RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C DOG1P38774 246 aa5.08□□□□□ -1.6
VPS4YPR173C SHO1P40073 367 aa5.08□□□□□ -1.6
VPS4YPR173C YIL169CP40442 995 aa5.08□□□□□ -1.6
VPS4YPR173C GEP7P53171 287 aa5.08□□□□□ -1.6
VPS4YPR173C PCP1P53259 346 aa5.08□□□□□ -1.6
VPS4YPR173C DUG3P53871 357 aa5.08□□□□□ -1.6
VPS4YPR173C YPL067CQ02754 198 aa5.08□□□□□ -1.6
VPS4YPR173C SHH3Q04487 196 aa5.08□□□□□ -1.6
VPS4YPR173C YMR254CQ04838 102 aa5.08□□□□□ -1.6
VPS4YPR173C YML053CQ04978 212 aa5.08□□□□□ -1.6
VPS4YPR173C HRD1Q08109 551 aa5.08□□□□□ -1.6
VPS4YPR173C YOL024WQ08172 172 aa5.08□□□□□ -1.6
VPS4YPR173C LDS2Q08218 356 aa5.08□□□□□ -1.6
VPS4YPR173C YOR105WQ08504 108 aa5.08□□□□□ -1.6
VPS4YPR173C SMT3Q12306 101 aaKnown RBP5.08□□□□□ -1.6
VPS4YPR173C TMA7Q3E764 64 aaKnown RBP5.08□□□□□ -1.6
VPS4YPR173C ATG40Q99325 256 aa5.08□□□□□ -1.6
VPS4YPR173C FCY2P17064 533 aa5.07□□□□□ -1.6
VPS4YPR173C YCR007CP25354 239 aa5.07□□□□□ -1.6
VPS4YPR173C HMX1P32339 317 aa5.07□□□□□ -1.6
VPS4YPR173C SRP21P32342 167 aa5.07□□□□□ -1.6
VPS4YPR173C ELF1P36053 145 aa5.07□□□□□ -1.6
VPS4YPR173C UBS1P38290 277 aa5.07□□□□□ -1.6
VPS4YPR173C AME1P38313 324 aa5.07□□□□□ -1.6
VPS4YPR173C CFD1P40558 293 aa5.07□□□□□ -1.6
VPS4YPR173C TRM9P49957 279 aa5.07□□□□□ -1.6
VPS4YPR173C YIP5P53108 310 aa5.07□□□□□ -1.6
VPS4YPR173C YGR050CP53231 118 aa5.07□□□□□ -1.6
VPS4YPR173C YGR151CP53287 111 aa5.07□□□□□ -1.6
VPS4YPR173C RPL21AQ02753 160 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C YMR007WQ03675 126 aa5.07□□□□□ -1.6
VPS4YPR173C TRS23Q03784 219 aa5.07□□□□□ -1.6
VPS4YPR173C PKR1Q03880 122 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C LOA1Q06508 300 aa5.07□□□□□ -1.6
VPS4YPR173C ARR3Q06598 404 aa5.07□□□□□ -1.6
VPS4YPR173C YFH1Q07540 174 aa5.07□□□□□ -1.6
VPS4YPR173C TPT1Q12272 230 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C RPL21BQ12672 160 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C RPS22BQ3E7Y3 130 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C CDC39P25655 2108 aaKnown RBP5.07□□□□□ -1.6
VPS4YPR173C MSI1P13712 422 aa5.06□□□□□ -1.6
VPS4YPR173C SAG1P20840 650 aa5.06□□□□□ -1.6
VPS4YPR173C IMG2P25642 146 aaPredicted RBP5.06□□□□□ -1.6
VPS4YPR173C SOF1P33750 489 aaKnown RBP5.06□□□□□ -1.6
VPS4YPR173C PMU1P36069 295 aa5.06□□□□□ -1.6
VPS4YPR173C AGE2P40529 298 aa5.06□□□□□ -1.6
VPS4YPR173C IZH1Q03419 316 aa5.06□□□□□ -1.6
VPS4YPR173C YMR166CQ03829 368 aa5.06□□□□□ -1.6
VPS4YPR173C RIM9Q04734 239 aa5.06□□□□□ -1.6
VPS4YPR173C TRI1Q05024 226 aa5.06□□□□□ -1.6
VPS4YPR173C CNL1Q06333 122 aa5.06□□□□□ -1.6
VPS4YPR173C SWT1Q12104 458 aa5.06□□□□□ -1.6
VPS4YPR173C USV1Q12132 391 aa5.06□□□□□ -1.6
VPS4YPR173C FAS1P07149 2051 aaKnown RBP5.06□□□□□ -1.6
VPS4YPR173C HTB1P02293 131 aaKnown RBP5.05□□□□□ -1.6
VPS4YPR173C HTB2P02294 131 aa5.05□□□□□ -1.6
VPS4YPR173C RPS16AP0CX51 143 aaKnown RBP5.05□□□□□ -1.6
VPS4YPR173C RPS16BP0CX52 143 aaKnown RBP5.05□□□□□ -1.6
VPS4YPR173C YHR214C-DP0CX93 97 aa5.05□□□□□ -1.6
VPS4YPR173C RNA15P25299 296 aaPredicted RBP5.05□□□□□ -1.6
VPS4YPR173C UTR5P32630 166 aa5.05□□□□□ -1.6
VPS4YPR173C PSD1P39006 500 aa5.05□□□□□ -1.6
VPS4YPR173C YER134CP40081 178 aa5.05□□□□□ -1.6
VPS4YPR173C YIL029CP40538 142 aa5.05□□□□□ -1.6
VPS4YPR173C REE1P40893 198 aa5.05□□□□□ -1.6
VPS4YPR173C RPA43P46669 326 aa5.05□□□□□ -1.6
VPS4YPR173C ARP3P47117 449 aaKnown RBP5.05□□□□□ -1.6
VPS4YPR173C BOR1P53838 576 aa5.05□□□□□ -1.6
VPS4YPR173C YDR366CP87287 132 aa5.05□□□□□ -1.6
VPS4YPR173C CSI2Q08054 341 aa5.05□□□□□ -1.6
VPS4YPR173C YOL118CQ08259 102 aa5.05□□□□□ -1.6
VPS4YPR173C YDL157CQ12082 118 aa5.05□□□□□ -1.6
VPS4YPR173C YOR192C-CQ3E736 78 aa5.05□□□□□ -1.6
VPS4YPR173C YLR415CO13578 112 aa5.04□□□□□ -1.6
VPS4YPR173C PRE1P22141 198 aaKnown RBP5.04□□□□□ -1.6
VPS4YPR173C DER1P38307 211 aa5.04□□□□□ -1.6
VPS4YPR173C SRP14P38985 146 aa5.04□□□□□ -1.6
VPS4YPR173C YER079WP40052 210 aaKnown RBP5.04□□□□□ -1.6
VPS4YPR173C PRE5P40302 234 aaKnown RBP5.04□□□□□ -1.6
VPS4YPR173C DFG10P40526 253 aa5.04□□□□□ -1.6
VPS4YPR173C XPT1P47165 209 aa5.04□□□□□ -1.6
VPS4YPR173C PGU1P47180 361 aa5.04□□□□□ -1.6
VPS4YPR173C CPD1P53314 239 aa5.04□□□□□ -1.6
VPS4YPR173C SUN4P53616 420 aa5.04□□□□□ -1.6
VPS4YPR173C YNR064CP53750 290 aa5.04□□□□□ -1.6
VPS4YPR173C CGI121Q03705 181 aaKnown RBP5.04□□□□□ -1.6
VPS4YPR173C FIT3Q08907 204 aa5.04□□□□□ -1.6
VPS4YPR173C YPS3Q12303 508 aa5.04□□□□□ -1.6
VPS4YPR173C MPD1Q12404 318 aaKnown RBP5.04□□□□□ -1.6
VPS4YPR173C BOL1Q3E793 110 aa5.04□□□□□ -1.6
VPS4YPR173C BLM10P43583 2143 aa5.04□□□□□ -1.6
VPS4YPR173C FAB1P34756 2278 aa5.04□□□□□ -1.6
VPS4YPR173C SOD1P00445 154 aaKnown RBP5.03□□□□□ -1.6
VPS4YPR173C HMRA1P0CY11 126 aa5.03□□□□□ -1.6
VPS4YPR173C MIG1P27705 504 aa5.03□□□□□ -1.6
VPS4YPR173C IMP1P28627 190 aa5.03□□□□□ -1.6
VPS4YPR173C MCH2P36032 473 aa5.03□□□□□ -1.6
VPS4YPR173C AIM29P36154 155 aa5.03□□□□□ -1.6
VPS4YPR173C YHR138CP38841 114 aaPredicted RBP5.03□□□□□ -1.6
VPS4YPR173C UME6P39001 836 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms