RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C PRE3P38624 215 aa6.76□□□□□ -1.33
SRP54YPR088C YJL213WP40896 331 aa6.76□□□□□ -1.33
SRP54YPR088C YJL163CP46996 555 aa6.76□□□□□ -1.33
SRP54YPR088C GNP1P48813 663 aa6.76□□□□□ -1.33
SRP54YPR088C MCH1Q07376 486 aa6.76□□□□□ -1.33
SRP54YPR088C PCC1Q3E833 88 aa6.76□□□□□ -1.33
SRP54YPR088C TDH1P00360 332 aaKnown RBP6.75□□□□□ -1.33
SRP54YPR088C SOD1P00445 154 aaKnown RBP6.75□□□□□ -1.33
SRP54YPR088C DAL3P32459 195 aa6.75□□□□□ -1.33
SRP54YPR088C RPS0AP32905 252 aaKnown RBP6.75□□□□□ -1.33
SRP54YPR088C RPL14AP36105 138 aaKnown RBP6.75□□□□□ -1.33
SRP54YPR088C QDR3P38227 689 aa6.75□□□□□ -1.33
SRP54YPR088C RPL14BP38754 138 aaKnown RBP6.75□□□□□ -1.33
SRP54YPR088C MIC27P50945 234 aa6.75□□□□□ -1.33
SRP54YPR088C PAU4P53427 120 aa6.75□□□□□ -1.33
SRP54YPR088C AVO2Q04749 426 aa6.75□□□□□ -1.33
SRP54YPR088C CTR3Q06686 241 aa6.75□□□□□ -1.33
SRP54YPR088C RKI1Q12189 258 aa6.75□□□□□ -1.33
SRP54YPR088C ILV5P06168 395 aaKnown RBP6.74□□□□□ -1.33
SRP54YPR088C SUA7P29055 345 aaPredicted RBP6.74□□□□□ -1.33
SRP54YPR088C YPT31P38555 223 aaKnown RBP6.74□□□□□ -1.33
SRP54YPR088C POG1P40473 351 aa6.74□□□□□ -1.33
SRP54YPR088C YMR007WQ03675 126 aa6.74□□□□□ -1.33
SRP54YPR088C YHP1Q04116 353 aa6.74□□□□□ -1.33
SRP54YPR088C SME1Q12330 94 aaPredicted RBP6.74□□□□□ -1.33
SRP54YPR088C YCL042WP25572 119 aa6.73□□□□□ -1.33
SRP54YPR088C SHH3Q04487 196 aa6.73□□□□□ -1.33
SRP54YPR088C POS5Q06892 414 aa6.73□□□□□ -1.33
SRP54YPR088C PAA1Q12447 191 aaKnown RBP6.73□□□□□ -1.33
SRP54YPR088C PIS1P06197 220 aaKnown RBP6.72□□□□□ -1.33
SRP54YPR088C PAU1P0CE88 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU14P0CE89 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU6P0CE90 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU18P0CE91 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU8P0CE92 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU11P0CE93 120 aa6.72□□□□□ -1.33
SRP54YPR088C ALK2P32789 676 aaPredicted RBP6.72□□□□□ -1.33
SRP54YPR088C YBL071CP38185 102 aa6.72□□□□□ -1.33
SRP54YPR088C DER1P38307 211 aa6.72□□□□□ -1.33
SRP54YPR088C PAU13P38725 120 aa6.72□□□□□ -1.33
SRP54YPR088C YAR068WP39564 161 aa6.72□□□□□ -1.33
SRP54YPR088C PIC2P40035 300 aa6.72□□□□□ -1.33
SRP54YPR088C PAU10Q03050 120 aa6.72□□□□□ -1.33
SRP54YPR088C YML108WQ03759 105 aa6.72□□□□□ -1.33
SRP54YPR088C YMR166CQ03829 368 aa6.72□□□□□ -1.33
SRP54YPR088C YMR253CQ04835 414 aa6.72□□□□□ -1.33
SRP54YPR088C PAU20Q08322 120 aa6.72□□□□□ -1.33
SRP54YPR088C PAU9Q3E770 120 aa6.72□□□□□ -1.33
SRP54YPR088C YER145C-AA0A023PYF4 145 aa6.72□□□□□ -1.33
SRP54YPR088C YMR316C-AI2HB70 103 aa6.72□□□□□ -1.33
SRP54YPR088C RPB9P27999 122 aa6.72□□□□□ -1.33
SRP54YPR088C CSH1P38287 376 aa6.72□□□□□ -1.33
SRP54YPR088C PTC7P38797 343 aa6.72□□□□□ -1.33
SRP54YPR088C RTS2P40962 232 aa6.72□□□□□ -1.33
SRP54YPR088C SAS2P40963 338 aa6.72□□□□□ -1.33
SRP54YPR088C SNO1Q03144 224 aa6.72□□□□□ -1.33
SRP54YPR088C TY1A-DR4O74302 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-AP0CX57 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-PR1P0CX58 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-ORP0CX59 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-PR2P0CX60 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-DR5P0CX65 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-ER2P0CX66 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-GR3P0CX67 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-LR1P0CX68 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-MR2P0CX69 440 aa6.71□□□□□ -1.34
SRP54YPR088C BDH1P39714 382 aa6.71□□□□□ -1.34
SRP54YPR088C TAX4P47030 604 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-JR2P47099 440 aa6.71□□□□□ -1.34
SRP54YPR088C TIM11P81449 96 aaPredicted RBP6.71□□□□□ -1.34
SRP54YPR088C TY1A-DR1Q03856 440 aa6.71□□□□□ -1.34
SRP54YPR088C ATC1Q04005 294 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-ML1Q04706 440 aaKnown RBP6.71□□□□□ -1.34
SRP54YPR088C TY1A-BRQ12217 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-NL2Q12470 440 aa6.71□□□□□ -1.34
SRP54YPR088C TY1A-GR2Q12485 440 aa6.71□□□□□ -1.34
SRP54YPR088C RPL15AP05748 204 aaKnown RBP6.7□□□□□ -1.34
SRP54YPR088C GPP2P40106 250 aaKnown RBP6.7□□□□□ -1.34
SRP54YPR088C YGR018CP53211 109 aa6.7□□□□□ -1.34
SRP54YPR088C LST7P53237 242 aa6.7□□□□□ -1.34
SRP54YPR088C RPL15BP54780 204 aaPredicted RBP6.7□□□□□ -1.34
SRP54YPR088C YCR022CP25620 114 aa6.69□□□□□ -1.34
SRP54YPR088C FEN2P25621 512 aaKnown RBP6.69□□□□□ -1.34
SRP54YPR088C MRPL38P35996 138 aaPredicted RBP6.69□□□□□ -1.34
SRP54YPR088C AVT5P38176 459 aa6.69□□□□□ -1.34
SRP54YPR088C DOG2P38773 246 aa6.69□□□□□ -1.34
SRP54YPR088C DOG1P38774 246 aa6.69□□□□□ -1.34
SRP54YPR088C LOC1P43586 204 aaPredicted RBP6.69□□□□□ -1.34
SRP54YPR088C YPL108WQ02872 168 aaPredicted RBP6.69□□□□□ -1.34
SRP54YPR088C DFR1P07807 211 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SRP54YPR088C MRP2P10663 115 aaPredicted RBP6.68□□□□□ -1.34
SRP54YPR088C SEC59P20048 519 aa6.68□□□□□ -1.34
SRP54YPR088C YGL015CP33199 130 aa6.68□□□□□ -1.34
SRP54YPR088C CDS1P38221 457 aa6.68□□□□□ -1.34
SRP54YPR088C LSM4P40070 187 aaKnown RBP6.68□□□□□ -1.34
SRP54YPR088C PHS1P40857 217 aa6.68□□□□□ -1.34
SRP54YPR088C ERV2Q12284 196 aa6.68□□□□□ -1.34
SRP54YPR088C WWM1P43582 211 aaKnown RBP6.68□□□□□ -1.34
SRP54YPR088C SDH7Q04401 133 aa6.68□□□□□ -1.34
SRP54YPR088C RXT3Q07458 294 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms