RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	YHR125W	P38831	101 aa		2.62	□□□□□ -1.99
NIT3	YLR351C	AST2	P39945	430 aa	Known RBP	2.62	□□□□□ -1.99
NIT3	YLR351C	PRE6	P40303	254 aa	Known RBP	2.62	□□□□□ -1.99
NIT3	YLR351C	PRM8	P53174	237 aa		2.62	□□□□□ -1.99
NIT3	YLR351C	COG5	P53951	403 aa		2.62	□□□□□ -1.99
NIT3	YLR351C	YMR226C	Q05016	267 aa	Known RBP	2.62	□□□□□ -1.99
NIT3	YLR351C	YOR289W	Q12012	251 aa	Predicted RBP	2.62	□□□□□ -1.99
NIT3	YLR351C	YRA1	Q12159	226 aa	Known RBP	2.62	□□□□□ -1.99
NIT3	YLR351C	TIM9	O74700	87 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	RHO1	P06780	209 aa	Known RBP	2.61	□□□□□ -1.99
NIT3	YLR351C	ADH3	P07246	375 aa	Known RBP	2.61	□□□□□ -1.99
NIT3	YLR351C	YFR010W-A	P0C5N0	62 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	YOL162W	P0CF19	215 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	MATALPHA1	P0CY06	175 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	HMLALPHA1	P0CY07	175 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	GCN20	P43535	752 aa	Known RBP	2.61	□□□□□ -1.99
NIT3	YLR351C	SNX4	P47057	423 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	YGR026W	P53217	278 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	RNH1	Q04740	348 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	NIP7	Q08962	181 aa	Known RBP	2.61	□□□□□ -1.99
NIT3	YLR351C	YOR343C	Q12484	108 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	HTL1	Q9URQ5	78 aa		2.61	□□□□□ -1.99
NIT3	YLR351C	SEC16	P48415	2195 aa	Known RBP	2.61	□□□□□ -1.99
NIT3	YLR351C	HSP30	P25619	332 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	UBC8	P28263	218 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	OAC1	P32332	324 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	YBR285W	P38354	144 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	YHR180W	P38868	163 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	YFR054C	P43622	192 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	HAM1	P47119	197 aa	Known RBP	2.6	□□□□□ -1.99
NIT3	YLR351C	YMR099C	Q03161	297 aa	Known RBP	2.6	□□□□□ -1.99
NIT3	YLR351C	IRC19	Q07843	230 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	MHF1	Q3E835	90 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	Q0144	Q9ZZW2	109 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	FLO9	P39712	1322 aa		2.6	□□□□□ -1.99
NIT3	YLR351C	YHR032W-A	P0C5N6	59 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	RPL43A	P0CX25	92 aa	Known RBP	2.59	□□□□□ -1.99
NIT3	YLR351C	RPL43B	P0CX26	92 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	YPK2	P18961	677 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	MDH2	P22133	377 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	RAD51	P25454	400 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	YHL037C	P38733	133 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	IPT1	P38954	527 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	RFC4	P40339	323 aa	Known RBP	2.59	□□□□□ -1.99
NIT3	YLR351C	YRB2	P40517	327 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	MCM22	P47167	239 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	YNR062C	P53748	327 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	MIX14	Q04341	121 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	RAF1	Q06891	181 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	MSA1	Q08471	629 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	SPC3	Q12133	184 aa		2.59	□□□□□ -1.99
NIT3	YLR351C	PUT1	P09368	476 aa		2.58	□□□□□ -2
NIT3	YLR351C	DSF1	P0CX08	502 aa		2.58	□□□□□ -2
NIT3	YLR351C	YNR073C	P0CX09	502 aa		2.58	□□□□□ -2
NIT3	YLR351C	MSS2	P40990	351 aa		2.58	□□□□□ -2
NIT3	YLR351C	SMD3	P43321	101 aa	Known RBP	2.58	□□□□□ -2
NIT3	YLR351C	PET191	Q02772	108 aa		2.58	□□□□□ -2
NIT3	YLR351C	YMD8	Q03697	442 aa		2.58	□□□□□ -2
NIT3	YLR351C	ELP6	Q04868	273 aa		2.58	□□□□□ -2
NIT3	YLR351C	YMR315W	Q04869	349 aa	Known RBP	2.58	□□□□□ -2
NIT3	YLR351C	PST2	Q12335	198 aa	Known RBP	2.58	□□□□□ -2
NIT3	YLR351C	RPL24B	P24000	155 aa	Known RBP	2.57	□□□□□ -2
NIT3	YLR351C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
NIT3	YLR351C	ARC19	P33204	171 aa	Known RBP	2.57	□□□□□ -2
NIT3	YLR351C	NTF2	P33331	125 aa	Known RBP	2.57	□□□□□ -2
NIT3	YLR351C	RPS20	P38701	121 aa	Known RBP	2.57	□□□□□ -2
NIT3	YLR351C	CAT5	P41735	233 aa		2.57	□□□□□ -2
NIT3	YLR351C	DAN1	P47178	298 aa		2.57	□□□□□ -2
NIT3	YLR351C	CCC1	P47818	322 aa		2.57	□□□□□ -2
NIT3	YLR351C	PRM15	Q03262	622 aa		2.57	□□□□□ -2
NIT3	YLR351C	TLG1	Q03322	224 aa		2.57	□□□□□ -2
NIT3	YLR351C	DML1	Q03652	475 aa		2.57	□□□□□ -2
NIT3	YLR351C	AIM36	Q03798	255 aa		2.57	□□□□□ -2
NIT3	YLR351C	BNA7	Q04066	261 aa		2.57	□□□□□ -2
NIT3	YLR351C	UIP4	Q08926	304 aa		2.57	□□□□□ -2
NIT3	YLR351C	YOR020W-A	Q3E824	90 aa		2.57	□□□□□ -2
NIT3	YLR351C	YHR214C-E	Q8TGK0	99 aa		2.57	□□□□□ -2
NIT3	YLR351C	MED11	Q99278	115 aa		2.57	□□□□□ -2
NIT3	YLR351C	YPL229W	Q99395	206 aa		2.57	□□□□□ -2
NIT3	YLR351C	PRP8	P33334	2413 aa	Known RBP	2.57	□□□□□ -2
NIT3	YLR351C	MSW1	P04803	379 aa		2.56	□□□□□ -2
NIT3	YLR351C	VMA6	P32366	345 aa	Known RBP	2.56	□□□□□ -2
NIT3	YLR351C	VMA11	P32842	164 aa		2.56	□□□□□ -2
NIT3	YLR351C	CLG1	P35190	452 aa		2.56	□□□□□ -2
NIT3	YLR351C	ECM4	P36156	370 aa		2.56	□□□□□ -2
NIT3	YLR351C	RPF1	P38805	295 aa	Known RBP	2.56	□□□□□ -2
NIT3	YLR351C	EGD2	P38879	174 aa	Known RBP	2.56	□□□□□ -2
NIT3	YLR351C	COX15	P40086	486 aa		2.56	□□□□□ -2
NIT3	YLR351C	RIO2	P40160	425 aa	Known RBP	2.56	□□□□□ -2
NIT3	YLR351C	PDS1	P40316	373 aa	Predicted RBP	2.56	□□□□□ -2
NIT3	YLR351C	GVP36	P40531	326 aa	Known RBP	2.56	□□□□□ -2
NIT3	YLR351C	YJR056C	P47115	236 aa		2.56	□□□□□ -2
NIT3	YLR351C	YGL204C	P53089	101 aa		2.56	□□□□□ -2
NIT3	YLR351C	NQM1	P53228	333 aa	Predicted RBP	2.56	□□□□□ -2
NIT3	YLR351C	PGA1	P53896	198 aa		2.56	□□□□□ -2
NIT3	YLR351C	HHT1	P61830	136 aa		2.56	□□□□□ -2
NIT3	YLR351C	YDR391C	Q04170	232 aa		2.56	□□□□□ -2
NIT3	YLR351C	ATG39	Q06159	398 aa		2.56	□□□□□ -2
NIT3	YLR351C	YDL180W	Q12301	547 aa		2.56	□□□□□ -2
NIT3	YLR351C	COX9	P07255	59 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms