RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YGR018CP53211 109 aa3.66□□□□□ -1.82
SSO1YPL232W YGR025WP53216 100 aa3.66□□□□□ -1.82
SSO1YPL232W GRX3Q03835 250 aa3.66□□□□□ -1.82
SSO1YPL232W THI74Q04083 370 aa3.66□□□□□ -1.82
SSO1YPL232W YPL162CQ12042 273 aa3.66□□□□□ -1.82
SSO1YPL232W ATG5Q12380 294 aa3.66□□□□□ -1.82
SSO1YPL232W PAA1Q12447 191 aaKnown RBP3.66□□□□□ -1.82
SSO1YPL232W RPL2AP0CX45 254 aaKnown RBP3.65□□□□□ -1.83
SSO1YPL232W RPL2BP0CX46 254 aaKnown RBP3.65□□□□□ -1.83
SSO1YPL232W RPS11AP0CX47 156 aaKnown RBP3.65□□□□□ -1.83
SSO1YPL232W RPS11BP0CX48 156 aaKnown RBP3.65□□□□□ -1.83
SSO1YPL232W ANB1P19211 157 aa3.65□□□□□ -1.83
SSO1YPL232W LCB3P47013 409 aa3.65□□□□□ -1.83
SSO1YPL232W YJR015WP47090 510 aa3.65□□□□□ -1.83
SSO1YPL232W YGR050CP53231 118 aa3.65□□□□□ -1.83
SSO1YPL232W DYN2Q02647 92 aa3.65□□□□□ -1.83
SSO1YPL232W YLR031WQ07978 186 aa3.65□□□□□ -1.83
SSO1YPL232W SCP1Q08873 200 aa3.65□□□□□ -1.83
SSO1YPL232W ZRC1P20107 442 aa3.64□□□□□ -1.83
SSO1YPL232W VMA16P23968 213 aa3.64□□□□□ -1.83
SSO1YPL232W YCR022CP25620 114 aa3.64□□□□□ -1.83
SSO1YPL232W AVT5P38176 459 aa3.64□□□□□ -1.83
SSO1YPL232W PTC7P38797 343 aa3.64□□□□□ -1.83
SSO1YPL232W SPO19Q03029 223 aa3.64□□□□□ -1.83
SSO1YPL232W PAM18Q07914 168 aa3.64□□□□□ -1.83
SSO1YPL232W YPR063CQ12160 140 aa3.64□□□□□ -1.83
SSO1YPL232W CPR4P25334 318 aa3.63□□□□□ -1.83
SSO1YPL232W HOM6P31116 359 aaKnown RBP3.63□□□□□ -1.83
SSO1YPL232W RNP1P32385 249 aa3.63□□□□□ -1.83
SSO1YPL232W COS8P38723 381 aa3.63□□□□□ -1.83
SSO1YPL232W BDH1P39714 382 aa3.63□□□□□ -1.83
SSO1YPL232W NSA2P40078 261 aaKnown RBP3.63□□□□□ -1.83
SSO1YPL232W YER135CP40082 130 aa3.63□□□□□ -1.83
SSO1YPL232W YIR035CP40579 254 aa3.63□□□□□ -1.83
SSO1YPL232W CAT5P41735 233 aa3.63□□□□□ -1.83
SSO1YPL232W IMP2P46972 177 aa3.63□□□□□ -1.83
SSO1YPL232W FRQ1Q06389 190 aa3.63□□□□□ -1.83
SSO1YPL232W YPS3Q12303 508 aa3.63□□□□□ -1.83
SSO1YPL232W YHR213WP0CI67 198 aa3.62□□□□□ -1.83
SSO1YPL232W POP8P38208 133 aa3.62□□□□□ -1.83
SSO1YPL232W CSH1P38287 376 aa3.62□□□□□ -1.83
SSO1YPL232W LAG1P38703 411 aa3.62□□□□□ -1.83
SSO1YPL232W WSS1P38838 269 aa3.62□□□□□ -1.83
SSO1YPL232W LOA1Q06508 300 aa3.62□□□□□ -1.83
SSO1YPL232W PRM4Q12498 284 aa3.62□□□□□ -1.83
SSO1YPL232W YJL197C-AP0C5P0 93 aa3.61□□□□□ -1.83
SSO1YPL232W URA5P13298 226 aaKnown RBP3.61□□□□□ -1.83
SSO1YPL232W GOS1P38736 223 aa3.61□□□□□ -1.83
SSO1YPL232W RTC3P38804 111 aaPredicted RBP3.61□□□□□ -1.83
SSO1YPL232W LSM1P47017 172 aaKnown RBP3.61□□□□□ -1.83
SSO1YPL232W MCM22P47167 239 aa3.61□□□□□ -1.83
SSO1YPL232W FMP41P53889 259 aaKnown RBP3.61□□□□□ -1.83
SSO1YPL232W GIM3P53900 129 aa3.61□□□□□ -1.83
SSO1YPL232W YOR385WQ08909 290 aa3.61□□□□□ -1.83
SSO1YPL232W YPL229WQ99395 206 aa3.61□□□□□ -1.83
SSO1YPL232W CDC7P06243 507 aa3.6□□□□□ -1.83
SSO1YPL232W RPL24BP24000 155 aaKnown RBP3.6□□□□□ -1.83
SSO1YPL232W YCR025CP25352 136 aa3.6□□□□□ -1.83
SSO1YPL232W ERV15P38312 142 aa3.6□□□□□ -1.83
SSO1YPL232W YHR122WP38829 231 aa3.6□□□□□ -1.83
SSO1YPL232W BFR1P38934 470 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SSO1YPL232W MIT1P40002 666 aa3.6□□□□□ -1.83
SSO1YPL232W IRC22P40006 225 aa3.6□□□□□ -1.83
SSO1YPL232W HXT14P42833 540 aa3.6□□□□□ -1.83
SSO1YPL232W HST4P53688 370 aa3.6□□□□□ -1.83
SSO1YPL232W DCS1Q06151 350 aa3.6□□□□□ -1.83
SSO1YPL232W SUS1Q6WNK7 96 aa3.6□□□□□ -1.83
SSO1YPL232W PIS1P06197 220 aaKnown RBP3.59□□□□□ -1.83
SSO1YPL232W QCR2P07257 368 aa3.59□□□□□ -1.83
SSO1YPL232W FPR2P32472 135 aa3.59□□□□□ -1.83
SSO1YPL232W NNK1P36003 928 aa3.59□□□□□ -1.83
SSO1YPL232W VHS2P40463 436 aa3.59□□□□□ -1.83
SSO1YPL232W AIM24P47127 394 aa3.59□□□□□ -1.83
SSO1YPL232W ORM1P53224 222 aa3.59□□□□□ -1.83
SSO1YPL232W LST7P53237 242 aa3.59□□□□□ -1.83
SSO1YPL232W HCH1P53834 153 aa3.59□□□□□ -1.83
SSO1YPL232W SMX3P54999 86 aaPredicted RBP3.59□□□□□ -1.83
SSO1YPL232W UBC7Q02159 165 aa3.59□□□□□ -1.83
SSO1YPL232W SDH7Q04401 133 aa3.59□□□□□ -1.83
SSO1YPL232W YOL160WQ08321 113 aa3.59□□□□□ -1.83
SSO1YPL232W YOR283WQ12040 230 aaKnown RBP3.59□□□□□ -1.83
SSO1YPL232W CRC1Q12289 327 aa3.59□□□□□ -1.83
SSO1YPL232W YCR075W-AQ3E830 75 aa3.59□□□□□ -1.83
SSO1YPL232W MRP17P28778 131 aa3.58□□□□□ -1.84
SSO1YPL232W PAN3P36102 679 aaPredicted RBP3.58□□□□□ -1.84
SSO1YPL232W PEX7P39108 375 aa3.58□□□□□ -1.84
SSO1YPL232W ILM1P47155 203 aa3.58□□□□□ -1.84
SSO1YPL232W POC4Q12245 148 aaPredicted RBP3.58□□□□□ -1.84
SSO1YPL232W MRP2P10663 115 aaPredicted RBP3.57□□□□□ -1.84
SSO1YPL232W MRPL4P36517 319 aa3.57□□□□□ -1.84
SSO1YPL232W GPX2P38143 162 aa3.57□□□□□ -1.84
SSO1YPL232W RRF1P38771 230 aa3.57□□□□□ -1.84
SSO1YPL232W GVP36P40531 326 aaKnown RBP3.57□□□□□ -1.84
SSO1YPL232W GTF1P53260 183 aaPredicted RBP3.57□□□□□ -1.84
SSO1YPL232W IZH1Q03419 316 aa3.57□□□□□ -1.84
SSO1YPL232W YLR224WQ05947 369 aa3.57□□□□□ -1.84
SSO1YPL232W CCW12Q12127 133 aa3.57□□□□□ -1.84
SSO1YPL232W YBR126W-AQ8TGU7 68 aa3.57□□□□□ -1.84
SSO1YPL232W SIT1P39980 628 aa3.56□□□□□ -1.84
SSO1YPL232W YFL067WP43537 175 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms