RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C PAC10P48363 199 aa1.19□□□□□ -2.22
RPB5YBR154C YDC1Q02896 317 aa1.19□□□□□ -2.22
RPB5YBR154C PKR1Q03880 122 aaKnown RBP1.19□□□□□ -2.22
RPB5YBR154C RRP17Q04031 235 aaPredicted RBP1.19□□□□□ -2.22
RPB5YBR154C YHP1Q04116 353 aa1.19□□□□□ -2.22
RPB5YBR154C RIM9Q04734 239 aa1.19□□□□□ -2.22
RPB5YBR154C UPS1Q05776 175 aa1.19□□□□□ -2.22
RPB5YBR154C YPD1Q07688 167 aa1.19□□□□□ -2.22
RPB5YBR154C ATG41Q12048 136 aa1.19□□□□□ -2.22
RPB5YBR154C PST2Q12335 198 aaKnown RBP1.19□□□□□ -2.22
RPB5YBR154C MSB2P32334 1306 aa1.18□□□□□ -2.22
RPB5YBR154C QCR8P08525 94 aa1.18□□□□□ -2.22
RPB5YBR154C RPB7P34087 171 aa1.18□□□□□ -2.22
RPB5YBR154C HTD2P38790 280 aaKnown RBP1.18□□□□□ -2.22
RPB5YBR154C FIP1P45976 327 aa1.18□□□□□ -2.22
RPB5YBR154C YAE1P47118 141 aaPredicted RBP1.18□□□□□ -2.22
RPB5YBR154C RCE1Q03530 315 aa1.18□□□□□ -2.22
RPB5YBR154C LIP1Q03579 150 aa1.18□□□□□ -2.22
RPB5YBR154C YDR102CQ03864 110 aa1.18□□□□□ -2.22
RPB5YBR154C RAV2Q03956 351 aa1.18□□□□□ -2.22
RPB5YBR154C UPS3Q04006 179 aa1.18□□□□□ -2.22
RPB5YBR154C YDR391CQ04170 232 aa1.18□□□□□ -2.22
RPB5YBR154C STF2P16965 84 aa1.17□□□□□ -2.22
RPB5YBR154C IPI1P38803 334 aaPredicted RBP1.17□□□□□ -2.22
RPB5YBR154C YER181CP40097 107 aa1.17□□□□□ -2.22
RPB5YBR154C CCS1P40202 249 aaKnown RBP1.17□□□□□ -2.22
RPB5YBR154C MPM1P40364 252 aa1.17□□□□□ -2.22
RPB5YBR154C HYR1P40581 163 aaKnown RBP1.17□□□□□ -2.22
RPB5YBR154C CCC1P47818 322 aa1.17□□□□□ -2.22
RPB5YBR154C CWC27Q02770 301 aa1.17□□□□□ -2.22
RPB5YBR154C ATG10Q07879 167 aa1.17□□□□□ -2.22
RPB5YBR154C YNL146C-AQ3E7Z1 64 aa1.17□□□□□ -2.22
RPB5YBR154C FPR1P20081 114 aaKnown RBP1.16□□□□□ -2.22
RPB5YBR154C YBL010CP32788 280 aa1.16□□□□□ -2.22
RPB5YBR154C YHL042WP38729 150 aa1.16□□□□□ -2.22
RPB5YBR154C MOB1P40484 314 aa1.16□□□□□ -2.22
RPB5YBR154C YGL193CP53097 103 aa1.16□□□□□ -2.22
RPB5YBR154C YNR064CP53750 290 aa1.16□□□□□ -2.22
RPB5YBR154C MZM1Q03429 123 aaPredicted RBP1.16□□□□□ -2.22
RPB5YBR154C YML079WQ03629 201 aa1.16□□□□□ -2.22
RPB5YBR154C YPR114WQ06107 315 aa1.16□□□□□ -2.22
RPB5YBR154C HRD1Q08109 551 aa1.16□□□□□ -2.22
RPB5YBR154C YMR030W-AQ3E760 96 aa1.16□□□□□ -2.22
RPB5YBR154C YOR1P53049 1477 aa1.16□□□□□ -2.22
RPB5YBR154C SPS2P08459 502 aa1.15□□□□□ -2.23
RPB5YBR154C YPT31P38555 223 aaKnown RBP1.15□□□□□ -2.23
RPB5YBR154C YAP3P38749 330 aa1.15□□□□□ -2.23
RPB5YBR154C SOK1P40317 901 aa1.15□□□□□ -2.23
RPB5YBR154C YGR269WP40326 108 aa1.15□□□□□ -2.23
RPB5YBR154C YJR015WP47090 510 aa1.15□□□□□ -2.23
RPB5YBR154C YMR252CQ04814 134 aa1.15□□□□□ -2.23
RPB5YBR154C UIP4Q08926 304 aa1.15□□□□□ -2.23
RPB5YBR154C INO4P13902 151 aa1.14□□□□□ -2.23
RPB5YBR154C PHO13P19881 312 aa1.14□□□□□ -2.23
RPB5YBR154C MRPL24P36525 258 aaPredicted RBP1.14□□□□□ -2.23
RPB5YBR154C YEL067CP39978 195 aa1.14□□□□□ -2.23
RPB5YBR154C RBL2P48606 106 aaKnown RBP1.14□□□□□ -2.23
RPB5YBR154C UBC7Q02159 165 aa1.14□□□□□ -2.23
RPB5YBR154C ELP6Q04868 273 aa1.14□□□□□ -2.23
RPB5YBR154C YMR320WQ04897 101 aa1.14□□□□□ -2.23
RPB5YBR154C YLR422WQ06409 1932 aa1.13□□□□□ -2.23
RPB5YBR154C FAS1P07149 2051 aaKnown RBP1.13□□□□□ -2.23
RPB5YBR154C SEN2P16658 377 aa1.13□□□□□ -2.23
RPB5YBR154C MRS4P23500 304 aa1.13□□□□□ -2.23
RPB5YBR154C SPT14P32363 452 aa1.13□□□□□ -2.23
RPB5YBR154C YJL218WP40892 196 aaKnown RBP1.13□□□□□ -2.23
RPB5YBR154C YFL065CP43539 102 aa1.13□□□□□ -2.23
RPB5YBR154C YDL241WQ07738 123 aa1.13□□□□□ -2.23
RPB5YBR154C RPS25BP0C0T4 108 aaKnown RBP1.12□□□□□ -2.23
RPB5YBR154C DDR48P18899 430 aaKnown RBP1.12□□□□□ -2.23
RPB5YBR154C ACP1P32463 125 aa1.12□□□□□ -2.23
RPB5YBR154C ETR1P38071 380 aa1.12□□□□□ -2.23
RPB5YBR154C YEL008WP40001 126 aa1.12□□□□□ -2.23
RPB5YBR154C YGR201CP42936 225 aa1.12□□□□□ -2.23
RPB5YBR154C YDR366CP87287 132 aa1.12□□□□□ -2.23
RPB5YBR154C MET31Q03081 177 aa1.12□□□□□ -2.23
RPB5YBR154C RRT7Q07829 113 aa1.12□□□□□ -2.23
RPB5YBR154C YDL157CQ12082 118 aa1.12□□□□□ -2.23
RPB5YBR154C RPS25AQ3E792 108 aaPredicted RBP1.12□□□□□ -2.23
RPB5YBR154C SPA2P23201 1466 aaKnown RBP1.12□□□□□ -2.23
RPB5YBR154C HSP12P22943 109 aaKnown RBP1.11□□□□□ -2.23
RPB5YBR154C RPC19P28000 142 aaKnown RBP1.11□□□□□ -2.23
RPB5YBR154C AHT1P29589 182 aa1.11□□□□□ -2.23
RPB5YBR154C SRP21P32342 167 aa1.11□□□□□ -2.23
RPB5YBR154C CIN5P40917 295 aa1.11□□□□□ -2.23
RPB5YBR154C GPI2P46961 280 aa1.11□□□□□ -2.23
RPB5YBR154C GEP7P53171 287 aa1.11□□□□□ -2.23
RPB5YBR154C ATP19P81451 68 aa1.11□□□□□ -2.23
RPB5YBR154C COF1Q03048 143 aaKnown RBP1.11□□□□□ -2.23
RPB5YBR154C RFU1Q08003 200 aa1.11□□□□□ -2.23
RPB5YBR154C COA3Q3E7B2 85 aa1.11□□□□□ -2.23
RPB5YBR154C TAR1Q8TGM6 124 aa1.11□□□□□ -2.23
RPB5YBR154C TAF2P23255 1407 aa1.11□□□□□ -2.23
RPB5YBR154C DUR1,2P32528 1835 aaKnown RBP1.1□□□□□ -2.23
RPB5YBR154C ADE6P38972 1358 aaKnown RBP1.1□□□□□ -2.23
RPB5YBR154C YCL042WP25572 119 aa1.1□□□□□ -2.23
RPB5YBR154C CYC2P38909 366 aa1.1□□□□□ -2.23
RPB5YBR154C YGR039WP53225 103 aa1.1□□□□□ -2.23
RPB5YBR154C HHO1P53551 258 aa1.1□□□□□ -2.23
RPB5YBR154C RCF2P53721 224 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 235.5 ms