RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YBR096WP38256 230 aa2.45□□□□□ -2.02
RIM1YCR028C-A CUE1P38428 203 aa2.45□□□□□ -2.02
RIM1YCR028C-A RPL14BP38754 138 aaKnown RBP2.45□□□□□ -2.02
RIM1YCR028C-A NSA2P40078 261 aaKnown RBP2.45□□□□□ -2.02
RIM1YCR028C-A RFC2P40348 353 aa2.45□□□□□ -2.02
RIM1YCR028C-A RIB4P50861 169 aaPredicted RBP2.45□□□□□ -2.02
RIM1YCR028C-A LST7P53237 242 aa2.45□□□□□ -2.02
RIM1YCR028C-A PDR17P53844 350 aa2.45□□□□□ -2.02
RIM1YCR028C-A SAE3P89114 91 aa2.45□□□□□ -2.02
RIM1YCR028C-A ATC1Q04005 294 aa2.45□□□□□ -2.02
RIM1YCR028C-A SEN15Q04675 128 aa2.45□□□□□ -2.02
RIM1YCR028C-A CTS2Q06350 511 aa2.45□□□□□ -2.02
RIM1YCR028C-A PRP11Q07350 266 aaPredicted RBP2.45□□□□□ -2.02
RIM1YCR028C-A NIP7Q08962 181 aaKnown RBP2.45□□□□□ -2.02
RIM1YCR028C-A USB1Q12208 290 aaKnown RBP2.45□□□□□ -2.02
RIM1YCR028C-A YDL085C-AQ3E7B7 68 aaKnown RBP2.45□□□□□ -2.02
RIM1YCR028C-A YNR034W-AQ3E841 98 aa2.45□□□□□ -2.02
RIM1YCR028C-A YIL134C-AQ45U18 67 aa2.45□□□□□ -2.02
RIM1YCR028C-A YLR365WQ7LIF2 110 aa2.45□□□□□ -2.02
RIM1YCR028C-A YAL064W-BO13512 126 aa2.44□□□□□ -2.02
RIM1YCR028C-A RPS16AP0CX51 143 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A RPS16BP0CX52 143 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A URA5P13298 226 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A RPL30P14120 105 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A QCR9P22289 66 aa2.44□□□□□ -2.02
RIM1YCR028C-A SPO13P23624 291 aa2.44□□□□□ -2.02
RIM1YCR028C-A OCH1P31755 480 aa2.44□□□□□ -2.02
RIM1YCR028C-A ERG2P32352 222 aa2.44□□□□□ -2.02
RIM1YCR028C-A TCA17P32613 152 aa2.44□□□□□ -2.02
RIM1YCR028C-A RPS27AP35997 82 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A SHB17P36136 271 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A RPS27BP38711 82 aa2.44□□□□□ -2.02
RIM1YCR028C-A RTC3P38804 111 aaPredicted RBP2.44□□□□□ -2.02
RIM1YCR028C-A RPB11P38902 120 aa2.44□□□□□ -2.02
RIM1YCR028C-A RRT13P40042 185 aa2.44□□□□□ -2.02
RIM1YCR028C-A TIF34P40217 347 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A YFR054CP43622 192 aa2.44□□□□□ -2.02
RIM1YCR028C-A TTI2P47168 421 aa2.44□□□□□ -2.02
RIM1YCR028C-A OST3P48439 350 aa2.44□□□□□ -2.02
RIM1YCR028C-A SWS2P53937 143 aa2.44□□□□□ -2.02
RIM1YCR028C-A DAD3P69850 94 aa2.44□□□□□ -2.02
RIM1YCR028C-A YPL039WQ03080 316 aa2.44□□□□□ -2.02
RIM1YCR028C-A RDL2Q08742 149 aaKnown RBP2.44□□□□□ -2.02
RIM1YCR028C-A POM33Q12164 279 aa2.44□□□□□ -2.02
RIM1YCR028C-A FRE8Q12209 686 aa2.44□□□□□ -2.02
RIM1YCR028C-A ATG5Q12380 294 aa2.44□□□□□ -2.02
RIM1YCR028C-A COA2Q3E823 68 aa2.44□□□□□ -2.02
RIM1YCR028C-A FMP49A0A023PZB3 126 aa2.43□□□□□ -2.02
RIM1YCR028C-A RPS22AP0C0W1 130 aaKnown RBP2.43□□□□□ -2.02
RIM1YCR028C-A RPL31AP0C2H8 113 aaKnown RBP2.43□□□□□ -2.02
RIM1YCR028C-A YLL053CP0CD98 152 aa2.43□□□□□ -2.02
RIM1YCR028C-A BGL2P15703 313 aaKnown RBP2.43□□□□□ -2.02
RIM1YCR028C-A MXR2P25566 168 aa2.43□□□□□ -2.02
RIM1YCR028C-A PEX4P29340 183 aa2.43□□□□□ -2.02
RIM1YCR028C-A YUH1P35127 236 aa2.43□□□□□ -2.02
RIM1YCR028C-A SRX1P36077 127 aa2.43□□□□□ -2.02
RIM1YCR028C-A SWD2P36104 329 aaPredicted RBP2.43□□□□□ -2.02
RIM1YCR028C-A FIG1P38224 298 aa2.43□□□□□ -2.02
RIM1YCR028C-A TRM9P49957 279 aa2.43□□□□□ -2.02
RIM1YCR028C-A HHT1P61830 136 aa2.43□□□□□ -2.02
RIM1YCR028C-A CWC27Q02770 301 aa2.43□□□□□ -2.02
RIM1YCR028C-A YDR102CQ03864 110 aa2.43□□□□□ -2.02
RIM1YCR028C-A FRQ1Q06389 190 aa2.43□□□□□ -2.02
RIM1YCR028C-A RFU1Q08003 200 aa2.43□□□□□ -2.02
RIM1YCR028C-A YOR186WQ08560 144 aa2.43□□□□□ -2.02
RIM1YCR028C-A YPL264CQ08980 353 aa2.43□□□□□ -2.02
RIM1YCR028C-A PRR2Q12310 699 aa2.43□□□□□ -2.02
RIM1YCR028C-A PRP46Q12417 451 aaPredicted RBP2.43□□□□□ -2.02
RIM1YCR028C-A HUT1Q12520 339 aa2.43□□□□□ -2.02
RIM1YCR028C-A YPR108W-AQ3E7B3 70 aa2.43□□□□□ -2.02
RIM1YCR028C-A YHR214C-EQ8TGK0 99 aa2.43□□□□□ -2.02
RIM1YCR028C-A YOL085CQ99345 113 aa2.43□□□□□ -2.02
RIM1YCR028C-A RPS25BP0C0T4 108 aaKnown RBP2.42□□□□□ -2.02
RIM1YCR028C-A HAP3P13434 144 aa2.42□□□□□ -2.02
RIM1YCR028C-A SCO1P23833 295 aa2.42□□□□□ -2.02
RIM1YCR028C-A YGL010WP25338 174 aa2.42□□□□□ -2.02
RIM1YCR028C-A AHT1P29589 182 aa2.42□□□□□ -2.02
RIM1YCR028C-A HMX1P32339 317 aa2.42□□□□□ -2.02
RIM1YCR028C-A HSP150P32478 413 aa2.42□□□□□ -2.02
RIM1YCR028C-A RPB7P34087 171 aa2.42□□□□□ -2.02
RIM1YCR028C-A PCL7P40186 285 aa2.42□□□□□ -2.02
RIM1YCR028C-A CCS1P40202 249 aaKnown RBP2.42□□□□□ -2.02
RIM1YCR028C-A CYB5P40312 120 aa2.42□□□□□ -2.02
RIM1YCR028C-A YIL086CP40503 102 aa2.42□□□□□ -2.02
RIM1YCR028C-A CIS3P47001 227 aa2.42□□□□□ -2.02
RIM1YCR028C-A YPL077CQ02831 240 aa2.42□□□□□ -2.02
RIM1YCR028C-A SEI1Q06058 285 aa2.42□□□□□ -2.02
RIM1YCR028C-A ARR2Q06597 130 aa2.42□□□□□ -2.02
RIM1YCR028C-A YRA1Q12159 226 aaKnown RBP2.42□□□□□ -2.02
RIM1YCR028C-A SMT3Q12306 101 aaKnown RBP2.42□□□□□ -2.02
RIM1YCR028C-A PAA1Q12447 191 aaKnown RBP2.42□□□□□ -2.02
RIM1YCR028C-A RPS25AQ3E792 108 aaPredicted RBP2.42□□□□□ -2.02
RIM1YCR028C-A YIL002W-AQ3E7Z5 69 aa2.42□□□□□ -2.02
RIM1YCR028C-A YPR014CQ6B0W2 109 aa2.42□□□□□ -2.02
RIM1YCR028C-A HUG1Q6Q5K6 68 aa2.42□□□□□ -2.02
RIM1YCR028C-A ATG40Q99325 256 aa2.42□□□□□ -2.02
RIM1YCR028C-A COX5BP00425 151 aa2.41□□□□□ -2.02
RIM1YCR028C-A YHR214C-DP0CX93 97 aa2.41□□□□□ -2.02
RIM1YCR028C-A FCY2P17064 533 aa2.41□□□□□ -2.02
RIM1YCR028C-A SAG1P20840 650 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms