RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W PET20Q99373 253 aa3.54□□□□□ -1.84
RRP40YOL142W NHP6BP11633 99 aaKnown RBP3.53□□□□□ -1.84
RRP40YOL142W SEN2P16658 377 aa3.53□□□□□ -1.84
RRP40YOL142W ATG22P25568 528 aa3.53□□□□□ -1.84
RRP40YOL142W TRR1P29509 319 aaKnown RBP3.53□□□□□ -1.84
RRP40YOL142W RNP1P32385 249 aa3.53□□□□□ -1.84
RRP40YOL142W VMA11P32842 164 aa3.53□□□□□ -1.84
RRP40YOL142W PDC2P32896 925 aa3.53□□□□□ -1.84
RRP40YOL142W RPB7P34087 171 aa3.53□□□□□ -1.84
RRP40YOL142W CPR5P35176 225 aa3.53□□□□□ -1.84
RRP40YOL142W YHL044WP38727 235 aa3.53□□□□□ -1.84
RRP40YOL142W LSM1P47017 172 aaKnown RBP3.53□□□□□ -1.84
RRP40YOL142W AIM25P47140 327 aa3.53□□□□□ -1.84
RRP40YOL142W SOL1P50278 321 aa3.53□□□□□ -1.84
RRP40YOL142W PRM15Q03262 622 aa3.53□□□□□ -1.84
RRP40YOL142W FSH2Q05015 223 aa3.53□□□□□ -1.84
RRP40YOL142W YDR286CQ05530 114 aa3.53□□□□□ -1.84
RRP40YOL142W CSI2Q08054 341 aa3.53□□□□□ -1.84
RRP40YOL142W ATP16Q12165 160 aa3.53□□□□□ -1.84
RRP40YOL142W RAX2Q12465 1220 aa3.53□□□□□ -1.84
RRP40YOL142W YLR365WQ7LIF2 110 aa3.53□□□□□ -1.84
RRP40YOL142W ATG40Q99325 256 aa3.53□□□□□ -1.84
RRP40YOL142W SPS2P08459 502 aa3.52□□□□□ -1.85
RRP40YOL142W MIR1P23641 311 aaKnown RBP3.52□□□□□ -1.85
RRP40YOL142W LDS1P31379 325 aa3.52□□□□□ -1.85
RRP40YOL142W YHC3P47040 408 aa3.52□□□□□ -1.85
RRP40YOL142W OKP1P53298 406 aa3.52□□□□□ -1.85
RRP40YOL142W HSK3P69852 69 aa3.52□□□□□ -1.85
RRP40YOL142W FIT1Q04433 528 aa3.52□□□□□ -1.85
RRP40YOL142W ECM18Q04623 453 aa3.52□□□□□ -1.85
RRP40YOL142W RFM1Q12192 310 aa3.52□□□□□ -1.85
RRP40YOL142W YPR108W-AQ3E7B3 70 aa3.52□□□□□ -1.85
RRP40YOL142W TPI1P00942 248 aaKnown RBP3.51□□□□□ -1.85
RRP40YOL142W RPL23AP0CX41 137 aaKnown RBP3.51□□□□□ -1.85
RRP40YOL142W RPL23BP0CX42 137 aaKnown RBP3.51□□□□□ -1.85
RRP40YOL142W FUS3P16892 353 aaKnown RBP3.51□□□□□ -1.85
RRP40YOL142W BUD23P25627 275 aaPredicted RBP3.51□□□□□ -1.85
RRP40YOL142W SPS18P32572 300 aa3.51□□□□□ -1.85
RRP40YOL142W MRPL3P36516 390 aa3.51□□□□□ -1.85
RRP40YOL142W YBR242WP38331 238 aa3.51□□□□□ -1.85
RRP40YOL142W POP2P39008 433 aa3.51□□□□□ -1.85
RRP40YOL142W RSM27P53305 110 aa3.51□□□□□ -1.85
RRP40YOL142W YML018CQ03730 393 aa3.51□□□□□ -1.85
RRP40YOL142W NOC4Q06512 552 aaPredicted RBP3.51□□□□□ -1.85
RRP40YOL142W PRP11Q07350 266 aaPredicted RBP3.51□□□□□ -1.85
RRP40YOL142W YFH1Q07540 174 aa3.51□□□□□ -1.85
RRP40YOL142W YOR292CQ08743 309 aa3.51□□□□□ -1.85
RRP40YOL142W MED4Q12343 284 aa3.51□□□□□ -1.85
RRP40YOL142W BBP1Q12365 385 aa3.51□□□□□ -1.85
RRP40YOL142W DGK1Q12382 290 aa3.51□□□□□ -1.85
RRP40YOL142W TFC7Q12415 435 aa3.51□□□□□ -1.85
RRP40YOL142W UBA3Q99344 299 aa3.51□□□□□ -1.85
RRP40YOL142W PUT1P09368 476 aa3.5□□□□□ -1.85
RRP40YOL142W YCR016WP25617 290 aaKnown RBP3.5□□□□□ -1.85
RRP40YOL142W PAN3P36102 679 aaPredicted RBP3.5□□□□□ -1.85
RRP40YOL142W ADH5P38113 351 aaKnown RBP3.5□□□□□ -1.85
RRP40YOL142W POP8P38208 133 aa3.5□□□□□ -1.85
RRP40YOL142W BMT5P40493 336 aa3.5□□□□□ -1.85
RRP40YOL142W YJL118WP47022 219 aa3.5□□□□□ -1.85
RRP40YOL142W NIF3P53081 288 aa3.5□□□□□ -1.85
RRP40YOL142W SLX9P53251 210 aaPredicted RBP3.5□□□□□ -1.85
RRP40YOL142W ALG9P53868 555 aaKnown RBP3.5□□□□□ -1.85
RRP40YOL142W GIM3P53900 129 aa3.5□□□□□ -1.85
RRP40YOL142W THI74Q04083 370 aa3.5□□□□□ -1.85
RRP40YOL142W RIM9Q04734 239 aa3.5□□□□□ -1.85
RRP40YOL142W RPB9P27999 122 aa3.49□□□□□ -1.85
RRP40YOL142W PPQ1P32945 549 aa3.49□□□□□ -1.85
RRP40YOL142W YUH1P35127 236 aa3.49□□□□□ -1.85
RRP40YOL142W CBT1P36038 271 aaPredicted RBP3.49□□□□□ -1.85
RRP40YOL142W CUE1P38428 203 aa3.49□□□□□ -1.85
RRP40YOL142W WSS1P38838 269 aa3.49□□□□□ -1.85
RRP40YOL142W IKI1P38874 309 aa3.49□□□□□ -1.85
RRP40YOL142W RPA34P47006 233 aaPredicted RBP3.49□□□□□ -1.85
RRP40YOL142W TTI2P47168 421 aa3.49□□□□□ -1.85
RRP40YOL142W YGL114WP53134 725 aa3.49□□□□□ -1.85
RRP40YOL142W MIX17Q03667 156 aa3.49□□□□□ -1.85
RRP40YOL142W VBA1Q04301 562 aa3.49□□□□□ -1.85
RRP40YOL142W ADH6Q04894 360 aaKnown RBP3.49□□□□□ -1.85
RRP40YOL142W SCP1Q08873 200 aa3.49□□□□□ -1.85
RRP40YOL142W RDI1Q12434 202 aa3.49□□□□□ -1.85
RRP40YOL142W BOL1Q3E793 110 aa3.49□□□□□ -1.85
RRP40YOL142W HUG1Q6Q5K6 68 aa3.49□□□□□ -1.85
RRP40YOL142W ARG80P07249 177 aa3.48□□□□□ -1.85
RRP40YOL142W MRP17P28778 131 aa3.48□□□□□ -1.85
RRP40YOL142W MSK1P32048 576 aa3.48□□□□□ -1.85
RRP40YOL142W ERG2P32352 222 aa3.48□□□□□ -1.85
RRP40YOL142W TCA17P32613 152 aa3.48□□□□□ -1.85
RRP40YOL142W UTP30P36144 274 aaKnown RBP3.48□□□□□ -1.85
RRP40YOL142W SMP1P38128 452 aa3.48□□□□□ -1.85
RRP40YOL142W CAB5Q03941 241 aa3.48□□□□□ -1.85
RRP40YOL142W ARR2Q06597 130 aa3.48□□□□□ -1.85
RRP40YOL142W FEX2Q08991 375 aa3.48□□□□□ -1.85
RRP40YOL142W CCW14O13547 238 aa3.47□□□□□ -1.85
RRP40YOL142W QCR2P07257 368 aa3.47□□□□□ -1.85
RRP40YOL142W ROX3P25046 220 aa3.47□□□□□ -1.85
RRP40YOL142W YPC1P38298 316 aa3.47□□□□□ -1.85
RRP40YOL142W BFR1P38934 470 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85 RIP-Chip
RRP40YOL142W PCL7P40186 285 aa3.47□□□□□ -1.85
RRP40YOL142W YMR166CQ03829 368 aa3.47□□□□□ -1.85
RRP40YOL142W YPD1Q07688 167 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 132.7 ms