RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	FHN1	P53279	174 aa		5.25	□□□□□ -1.57
RSA4	YCR072C	SCW4	P53334	386 aa	Known RBP	5.25	□□□□□ -1.57
RSA4	YCR072C	YMR206W	Q03695	313 aa		5.25	□□□□□ -1.57
RSA4	YCR072C	YCR024C-B	Q3E7Z8	88 aa		5.25	□□□□□ -1.57
RSA4	YCR072C	SCS22	Q6Q595	175 aa		5.25	□□□□□ -1.57
RSA4	YCR072C	YDR157W	A0A023PZE8	133 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	RPL27A	P0C2H6	136 aa	Known RBP	5.24	□□□□□ -1.57
RSA4	YCR072C	RPL27B	P0C2H7	136 aa	Known RBP	5.24	□□□□□ -1.57
RSA4	YCR072C	POX1	P13711	748 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	CDC43	P18898	376 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	CSE2	P33308	149 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	YJL213W	P40896	331 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	GPI2	P46961	280 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	MIC27	P50945	234 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	YLR460C	P54007	376 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	YTH1	Q06102	208 aa	Predicted RBP	5.24	□□□□□ -1.57
RSA4	YCR072C	YOR105W	Q08504	108 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	YBR255C-A	Q3E776	120 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	COA2	Q3E823	68 aa		5.24	□□□□□ -1.57
RSA4	YCR072C	MRS1	P07266	363 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	FCY2	P17064	533 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	MCK1	P21965	375 aa	Known RBP	5.23	□□□□□ -1.57
RSA4	YCR072C	MDH2	P22133	377 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	SWD2	P36104	329 aa	Predicted RBP	5.23	□□□□□ -1.57
RSA4	YCR072C	MOH1	P38191	138 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	YIR016W	P40572	265 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	YGL235W	P53071	178 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	NAT3	Q06504	195 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	UTP23	Q12339	254 aa	Known RBP	5.23	□□□□□ -1.57
RSA4	YCR072C	NPC2	Q12408	173 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	OST2	P46964	130 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	TOS2	P50078	622 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	YIP3	P53633	176 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	YNR064C	P53750	290 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	LIP2	Q06005	328 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	DIC1	Q06143	298 aa		5.23	□□□□□ -1.57
RSA4	YCR072C	RPS22A	P0C0W1	130 aa	Known RBP	5.22	□□□□□ -1.57
RSA4	YCR072C	PDE1	P22434	369 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	ECM14	P38836	430 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	SCS3	P53012	380 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	UBC7	Q02159	165 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	YMR090W	Q04304	227 aa	Known RBP	5.22	□□□□□ -1.57
RSA4	YCR072C	SNT309	Q06091	175 aa	Predicted RBP	5.22	□□□□□ -1.57
RSA4	YCR072C	ATG40	Q99325	256 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	UBA3	Q99344	299 aa		5.22	□□□□□ -1.57
RSA4	YCR072C	RPL18A	P0CX49	186 aa	Known RBP	5.21	□□□□□ -1.58
RSA4	YCR072C	RPL18B	P0CX50	186 aa	Known RBP	5.21	□□□□□ -1.58
RSA4	YCR072C	RPL12A	P0CX53	165 aa	Known RBP	5.21	□□□□□ -1.58
RSA4	YCR072C	RPL12B	P0CX54	165 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	SRP14	P38985	146 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	ELO1	P39540	310 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	CRZ1	P53968	678 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	YMR310C	Q04867	317 aa	Predicted RBP	5.21	□□□□□ -1.58
RSA4	YCR072C	DGA1	Q08650	418 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	PRP46	Q12417	451 aa	Predicted RBP	5.21	□□□□□ -1.58
RSA4	YCR072C	YER175W-A	Q8TGU4	54 aa		5.21	□□□□□ -1.58
RSA4	YCR072C	CYC3	P06182	269 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	RPS28B	P0C0X0	67 aa	Known RBP	5.2	□□□□□ -1.58
RSA4	YCR072C	SGE1	P33335	543 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	YER076C	P40049	302 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	YLR152C	P54072	576 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	VPS71	Q03433	280 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	BET5	Q03630	159 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	NUP53	Q03790	475 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	LPP1	Q04396	274 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	YLR296W	Q05898	108 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	ARC18	Q05933	178 aa	Known RBP	5.2	□□□□□ -1.58
RSA4	YCR072C	YDL211C	Q12121	372 aa		5.2	□□□□□ -1.58
RSA4	YCR072C	POC4	Q12245	148 aa	Predicted RBP	5.2	□□□□□ -1.58
RSA4	YCR072C	RPS28A	Q3E7X9	67 aa	Predicted RBP	5.2	□□□□□ -1.58
RSA4	YCR072C	HEM4	P06174	275 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	YBR121C-A	P0C5L4	52 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	CUP2	P15315	225 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	SHB17	P36136	271 aa	Known RBP	5.19	□□□□□ -1.58
RSA4	YCR072C	MIC12	P38341	106 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	YGL118C	P53132	145 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	MSO1	P53604	210 aa	Known RBP	5.19	□□□□□ -1.58
RSA4	YCR072C	TRM112	P53738	135 aa	Predicted RBP	5.19	□□□□□ -1.58
RSA4	YCR072C	SMT3	Q12306	101 aa	Known RBP	5.19	□□□□□ -1.58
RSA4	YCR072C	JID1	Q12350	301 aa		5.19	□□□□□ -1.58
RSA4	YCR072C	SOD1	P00445	154 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	RAD6	P06104	172 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	YSR3	P23501	404 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	SRP21	P32342	167 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	TIR2	P33890	251 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	PAM17	P36147	197 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	TRM7	P38238	310 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	ANS1	P38832	159 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	YAR068W	P39564	161 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	TIF34	P40217	347 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	YFR020W	P43600	232 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	ARP3	P47117	449 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	YDL186W	P48568	277 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	PAM18	Q07914	168 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	YKL023C-A	Q2V2P3	75 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	CCH1	P50077	2039 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	HMRA1	P0CY11	126 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	KRE1	P17260	313 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	YBR090C	P38253	122 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	CRH1	P53301	507 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms