RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	FYV12	Q08559	129 aa		0.85	□□□□□ -2.27
RRI2	YOL117W	DAS2	Q12084	232 aa		0.85	□□□□□ -2.27
RRI2	YOL117W	YLR412C-A	Q3E742	68 aa		0.85	□□□□□ -2.27
RRI2	YOL117W	MET31	Q03081	177 aa		0.84	□□□□□ -2.27
RRI2	YOL117W	RRP17	Q04031	235 aa	Predicted RBP	0.84	□□□□□ -2.27
RRI2	YOL117W	RPS24A	P0CX31	135 aa	Known RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	RPS24B	P0CX32	135 aa	Known RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	NSG1	P38837	291 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	NRK1	P53915	240 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	YOR015W	Q12169	119 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	TAH1	P25638	111 aa	Predicted RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	ETR1	P38071	380 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	MAK5	P38112	773 aa	Predicted RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	YHL037C	P38733	133 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	NSA2	P40078	261 aa	Known RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	TMA22	P47089	198 aa	Predicted RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	YGL235W	P53071	178 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	CGR1	P53188	120 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	YHP1	Q04116	353 aa		0.83	□□□□□ -2.28
RRI2	YOL117W	NOC4	Q06512	552 aa	Predicted RBP	0.83	□□□□□ -2.28
RRI2	YOL117W	APA2	P22108	325 aa		0.82	□□□□□ -2.28
RRI2	YOL117W	RRT1	P38192	103 aa		0.82	□□□□□ -2.28
RRI2	YOL117W	MPD1	Q12404	318 aa	Known RBP	0.82	□□□□□ -2.28
RRI2	YOL117W	UPS1	Q05776	175 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	RAD9	P14737	1309 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	AHC2	P25649	128 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	UGX2	P32772	223 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	YBL010C	P32788	280 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	YKR041W	P36134	250 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	YNL200C	P40165	246 aa	Known RBP	0.81	□□□□□ -2.28
RRI2	YOL117W	NSE4	P43124	402 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	DGK1	Q12382	290 aa		0.81	□□□□□ -2.28
RRI2	YOL117W	STF2	P16965	84 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	MAK31	P23059	88 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	DML1	Q03652	475 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	AIM34	Q03673	198 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	ELP6	Q04868	273 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	YOR381W-A	Q3E804	55 aa		0.8	□□□□□ -2.28
RRI2	YOL117W	FYV4	P38783	130 aa	Predicted RBP	0.79	□□□□□ -2.28
RRI2	YOL117W	FMP32	P43557	207 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	PIR1	Q03178	341 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	GAL83	Q04739	417 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	GRX8	Q05926	109 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	YPR014C	Q6B0W2	109 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	TRX3	P25372	127 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	CPR5	P35176	225 aa		0.79	□□□□□ -2.28
RRI2	YOL117W	STP22	P25604	385 aa		0.78	□□□□□ -2.28
RRI2	YOL117W	CAF4	P36130	643 aa		0.78	□□□□□ -2.28
RRI2	YOL117W	SBH1	P52870	82 aa		0.78	□□□□□ -2.28
RRI2	YOL117W	AHT1	P29589	182 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	YKL102C	P34249	101 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	SHG1	P38337	142 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	CCS1	P40202	249 aa	Known RBP	0.77	□□□□□ -2.29
RRI2	YOL117W	GPI17	Q04080	534 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	SHH4	Q06236	168 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	ATG41	Q12048	136 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	CLG1	P35190	452 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	YFL051C	P43552	160 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	SNO1	Q03144	224 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	YMR030W-A	Q3E760	96 aa		0.77	□□□□□ -2.29
RRI2	YOL117W	DUR1,2	P32528	1835 aa	Known RBP	0.77	□□□□□ -2.29
RRI2	YOL117W	FIT1	Q04433	528 aa		0.76	□□□□□ -2.29
RRI2	YOL117W	RIM9	Q04734	239 aa		0.76	□□□□□ -2.29
RRI2	YOL117W	CCW12	Q12127	133 aa		0.76	□□□□□ -2.29
RRI2	YOL117W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
RRI2	YOL117W	RFC2	P40348	353 aa		0.76	□□□□□ -2.29
RRI2	YOL117W	SOL1	P50278	321 aa		0.76	□□□□□ -2.29
RRI2	YOL117W	BRX1	Q08235	291 aa	Known RBP	0.76	□□□□□ -2.29
RRI2	YOL117W	SEC14	P24280	304 aa	Known RBP	0.75	□□□□□ -2.29
RRI2	YOL117W	HSP30	P25619	332 aa		0.75	□□□□□ -2.29
RRI2	YOL117W	TTI2	P47168	421 aa		0.75	□□□□□ -2.29
RRI2	YOL117W	NVJ1	P38881	321 aa		0.74	□□□□□ -2.29
RRI2	YOL117W	DCV1	P43595	202 aa		0.74	□□□□□ -2.29
RRI2	YOL117W	JAC1	P53193	184 aa		0.74	□□□□□ -2.29
RRI2	YOL117W	HFA1	P32874	2273 aa		0.74	□□□□□ -2.29
RRI2	YOL117W	SBH2	P52871	88 aa		0.73	□□□□□ -2.29
RRI2	YOL117W	YKR005C	Q02203	525 aa		0.73	□□□□□ -2.29
RRI2	YOL117W	HPT1	Q04178	221 aa	Known RBP	0.73	□□□□□ -2.29
RRI2	YOL117W	YPR127W	Q06494	345 aa		0.73	□□□□□ -2.29
RRI2	YOL117W	YOR214C	Q12282	236 aa		0.73	□□□□□ -2.29
RRI2	YOL117W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
RRI2	YOL117W	SHB17	P36136	271 aa	Known RBP	0.72	□□□□□ -2.29
RRI2	YOL117W	PAC10	P48363	199 aa		0.72	□□□□□ -2.29
RRI2	YOL117W	ATP7	P30902	174 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	YKR070W	P36151	352 aa	Known RBP	0.71	□□□□□ -2.3
RRI2	YOL117W	YGL230C	P53074	147 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	VPS28	Q02767	242 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	GRX5	Q02784	150 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	AVO2	Q04749	426 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	YET3	Q07451	203 aa		0.71	□□□□□ -2.3
RRI2	YOL117W	PRP8	P33334	2413 aa	Known RBP	0.7	□□□□□ -2.3
RRI2	YOL117W	YEL073C	P39974	107 aa		0.7	□□□□□ -2.3
RRI2	YOL117W	POG1	P40473	351 aa		0.7	□□□□□ -2.3
RRI2	YOL117W	YDC1	Q02896	317 aa		0.7	□□□□□ -2.3
RRI2	YOL117W	GRE1	Q08969	168 aa		0.7	□□□□□ -2.3
RRI2	YOL117W	YAR064W	P39563	99 aa		0.69	□□□□□ -2.3
RRI2	YOL117W	YIL102C	P40488	101 aa		0.69	□□□□□ -2.3
RRI2	YOL117W	YJR015W	P47090	510 aa		0.69	□□□□□ -2.3
RRI2	YOL117W	KEI1	Q06346	221 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms