RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YPL119C-AQ3E751 87 aa2.29□□□□□ -2.04
ATG3YNR007C YMR105W-AQ8TGS8 64 aa2.29□□□□□ -2.04
ATG3YNR007C RPL5P26321 297 aaKnown RBP2.28□□□□□ -2.04
ATG3YNR007C YBL010CP32788 280 aa2.28□□□□□ -2.04
ATG3YNR007C YKL063CP35725 167 aa2.28□□□□□ -2.04
ATG3YNR007C UTP30P36144 274 aaKnown RBP2.28□□□□□ -2.04
ATG3YNR007C GOS1P38736 223 aa2.28□□□□□ -2.04
ATG3YNR007C YHR138CP38841 114 aaPredicted RBP2.28□□□□□ -2.04
ATG3YNR007C YCH1P42937 148 aa2.28□□□□□ -2.04
ATG3YNR007C YJL118WP47022 219 aa2.28□□□□□ -2.04
ATG3YNR007C YGR042WP53227 271 aa2.28□□□□□ -2.04
ATG3YNR007C HCH1P53834 153 aa2.28□□□□□ -2.04
ATG3YNR007C HSK3P69852 69 aa2.28□□□□□ -2.04
ATG3YNR007C VBA1Q04301 562 aa2.28□□□□□ -2.04
ATG3YNR007C UTP15Q04305 513 aaKnown RBP2.28□□□□□ -2.04
ATG3YNR007C LPP1Q04396 274 aa2.28□□□□□ -2.04
ATG3YNR007C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
ATG3YNR007C HRD1Q08109 551 aa2.28□□□□□ -2.04
ATG3YNR007C ATG31Q12421 196 aa2.28□□□□□ -2.04
ATG3YNR007C TDH1P00360 332 aaKnown RBP2.27□□□□□ -2.05
ATG3YNR007C URA6P15700 204 aa2.27□□□□□ -2.05
ATG3YNR007C DPB2P24482 689 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C MRPL27P36526 146 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C SDH4P37298 181 aa2.27□□□□□ -2.05
ATG3YNR007C MRPS9P38120 278 aa2.27□□□□□ -2.05
ATG3YNR007C MED8P38304 223 aa2.27□□□□□ -2.05
ATG3YNR007C CUE1P38428 203 aa2.27□□□□□ -2.05
ATG3YNR007C GVP36P40531 326 aaKnown RBP2.27□□□□□ -2.05
ATG3YNR007C LOC1P43586 204 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C LSM1P47017 172 aaKnown RBP2.27□□□□□ -2.05
ATG3YNR007C YJR012CP47087 207 aa2.27□□□□□ -2.05
ATG3YNR007C RPL9BP51401 191 aaKnown RBP2.27□□□□□ -2.05
ATG3YNR007C YGL262WP53054 175 aa2.27□□□□□ -2.05
ATG3YNR007C SLX9P53251 210 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C SSU72P53538 206 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C ALG9P53868 555 aaKnown RBP2.27□□□□□ -2.05
ATG3YNR007C CAB5Q03941 241 aa2.27□□□□□ -2.05
ATG3YNR007C FIT1Q04433 528 aa2.27□□□□□ -2.05
ATG3YNR007C HOR7Q05827 59 aa2.27□□□□□ -2.05
ATG3YNR007C MCH1Q07376 486 aa2.27□□□□□ -2.05
ATG3YNR007C MRPL23Q12487 163 aaPredicted RBP2.27□□□□□ -2.05
ATG3YNR007C HUT1Q12520 339 aa2.27□□□□□ -2.05
ATG3YNR007C YLR099W-AQ3E798 87 aa2.27□□□□□ -2.05
ATG3YNR007C SUS1Q6WNK7 96 aa2.27□□□□□ -2.05
ATG3YNR007C YEL009C-AA0A023PZF2 135 aa2.26□□□□□ -2.05
ATG3YNR007C VPS63O13549 108 aa2.26□□□□□ -2.05
ATG3YNR007C SIR2P06700 562 aa2.26□□□□□ -2.05
ATG3YNR007C RPL18AP0CX49 186 aaKnown RBP2.26□□□□□ -2.05
ATG3YNR007C RPL18BP0CX50 186 aaKnown RBP2.26□□□□□ -2.05
ATG3YNR007C YMR31P19955 123 aa2.26□□□□□ -2.05
ATG3YNR007C MIG1P27705 504 aa2.26□□□□□ -2.05
ATG3YNR007C YPS1P32329 569 aa2.26□□□□□ -2.05
ATG3YNR007C ARO4P32449 370 aaKnown RBP2.26□□□□□ -2.05
ATG3YNR007C SPS18P32572 300 aa2.26□□□□□ -2.05
ATG3YNR007C UTR5P32630 166 aa2.26□□□□□ -2.05
ATG3YNR007C IKI1P38874 309 aa2.26□□□□□ -2.05
ATG3YNR007C GPI14P47088 403 aaKnown RBP2.26□□□□□ -2.05
ATG3YNR007C BXI1P48558 297 aa2.26□□□□□ -2.05
ATG3YNR007C MIX17Q03667 156 aa2.26□□□□□ -2.05
ATG3YNR007C YDR115WQ04598 105 aa2.26□□□□□ -2.05
ATG3YNR007C RAD28Q12021 506 aa2.26□□□□□ -2.05
ATG3YNR007C MED4Q12343 284 aa2.26□□□□□ -2.05
ATG3YNR007C MPD1Q12404 318 aaKnown RBP2.26□□□□□ -2.05
ATG3YNR007C PRM4Q12498 284 aa2.26□□□□□ -2.05
ATG3YNR007C DCP1Q12517 231 aaPredicted RBP2.26□□□□□ -2.05
ATG3YNR007C YLR365WQ7LIF2 110 aa2.26□□□□□ -2.05
ATG3YNR007C TPI1P00942 248 aaKnown RBP2.25□□□□□ -2.05
ATG3YNR007C RPL9AP05738 191 aaKnown RBP2.25□□□□□ -2.05
ATG3YNR007C HIS3P06633 220 aa2.25□□□□□ -2.05
ATG3YNR007C SAR1P20606 190 aaKnown RBP2.25□□□□□ -2.05
ATG3YNR007C INO2P26798 304 aa2.25□□□□□ -2.05
ATG3YNR007C ACP1P32463 125 aa2.25□□□□□ -2.05
ATG3YNR007C KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
ATG3YNR007C MBA1P38300 278 aa2.25□□□□□ -2.05
ATG3YNR007C YNL194CP40169 301 aa2.25□□□□□ -2.05
ATG3YNR007C RPL13BP40212 199 aaKnown RBP2.25□□□□□ -2.05
ATG3YNR007C CDC40P40968 455 aaPredicted RBP2.25□□□□□ -2.05
ATG3YNR007C RPA43P46669 326 aa2.25□□□□□ -2.05
ATG3YNR007C VPS55P47111 140 aa2.25□□□□□ -2.05
ATG3YNR007C DIE2P50076 525 aa2.25□□□□□ -2.05
ATG3YNR007C DOC1P53068 250 aa2.25□□□□□ -2.05
ATG3YNR007C RSM27P53305 110 aa2.25□□□□□ -2.05
ATG3YNR007C YMR166CQ03829 368 aa2.25□□□□□ -2.05
ATG3YNR007C RRG8Q06109 277 aa2.25□□□□□ -2.05
ATG3YNR007C HEM25Q07534 307 aa2.25□□□□□ -2.05
ATG3YNR007C PAM18Q07914 168 aa2.25□□□□□ -2.05
ATG3YNR007C RPL13AQ12690 199 aaPredicted RBP2.25□□□□□ -2.05
ATG3YNR007C YOS1Q3E834 85 aa2.25□□□□□ -2.05
ATG3YNR007C HOM6P31116 359 aaKnown RBP2.24□□□□□ -2.05
ATG3YNR007C OCH1P31755 480 aa2.24□□□□□ -2.05
ATG3YNR007C ERG24P32462 438 aaKnown RBP2.24□□□□□ -2.05
ATG3YNR007C ZRT3P34240 503 aa2.24□□□□□ -2.05
ATG3YNR007C RRF1P38771 230 aa2.24□□□□□ -2.05
ATG3YNR007C MPC2P38857 129 aa2.24□□□□□ -2.05
ATG3YNR007C PCL7P40186 285 aa2.24□□□□□ -2.05
ATG3YNR007C FMP48P53233 369 aa2.24□□□□□ -2.05
ATG3YNR007C MRX11Q03079 207 aa2.24□□□□□ -2.05
ATG3YNR007C MAK3Q03503 176 aa2.24□□□□□ -2.05
ATG3YNR007C YDR114CQ04597 100 aa2.24□□□□□ -2.05
ATG3YNR007C YMR252CQ04814 134 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms