RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	MRX8	Q05473	314 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	YPL162C	Q12042	273 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	RIB3	Q99258	208 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	GCN1	P33892	2672 aa	Known RBP	3.2	□□□□□ -1.9
UBP10	YNL186W	TOM40	P23644	387 aa	Known RBP	3.2	□□□□□ -1.9
UBP10	YNL186W	PRE7	P23724	241 aa	Known RBP	3.2	□□□□□ -1.9
UBP10	YNL186W	YGP1	P38616	354 aa	Known RBP	3.2	□□□□□ -1.9
UBP10	YNL186W	YIL054W	P40524	105 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	YDR249C	Q03787	373 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	TVP15	Q03860	143 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	YDL211C	Q12121	372 aa		3.2	□□□□□ -1.9
UBP10	YNL186W	COX10	P21592	462 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	MRPL27	P36526	146 aa	Predicted RBP	3.19	□□□□□ -1.9
UBP10	YNL186W	VMA22	P38784	181 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	CSN9	Q03981	162 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	YMR320W	Q04897	101 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	BBP1	Q12365	385 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	CSH1	P38287	376 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	YGL101W	P53144	215 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	YPR114W	Q06107	315 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	YOR020W-A	Q3E824	90 aa		3.19	□□□□□ -1.9
UBP10	YNL186W	RPL2A	P0CX45	254 aa	Known RBP	3.18	□□□□□ -1.9
UBP10	YNL186W	RPL2B	P0CX46	254 aa	Known RBP	3.18	□□□□□ -1.9
UBP10	YNL186W	MRPS28	P21771	286 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	SPO13	P23624	291 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	SFC1	P33303	322 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	YBR063C	P38083	404 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	DYN2	Q02647	92 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	YMD8	Q03697	442 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	YPR170W-B	P0C5R9	85 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	CIN5	P40917	295 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	SKI6	P46948	246 aa	Predicted RBP	3.18	□□□□□ -1.9
UBP10	YNL186W	RBL2	P48606	106 aa	Known RBP	3.18	□□□□□ -1.9
UBP10	YNL186W	SML1	Q04964	104 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	SLD7	Q08457	257 aa		3.18	□□□□□ -1.9
UBP10	YNL186W	CKS1	P20486	150 aa	Known RBP	3.17	□□□□□ -1.9
UBP10	YNL186W	ORM1	P53224	222 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	TMA20	P89886	181 aa	Predicted RBP	3.17	□□□□□ -1.9
UBP10	YNL186W	YPL264C	Q08980	353 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	SGA1	P08019	549 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	AIM18	P38884	321 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	YEL028W	P39989	153 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	SNM1	P40993	198 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	CAX4	P53223	239 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	TSA2	Q04120	196 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	MCP1	Q12106	302 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	YOR342C	Q12182	319 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	YMR230W-A	Q3E7B5	62 aa		3.17	□□□□□ -1.9
UBP10	YNL186W	PRP8	P33334	2413 aa	Known RBP	3.16	□□□□□ -1.9
UBP10	YNL186W	FMP27	Q06179	2628 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	RPB3	P16370	318 aa	Known RBP	3.16	□□□□□ -1.9
UBP10	YNL186W	PRS3	P38689	320 aa	Known RBP	3.16	□□□□□ -1.9
UBP10	YNL186W	APQ12	P40532	138 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	SDT1	P53078	280 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	YGL088W	P53151	121 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	YDL180W	Q12301	547 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	PST1	Q12355	444 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	GPI18	P38211	433 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	POP4	P38336	279 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	YEA4	P40004	342 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	RFC2	P40348	353 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	YJR015W	P47090	510 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	APJ1	P53940	528 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	YDR476C	Q03362	224 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	THI74	Q04083	370 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	GEP5	Q12393	293 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	WIP1	Q2V2P8	89 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	TSC3	Q3E790	80 aa		3.16	□□□□□ -1.9
UBP10	YNL186W	REP2	P03872	296 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	Q0255	P03881	472 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	YLR156W	P0CE96	114 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	YLR159W	P0CE97	114 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	YLR161W	P0CE98	114 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	MNN5	P46982	586 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	GPI14	P47088	403 aa	Known RBP	3.15	□□□□□ -1.9
UBP10	YNL186W	LSM3	P57743	89 aa	Known RBP	3.15	□□□□□ -1.9
UBP10	YNL186W	YDR278C	Q05612	105 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	ISD11	Q6Q560	94 aa		3.15	□□□□□ -1.9
UBP10	YNL186W	RAD10	P06838	210 aa		3.15	□□□□□ -1.91
UBP10	YNL186W	RNP1	P32385	249 aa		3.15	□□□□□ -1.91
UBP10	YNL186W	RAV2	Q03956	351 aa		3.15	□□□□□ -1.91
UBP10	YNL186W	SWC7	Q06707	132 aa		3.15	□□□□□ -1.91
UBP10	YNL186W	HRD1	Q08109	551 aa		3.15	□□□□□ -1.91
UBP10	YNL186W	PST2	Q12335	198 aa	Known RBP	3.15	□□□□□ -1.91
UBP10	YNL186W	FMP46	P36141	133 aa	Known RBP	3.14	□□□□□ -1.91
UBP10	YNL186W	SNX4	P47057	423 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	TDA4	P47153	279 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	TTI2	P47168	421 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	LDB18	Q07887	179 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	PSF1	Q12488	208 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	STT4	P37297	1900 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	PBI2	P0CT04	75 aa	Known RBP	3.14	□□□□□ -1.91
UBP10	YNL186W	NHP6A	P11632	93 aa	Known RBP	3.14	□□□□□ -1.91
UBP10	YNL186W	ATP15	P21306	62 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	RCN1	P36054	211 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	YBR285W	P38354	144 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	RPL22B	P56628	122 aa	Known RBP	3.14	□□□□□ -1.91
UBP10	YNL186W	PIR1	Q03178	341 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	DGK1	Q12382	290 aa		3.14	□□□□□ -1.91
UBP10	YNL186W	YEL009C-A	A0A023PZF2	135 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms