RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C COQ10Q08058 207 aa3.25□□□□□ -1.89
PRP11YDL043C PPT2Q12036 173 aa3.25□□□□□ -1.89
PRP11YDL043C YPL245WQ12179 454 aaKnown RBP3.25□□□□□ -1.89
PRP11YDL043C TIR4Q12218 487 aaPredicted RBP3.25□□□□□ -1.89
PRP11YDL043C PCL9Q12477 304 aa3.25□□□□□ -1.89
PRP11YDL043C YLR412C-AQ3E742 68 aa3.25□□□□□ -1.89
PRP11YDL043C YBL112CQ3E7Y4 105 aa3.25□□□□□ -1.89
PRP11YDL043C YCL021W-AQ96VH3 125 aa3.25□□□□□ -1.89
PRP11YDL043C RPL2AP0CX45 254 aaKnown RBP3.24□□□□□ -1.89
PRP11YDL043C RPL2BP0CX46 254 aaKnown RBP3.24□□□□□ -1.89
PRP11YDL043C MSI1P13712 422 aa3.24□□□□□ -1.89
PRP11YDL043C UBC5P15732 148 aa3.24□□□□□ -1.89
PRP11YDL043C MRPL20P22354 195 aaPredicted RBP3.24□□□□□ -1.89
PRP11YDL043C SRP21P32342 167 aa3.24□□□□□ -1.89
PRP11YDL043C SDH4P37298 181 aa3.24□□□□□ -1.89
PRP11YDL043C YBR063CP38083 404 aa3.24□□□□□ -1.89
PRP11YDL043C MRP21P38175 177 aa3.24□□□□□ -1.89
PRP11YDL043C ATG12P38316 186 aa3.24□□□□□ -1.89
PRP11YDL043C PHO89P38361 574 aa3.24□□□□□ -1.89
PRP11YDL043C CAT5P41735 233 aa3.24□□□□□ -1.89
PRP11YDL043C CWP2P43497 92 aa3.24□□□□□ -1.89
PRP11YDL043C LCB3P47013 409 aa3.24□□□□□ -1.89
PRP11YDL043C CLD1P53264 445 aa3.24□□□□□ -1.89
PRP11YDL043C YMR090WQ04304 227 aaKnown RBP3.24□□□□□ -1.89
PRP11YDL043C KEI1Q06346 221 aa3.24□□□□□ -1.89
PRP11YDL043C YPR174CQ06616 221 aaPredicted RBP3.24□□□□□ -1.89
PRP11YDL043C RAF1Q06891 181 aa3.24□□□□□ -1.89
PRP11YDL043C FIT3Q08907 204 aa3.24□□□□□ -1.89
PRP11YDL043C RFM1Q12192 310 aa3.24□□□□□ -1.89
PRP11YDL043C YER078W-AQ3E7A2 54 aa3.24□□□□□ -1.89
PRP11YDL043C IGO2Q9P305 131 aa3.24□□□□□ -1.89
PRP11YDL043C CDC25P04821 1589 aa3.24□□□□□ -1.89
PRP11YDL043C RPS25BP0C0T4 108 aaKnown RBP3.23□□□□□ -1.89
PRP11YDL043C HSP26P15992 214 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PRP11YDL043C UTR5P32630 166 aa3.23□□□□□ -1.89
PRP11YDL043C ZRT1P32804 376 aa3.23□□□□□ -1.89
PRP11YDL043C VMA11P32842 164 aa3.23□□□□□ -1.89
PRP11YDL043C ARN2P38724 620 aa3.23□□□□□ -1.89
PRP11YDL043C SFT1P43682 97 aa3.23□□□□□ -1.89
PRP11YDL043C BAT2P47176 376 aaKnown RBP3.23□□□□□ -1.89
PRP11YDL043C CAX4P53223 239 aa3.23□□□□□ -1.89
PRP11YDL043C CPD1P53314 239 aa3.23□□□□□ -1.89
PRP11YDL043C LSM7P53905 115 aaKnown RBP3.23□□□□□ -1.89
PRP11YDL043C MRPS16Q02608 121 aa3.23□□□□□ -1.89
PRP11YDL043C YPL039WQ03080 316 aa3.23□□□□□ -1.89
PRP11YDL043C ADD37Q03233 198 aa3.23□□□□□ -1.89
PRP11YDL043C YMR103CQ04436 120 aa3.23□□□□□ -1.89
PRP11YDL043C YMR317WQ04893 1140 aa3.23□□□□□ -1.89
PRP11YDL043C SHH4Q06236 168 aa3.23□□□□□ -1.89
PRP11YDL043C YPL264CQ08980 353 aa3.23□□□□□ -1.89
PRP11YDL043C YPL162CQ12042 273 aa3.23□□□□□ -1.89
PRP11YDL043C YPR145C-AQ2V2P0 78 aa3.23□□□□□ -1.89
PRP11YDL043C RPS25AQ3E792 108 aaPredicted RBP3.23□□□□□ -1.89
PRP11YDL043C RPL22AP05749 121 aaKnown RBP3.22□□□□□ -1.89
PRP11YDL043C SPO13P23624 291 aa3.22□□□□□ -1.89
PRP11YDL043C QRI5P32344 111 aa3.22□□□□□ -1.89
PRP11YDL043C YBR032WP38223 100 aa3.22□□□□□ -1.89
PRP11YDL043C EGT2P42835 1041 aa3.22□□□□□ -1.89
PRP11YDL043C MST27P53176 234 aa3.22□□□□□ -1.89
PRP11YDL043C YGR219WP53307 113 aa3.22□□□□□ -1.89
PRP11YDL043C ERV29P53337 310 aa3.22□□□□□ -1.89
PRP11YDL043C YML079WQ03629 201 aa3.22□□□□□ -1.89
PRP11YDL043C FIT1Q04433 528 aa3.22□□□□□ -1.89
PRP11YDL043C YIL177CP40434 1758 aa3.22□□□□□ -1.89
PRP11YDL043C YJL225CP40889 1758 aa3.22□□□□□ -1.89
PRP11YDL043C CPA1P07258 411 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C TFS1P14306 219 aa3.21□□□□□ -1.9
PRP11YDL043C COX10P21592 462 aa3.21□□□□□ -1.9
PRP11YDL043C RPL16AP26784 199 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C ERG24P32462 438 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C RPL14AP36105 138 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C YKR070WP36151 352 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C YHR138CP38841 114 aaPredicted RBP3.21□□□□□ -1.9
PRP11YDL043C YAR029WP39549 74 aa3.21□□□□□ -1.9
PRP11YDL043C CYB5P40312 120 aa3.21□□□□□ -1.9
PRP11YDL043C PAU15P40585 124 aa3.21□□□□□ -1.9
PRP11YDL043C YJR085CP47131 105 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C BXI1P48558 297 aa3.21□□□□□ -1.9
PRP11YDL043C GAS3Q03655 524 aa3.21□□□□□ -1.9
PRP11YDL043C PBA1Q05778 276 aa3.21□□□□□ -1.9
PRP11YDL043C YPR098CQ06089 161 aa3.21□□□□□ -1.9
PRP11YDL043C RRS1Q08746 203 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C NDD1Q08887 554 aa3.21□□□□□ -1.9
PRP11YDL043C YDL180WQ12301 547 aa3.21□□□□□ -1.9
PRP11YDL043C MPD1Q12404 318 aaKnown RBP3.21□□□□□ -1.9
PRP11YDL043C IZH2Q12442 317 aa3.21□□□□□ -1.9
PRP11YDL043C MHF1Q3E835 90 aa3.21□□□□□ -1.9
PRP11YDL043C MBF1O14467 151 aaKnown RBP3.2□□□□□ -1.9
PRP11YDL043C COX5AP00424 153 aa3.2□□□□□ -1.9
PRP11YDL043C HHF1P02309 103 aaKnown RBP3.2□□□□□ -1.9
PRP11YDL043C HEM4P06174 275 aa3.2□□□□□ -1.9
PRP11YDL043C RPS8AP0CX39 200 aaKnown RBP3.2□□□□□ -1.9
PRP11YDL043C RPS8BP0CX40 200 aaKnown RBP3.2□□□□□ -1.9
PRP11YDL043C RPL30P14120 105 aaKnown RBP3.2□□□□□ -1.9
PRP11YDL043C CSE2P33308 149 aa3.2□□□□□ -1.9
PRP11YDL043C YKL102CP34249 101 aa3.2□□□□□ -1.9
PRP11YDL043C TRS20P38334 175 aa3.2□□□□□ -1.9
PRP11YDL043C YIA6P40556 373 aa3.2□□□□□ -1.9
PRP11YDL043C YFR054CP43622 192 aa3.2□□□□□ -1.9
PRP11YDL043C GPI2P46961 280 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms