RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W REE1P40893 198 aa1.92□□□□□ -2.1
SDC25YLL016W SYS1P41544 203 aa1.92□□□□□ -2.1
SDC25YLL016W UFD1P53044 361 aa1.92□□□□□ -2.1
SDC25YLL016W NIP7Q08962 181 aaKnown RBP1.92□□□□□ -2.1
SDC25YLL016W ATG5Q12380 294 aa1.92□□□□□ -2.1
SDC25YLL016W DFM1Q12743 341 aaKnown RBP1.92□□□□□ -2.1
SDC25YLL016W YLR361C-AQ3E795 98 aa1.92□□□□□ -2.1
SDC25YLL016W YFR032C-BQ8TGU2 87 aa1.92□□□□□ -2.1
SDC25YLL016W CKS1P20486 150 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W PGU1P47180 361 aa1.91□□□□□ -2.1
SDC25YLL016W YDL211CQ12121 372 aa1.91□□□□□ -2.1
SDC25YLL016W YLR462WO13556 202 aa1.91□□□□□ -2.1
SDC25YLL016W ADH3P07246 375 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W YEL075CP39972 122 aa1.91□□□□□ -2.1
SDC25YLL016W HHT1P61830 136 aa1.91□□□□□ -2.1
SDC25YLL016W RPL2AP0CX45 254 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W RPL2BP0CX46 254 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W MNN5P46982 586 aa1.91□□□□□ -2.1
SDC25YLL016W ARP3P47117 449 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W YJR111CP47148 283 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W YGL101WP53144 215 aa1.91□□□□□ -2.1
SDC25YLL016W RSM27P53305 110 aa1.91□□□□□ -2.1
SDC25YLL016W YNL010WP53981 241 aaKnown RBP1.91□□□□□ -2.1
SDC25YLL016W YML122CQ03207 126 aa1.91□□□□□ -2.1
SDC25YLL016W TSC3Q3E790 80 aa1.91□□□□□ -2.1
SDC25YLL016W ISD11Q6Q560 94 aa1.91□□□□□ -2.1
SDC25YLL016W MRPS28P21771 286 aa1.9□□□□□ -2.11
SDC25YLL016W RCN1P36054 211 aa1.9□□□□□ -2.11
SDC25YLL016W VMA10P48836 114 aaKnown RBP1.9□□□□□ -2.11
SDC25YLL016W TVP15Q03860 143 aa1.9□□□□□ -2.11
SDC25YLL016W ATG39Q06159 398 aa1.9□□□□□ -2.11
SDC25YLL016W MPD1Q12404 318 aaKnown RBP1.9□□□□□ -2.11
SDC25YLL016W RIB3Q99258 208 aa1.9□□□□□ -2.11
SDC25YLL016W CNB1P25296 175 aa1.9□□□□□ -2.11
SDC25YLL016W SUA7P29055 345 aaPredicted RBP1.9□□□□□ -2.11
SDC25YLL016W OCH1P31755 480 aa1.9□□□□□ -2.11
SDC25YLL016W SFK1P35735 353 aa1.9□□□□□ -2.11
SDC25YLL016W RPF1P38805 295 aaKnown RBP1.9□□□□□ -2.11
SDC25YLL016W EMC4P53073 190 aa1.9□□□□□ -2.11
SDC25YLL016W OSH6Q02201 448 aa1.9□□□□□ -2.11
SDC25YLL016W ECM19Q06011 112 aa1.9□□□□□ -2.11
SDC25YLL016W YOR342CQ12182 319 aa1.9□□□□□ -2.11
SDC25YLL016W SMT3Q12306 101 aaKnown RBP1.9□□□□□ -2.11
SDC25YLL016W YBL112CQ3E7Y4 105 aa1.9□□□□□ -2.11
SDC25YLL016W YBR298C-AQ8TGK4 73 aa1.9□□□□□ -2.11
SDC25YLL016W PET9P18239 318 aaKnown RBP1.89□□□□□ -2.11
SDC25YLL016W YBR285WP38354 144 aa1.89□□□□□ -2.11
SDC25YLL016W KRE9P39005 276 aa1.89□□□□□ -2.11
SDC25YLL016W PHB1P40961 287 aa1.89□□□□□ -2.11
SDC25YLL016W LSM3P57743 89 aaKnown RBP1.89□□□□□ -2.11
SDC25YLL016W ACT1P60010 375 aaKnown RBP1.89□□□□□ -2.11
SDC25YLL016W DYN2Q02647 92 aa1.89□□□□□ -2.11
SDC25YLL016W YDR278CQ05612 105 aa1.89□□□□□ -2.11
SDC25YLL016W TRA1P38811 3744 aa1.89□□□□□ -2.11
SDC25YLL016W UBI4P0CG63 381 aaKnown RBP1.89□□□□□ -2.11
SDC25YLL016W BET1P22804 142 aa1.89□□□□□ -2.11
SDC25YLL016W POP4P38336 279 aa1.89□□□□□ -2.11
SDC25YLL016W YEA4P40004 342 aa1.89□□□□□ -2.11
SDC25YLL016W IRC22P40006 225 aa1.89□□□□□ -2.11
SDC25YLL016W BUD13P46947 266 aaPredicted RBP1.89□□□□□ -2.11
SDC25YLL016W SDT1P53078 280 aa1.89□□□□□ -2.11
SDC25YLL016W UBC7Q02159 165 aa1.89□□□□□ -2.11
SDC25YLL016W YDR249CQ03787 373 aa1.89□□□□□ -2.11
SDC25YLL016W PRR2Q12310 699 aa1.89□□□□□ -2.11
SDC25YLL016W PST2Q12335 198 aaKnown RBP1.89□□□□□ -2.11
SDC25YLL016W RPB9P27999 122 aa1.88□□□□□ -2.11
SDC25YLL016W PRS3P38689 320 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W APQ12P40532 138 aa1.88□□□□□ -2.11
SDC25YLL016W CCC1P47818 322 aa1.88□□□□□ -2.11
SDC25YLL016W RBL2P48606 106 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W SOL1P50278 321 aa1.88□□□□□ -2.11
SDC25YLL016W YPL247CQ12523 523 aa1.88□□□□□ -2.11
SDC25YLL016W SLO1Q3E784 85 aa1.88□□□□□ -2.11
SDC25YLL016W UTP30P36144 274 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W SWD3P38123 315 aa1.88□□□□□ -2.11
SDC25YLL016W TIM13P53299 105 aa1.88□□□□□ -2.11
SDC25YLL016W RCF2P53721 224 aa1.88□□□□□ -2.11
SDC25YLL016W PGA1P53896 198 aa1.88□□□□□ -2.11
SDC25YLL016W DID2P69771 204 aa1.88□□□□□ -2.11
SDC25YLL016W CSN9Q03981 162 aa1.88□□□□□ -2.11
SDC25YLL016W YOL014WQ08110 124 aa1.88□□□□□ -2.11
SDC25YLL016W YML100W-AQ8TGT0 57 aa1.88□□□□□ -2.11
SDC25YLL016W YLR156WP0CE96 114 aa1.88□□□□□ -2.11
SDC25YLL016W YLR159WP0CE97 114 aa1.88□□□□□ -2.11
SDC25YLL016W YLR161WP0CE98 114 aa1.88□□□□□ -2.11
SDC25YLL016W RPL30P14120 105 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W FMP46P36141 133 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W COS8P38723 381 aa1.88□□□□□ -2.11
SDC25YLL016W FCY21P40039 528 aa1.88□□□□□ -2.11
SDC25YLL016W RFC2P40348 353 aa1.88□□□□□ -2.11
SDC25YLL016W GPI14P47088 403 aaKnown RBP1.88□□□□□ -2.11
SDC25YLL016W MRPS16Q02608 121 aa1.88□□□□□ -2.11
SDC25YLL016W AKR2Q12013 749 aa1.88□□□□□ -2.11
SDC25YLL016W GEP5Q12393 293 aa1.88□□□□□ -2.11
SDC25YLL016W Q0255P03881 472 aa1.87□□□□□ -2.11
SDC25YLL016W CBP6P07253 162 aaPredicted RBP1.87□□□□□ -2.11
SDC25YLL016W URA5P13298 226 aaKnown RBP1.87□□□□□ -2.11
SDC25YLL016W CCA1P21269 546 aa1.87□□□□□ -2.11
SDC25YLL016W SPO13P23624 291 aa1.87□□□□□ -2.11
SDC25YLL016W PRE7P23724 241 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms