -1.18
SED1	YDR077W	IMD2	P38697	523 aa	Known RBP	7.7	□□□□□ -1.18
SED1	YDR077W	YGR018C	P53211	109 aa		7.7	□□□□□ -1.18
SED1	YDR077W	LST7	P53237	242 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TMA10	Q06177	86 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-GR1	Q12085	440 aa		7.7	□□□□□ -1.18
SED1	YDR077W	ERV2	Q12284	196 aa		7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.7	□□□□□ -1.18
SED1	YDR077W	TY1A-OL	Q92392	440 aa	Known RBP	7.7	□□□□□ -1.18
SED1	YDR077W	SUA7	P29055	345 aa	Predicted RBP	7.69	□□□□□ -1.18
SED1	YDR077W	NTF2	P33331	125 aa	Known RBP	7.69	□□□□□ -1.18
SED1	YDR077W	AVT5	P38176	459 aa		7.69	□□□□□ -1.18
SED1	YDR077W	RRT1	P38192	103 aa		7.69	□□□□□ -1.18
SED1	YDR077W	CDS1	P38221	457 aa		7.69	□□□□□ -1.18
SED1	YDR077W	CSH1	P38287	376 aa		7.69	□□□□□ -1.18
SED1	YDR077W	DOG2	P38773	246 aa		7.69	□□□□□ -1.18
SED1	YDR077W	DOG1	P38774	246 aa		7.69	□□□□□ -1.18
SED1	YDR077W	GTT1	P40582	234 aa		7.69	□□□□□ -1.18
SED1	YDR077W	PAU15	P40585	124 aa		7.69	□□□□□ -1.18
SED1	YDR077W	YJL213W	P40896	331 aa		7.69	□□□□□ -1.18
SED1	YDR077W	NSE4	P43124	402 aa		7.69	□□□□□ -1.18
SED1	YDR077W	ATG27	P46989	271 aa		7.69	□□□□□ -1.18
SED1	YDR077W	DSK2	P48510	373 aa		7.69	□□□□□ -1.18
SED1	YDR077W	SDH7	Q04401	133 aa		7.69	□□□□□ -1.18
SED1	YDR077W	YLR118C	Q12354	227 aa		7.69	□□□□□ -1.18
SED1	YDR077W	CDC7	P06243	507 aa		7.68	□□□□□ -1.18
SED1	YDR077W	HSP12	P22943	109 aa	Known RBP	7.68	□□□□□ -1.18
SED1	YDR077W	YCR022C	P25620	114 aa		7.68	□□□□□ -1.18
SED1	YDR077W	DAN1	P47178	298 aa		7.68	□□□□□ -1.18
SED1	YDR077W	MGA1	P53050	456 aa		7.68	□□□□□ -1.18
SED1	YDR077W	YNR071C	P53757	342 aa		7.68	□□□□□ -1.18
SED1	YDR077W	YMR317W	Q04893	1140 aa		7.68	□□□□□ -1.18
SED1	YDR077W	SNU23	Q12368	194 aa	Predicted RBP	7.68	□□□□□ -1.18
SED1	YDR077W	PET494	P07390	489 aa	Predicted RBP	7.67	□□□□□ -1.18
SED1	YDR077W	SDH4	P37298	181 aa		7.67	□□□□□ -1.18
SED1	YDR077W	HSP10	P38910	106 aa		7.67	□□□□□ -1.18
SED1	YDR077W	CYB5	P40312	120 aa		7.67	□□□□□ -1.18
SED1	YDR077W	RNA15	P25299	296 aa	Predicted RBP	7.66	□□□□□ -1.18
SED1	YDR077W	FEN2	P25621	512 aa	Known RBP	7.66	□□□□□ -1.18
SED1	YDR077W	MRPL38	P35996	138 aa	Predicted RBP	7.66	□□□□□ -1.18
SED1	YDR077W	YKL075C	P36083	450 aa		7.66	□□□□□ -1.18
SED1	YDR077W	GPP2	P40106	250 aa	Known RBP	7.66	□□□□□ -1.18
SED1	YDR077W	YOR352W	Q08816	343 aa		7.66	□□□□□ -1.18
SED1	YDR077W	URA2	P07259	2214 aa	Known RBP	7.66	□□□□□ -1.18
SED1	YDR077W	COQ3	P27680	312 aa		7.65	□□□□□ -1.18
SED1	YDR077W	SFT2	P38166	215 aa		7.65	□□□□□ -1.18
SED1	YDR077W	ICS2	P38284	255 aa		7.65	□□□□□ -1.18
SED1	YDR077W	YGR026W	P53217	278 aa		7.65	□□□□□ -1.18
SED1	YDR077W	HST4	P53688	370 aa		7.65	□□□□□ -1.18
SED1	YDR077W	DAD3	P69850	94 aa		7.65	□□□□□ -1.18
SED1	YDR077W	YMR166C	Q03829	368 aa		7.65	□□□□□ -1.18
SED1	YDR077W	RXT3	Q07458	294 aa		7.65	□□□□□ -1.18
SED1	YDR077W	LDS2	Q08218	356 aa		7.65	□□□□□ -1.18
SED1	YDR077W	GPI2	P46961	280 aa		7.64	□□□□□ -1.19
SED1	YDR077W	HIT1	P46973	164 aa		7.64	□□□□□ -1.19
SED1	YDR077W	APS2	Q00381	147 aa		7.64	□□□□□ -1.19
SED1	YDR077W	NAT3	Q06504	195 aa		7.64	□□□□□ -1.19
SED1	YDR077W	PBP4	Q07362	185 aa	Known RBP	7.64	□□□□□ -1.19
SED1	YDR077W	MRPL33	P20084	86 aa		7.63	□□□□□ -1.19
SED1	YDR077W	YPS1	P32329	569 aa		7.63	□□□□□ -1.19
SED1	YDR077W	PIC2	P40035	300 aa		7.63	□□□□□ -1.19
SED1	YDR077W	FIT2	Q08906	153 aa		7.63	□□□□□ -1.19
SED1	YDR077W	YOP1	Q12402	180 aa		7.63	□□□□□ -1.19
SED1	YDR077W	FMP49	A0A023PZB3	126 aa		7.62	□□□□□ -1.19
SED1	YDR077W	NHP6A	P11632	93 aa	Known RBP	7.62	□□□□□ -1.19
SED1	YDR077W	POF1	P25576	258 aa		7.62	□□□□□ -1.19
SED1	YDR077W	YHR173C	P38864	112 aa		7.62	□□□□□ -1.19
SED1	YDR077W	YPL108W	Q02872	168 aa	Predicted RBP	7.62	□□□□□ -1.19
SED1	YDR077W	MRX11	Q03079	207 aa		7.62	□□□□□ -1.19
SED1	YDR077W	IRC23	Q08416	157 aa		7.62	□□□□□ -1.19
SED1	YDR077W	SMT3	Q12306	101 aa	Known RBP	7.62	□□□□□ -1.19
SED1	YDR077W	RPB9	P27999	122 aa		7.61	□□□□□ -1.19
SED1	YDR077W	NNK1	P36003	928 aa		7.61	□□□□□ -1.19
SED1	YDR077W	PHD1	P36093	366 aa		7.61	□□□□□ -1.19
SED1	YDR077W	PRS4	P38063	326 aa	Predicted RBP	7.61	□□□□□ -1.19
SED1	YDR077W	LSM2	P38203	95 aa	Known RBP	7.61	□□□□□ -1.19
SED1	YDR077W	YIL163C	P40448	117 aa		7.61	□□□□□ -1.19
SED1	YDR077W	WWM1	P43582	211 aa	Known RBP	7.61	□□□□□ -1.19
SED1	YDR077W	OCA2	P53949	197 aa		7.61	□□□□□ -1.19
SED1	YDR077W	AYT1	Q12226	474 aa		7.61	□□□□□ -1.19
SED1	YDR077W	DCN1	Q12395	269 aa		7.61	□□□□□ -1.19
SED1	YDR077W	COX2	P00410	251 aa		7.6	□□□□□ -1.19
SED1	YDR077W	RPL15A	P05748	204 aa	Known RBP	7.6	□□□□□ -1.19
SED1	YDR077W	PAU5	P43575	122 aa		7.6	□□□□□ -1.19
SED1	YDR077W	SWT21	P53873	357 aa	Predicted RBP	7.6	□□□□□ -1.19
SED1	YDR077W	FYV6	P53913	173 aa		7.6	□□□□□ -1.19
SED1	YDR077W	RPL15B	P54780	204 aa	Predicted RBP	7.6	□□□□□ -1.19
SED1	YDR077W	SRL1	Q08673	210 aa		7.6	□□□□□ -1.19
SED1	YDR077W	YER145C-A	A0A023PYF4	145 aa		7.59	□□□□□ -1.19
SED1	YDR077W	YER188W	P40103	239 aa		7.59	□□□□□ -1.19
SED1	YDR077W	CPD1	P53314	239 aa		7.59	□□□□□ -1.19
SED1	YDR077W	RAV2	Q03956	351 aa		7.59	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms