RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeast

Gene CSM4, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM4	YPL200W	RTC4	P53850	401 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	RRP17	Q04031	235 aa	Predicted RBP	0.65	□□□□□ -2.31
CSM4	YPL200W	ARO80	Q04052	950 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	FYV12	Q08559	129 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	GET4	Q12125	312 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	YOR015W	Q12169	119 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.65	□□□□□ -2.31
CSM4	YPL200W	YPR014C	Q6B0W2	109 aa		0.65	□□□□□ -2.31
CSM4	YPL200W	STF2	P16965	84 aa		0.64	□□□□□ -2.31
CSM4	YPL200W	MAK5	P38112	773 aa	Predicted RBP	0.64	□□□□□ -2.31
CSM4	YPL200W	NSA2	P40078	261 aa	Known RBP	0.64	□□□□□ -2.31
CSM4	YPL200W	YIL102C	P40488	101 aa		0.64	□□□□□ -2.31
CSM4	YPL200W	YFL051C	P43552	160 aa		0.64	□□□□□ -2.31
CSM4	YPL200W	GPI14	P47088	403 aa	Known RBP	0.64	□□□□□ -2.31
CSM4	YPL200W	YOL024W	Q08172	172 aa		0.64	□□□□□ -2.31
CSM4	YPL200W	DGK1	Q12382	290 aa		0.64	□□□□□ -2.31
CSM4	YPL200W	QCR7	P00128	127 aa		0.63	□□□□□ -2.31
CSM4	YPL200W	TRX3	P25372	127 aa		0.63	□□□□□ -2.31
CSM4	YPL200W	YKT6	P36015	200 aa	Known RBP	0.63	□□□□□ -2.31
CSM4	YPL200W	MPM1	P40364	252 aa		0.63	□□□□□ -2.31
CSM4	YPL200W	TAH1	P25638	111 aa	Predicted RBP	0.62	□□□□□ -2.31
CSM4	YPL200W	NSG1	P38837	291 aa		0.62	□□□□□ -2.31
CSM4	YPL200W	FIT1	Q04433	528 aa		0.62	□□□□□ -2.31
CSM4	YPL200W	DAS2	Q12084	232 aa		0.62	□□□□□ -2.31
CSM4	YPL200W	YOR342C	Q12182	319 aa		0.62	□□□□□ -2.31
CSM4	YPL200W	YLR412C-A	Q3E742	68 aa		0.62	□□□□□ -2.31
CSM4	YPL200W	YBL010C	P32788	280 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	YAR064W	P39563	99 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	PGA1	P53896	198 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	NRK1	P53915	240 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	TIM11	P81449	96 aa	Predicted RBP	0.61	□□□□□ -2.31
CSM4	YPL200W	CWC21	Q03375	135 aa	Known RBP	0.61	□□□□□ -2.31
CSM4	YPL200W	AIM34	Q03673	198 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	CCW12	Q12127	133 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	ATP20	Q12233	115 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	YMR030W-A	Q3E760	96 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	RIF1	P29539	1916 aa		0.61	□□□□□ -2.31
CSM4	YPL200W	CAF4	P36130	643 aa		0.6	□□□□□ -2.31
CSM4	YPL200W	ETR1	P38071	380 aa		0.6	□□□□□ -2.31
CSM4	YPL200W	DCV1	P43595	202 aa		0.6	□□□□□ -2.31
CSM4	YPL200W	HHT1	P61830	136 aa		0.6	□□□□□ -2.31
CSM4	YPL200W	YHP1	Q04116	353 aa		0.6	□□□□□ -2.31
CSM4	YPL200W	ADE1	P27616	306 aa		0.59	□□□□□ -2.31
CSM4	YPL200W	RRT1	P38192	103 aa		0.59	□□□□□ -2.31
CSM4	YPL200W	UPS1	Q05776	175 aa		0.59	□□□□□ -2.31
CSM4	YPL200W	MPD1	Q12404	318 aa	Known RBP	0.59	□□□□□ -2.31
CSM4	YPL200W	DML1	Q03652	475 aa		0.58	□□□□□ -2.32
CSM4	YPL200W	ELP6	Q04868	273 aa		0.58	□□□□□ -2.32
CSM4	YPL200W	NOC4	Q06512	552 aa	Predicted RBP	0.58	□□□□□ -2.32
CSM4	YPL200W	ATG41	Q12048	136 aa		0.58	□□□□□ -2.32
CSM4	YPL200W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
CSM4	YPL200W	MAK31	P23059	88 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	HSP30	P25619	332 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	CCS1	P40202	249 aa	Known RBP	0.57	□□□□□ -2.32
CSM4	YPL200W	NSE4	P43124	402 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	FMP32	P43557	207 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	VPS28	Q02767	242 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	GAL83	Q04739	417 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	RAD9	P14737	1309 aa		0.57	□□□□□ -2.32
CSM4	YPL200W	PRE1	P22141	198 aa	Known RBP	0.56	□□□□□ -2.32
CSM4	YPL200W	AHC2	P25649	128 aa		0.56	□□□□□ -2.32
CSM4	YPL200W	YJR015W	P47090	510 aa		0.56	□□□□□ -2.32
CSM4	YPL200W	SHH4	Q06236	168 aa		0.56	□□□□□ -2.32
CSM4	YPL200W	JIP3	O13555	125 aa		0.55	□□□□□ -2.32
CSM4	YPL200W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.55	□□□□□ -2.32	not detected
CSM4	YPL200W	SHG1	P38337	142 aa		0.55	□□□□□ -2.32
CSM4	YPL200W	TIM13	P53299	105 aa		0.55	□□□□□ -2.32
CSM4	YPL200W	YDC1	Q02896	317 aa		0.55	□□□□□ -2.32
CSM4	YPL200W	GRX8	Q05926	109 aa		0.55	□□□□□ -2.32
CSM4	YPL200W	RFC2	P40348	353 aa		0.54	□□□□□ -2.32
CSM4	YPL200W	YOR214C	Q12282	236 aa		0.54	□□□□□ -2.32
CSM4	YPL200W	HFA1	P32874	2273 aa		0.53	□□□□□ -2.32
CSM4	YPL200W	SEC14	P24280	304 aa	Known RBP	0.53	□□□□□ -2.32
CSM4	YPL200W	YKL102C	P34249	101 aa		0.53	□□□□□ -2.32
CSM4	YPL200W	YKR005C	Q02203	525 aa		0.53	□□□□□ -2.32
CSM4	YPL200W	RIM9	Q04734	239 aa		0.53	□□□□□ -2.32
CSM4	YPL200W	SHB17	P36136	271 aa	Known RBP	0.52	□□□□□ -2.33
CSM4	YPL200W	YKR070W	P36151	352 aa	Known RBP	0.52	□□□□□ -2.33
CSM4	YPL200W	MOB1	P40484	314 aa		0.52	□□□□□ -2.33
CSM4	YPL200W	GPI17	Q04080	534 aa		0.52	□□□□□ -2.33
CSM4	YPL200W	KEI1	Q06346	221 aa		0.52	□□□□□ -2.33
CSM4	YPL200W	HRD1	Q08109	551 aa		0.52	□□□□□ -2.33
CSM4	YPL200W	YOR381W-A	Q3E804	55 aa		0.52	□□□□□ -2.33
CSM4	YPL200W	PRP8	P33334	2413 aa	Known RBP	0.52	□□□□□ -2.33
CSM4	YPL200W	RAD6	P06104	172 aa		0.51	□□□□□ -2.33
CSM4	YPL200W	CPR5	P35176	225 aa		0.51	□□□□□ -2.33
CSM4	YPL200W	BRX1	Q08235	291 aa	Known RBP	0.51	□□□□□ -2.33
CSM4	YPL200W	YDL157C	Q12082	118 aa		0.51	□□□□□ -2.33
CSM4	YPL200W	YCR001W	P25347	104 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	CLG1	P35190	452 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	FYV4	P38783	130 aa	Predicted RBP	0.5	□□□□□ -2.33
CSM4	YPL200W	HOP2	P53187	214 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	SNO1	Q03144	224 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	YML079W	Q03629	201 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	AVO2	Q04749	426 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	YPR127W	Q06494	345 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	YET3	Q07451	203 aa		0.5	□□□□□ -2.33
CSM4	YPL200W	YNL200C	P40165	246 aa	Known RBP	0.49	□□□□□ -2.33
CSM4	YPL200W	POG1	P40473	351 aa		0.49	□□□□□ -2.33
CSM4	YPL200W	TMA23	Q03525	211 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms