RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W MOB1P40484 314 aa3.28□□□□□ -1.88
SOF1YLL011W ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W RAV2Q03956 351 aa3.28□□□□□ -1.88
SOF1YLL011W YLR361C-AQ3E795 98 aa3.28□□□□□ -1.88
SOF1YLL011W CCH1P50077 2039 aa3.28□□□□□ -1.88
SOF1YLL011W ADH3P07246 375 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W RPL40AP0CH08 128 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W RPL40BP0CH09 128 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W PBI2P0CT04 75 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W RPB3P16370 318 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W MRPS28P21771 286 aa3.28□□□□□ -1.88
SOF1YLL011W BET1P22804 142 aa3.28□□□□□ -1.88
SOF1YLL011W SPO13P23624 291 aa3.28□□□□□ -1.88
SOF1YLL011W PFS2P42841 465 aaKnown RBP3.28□□□□□ -1.88
SOF1YLL011W MNN5P46982 586 aa3.28□□□□□ -1.88
SOF1YLL011W YJR015WP47090 510 aa3.28□□□□□ -1.88
SOF1YLL011W SMD1Q02260 146 aaPredicted RBP3.28□□□□□ -1.88
SOF1YLL011W RSM10Q03201 203 aa3.28□□□□□ -1.88
SOF1YLL011W TRM12Q04235 462 aa3.28□□□□□ -1.88
SOF1YLL011W MRX8Q05473 314 aa3.28□□□□□ -1.88
SOF1YLL011W MCP1Q12106 302 aa3.28□□□□□ -1.88
SOF1YLL011W RIB3Q99258 208 aa3.28□□□□□ -1.88
SOF1YLL011W MYO1P08964 1928 aa3.27□□□□□ -1.89
SOF1YLL011W RFC2P40348 353 aa3.27□□□□□ -1.89
SOF1YLL011W SKI6P46948 246 aaPredicted RBP3.27□□□□□ -1.89
SOF1YLL011W GPI14P47088 403 aaKnown RBP3.27□□□□□ -1.89
SOF1YLL011W SDT1P53078 280 aa3.27□□□□□ -1.89
SOF1YLL011W LSM3P57743 89 aaKnown RBP3.27□□□□□ -1.89
SOF1YLL011W SPC24Q04477 213 aa3.27□□□□□ -1.89
SOF1YLL011W MOT1P32333 1867 aa3.26□□□□□ -1.89
SOF1YLL011W ADH1P00330 348 aaKnown RBP3.26□□□□□ -1.89
SOF1YLL011W Q0255P03881 472 aa3.26□□□□□ -1.89
SOF1YLL011W RAD10P06838 210 aa3.26□□□□□ -1.89
SOF1YLL011W YHL026CP38740 315 aa3.26□□□□□ -1.89
SOF1YLL011W YEA4P40004 342 aa3.26□□□□□ -1.89
SOF1YLL011W CIN5P40917 295 aa3.26□□□□□ -1.89
SOF1YLL011W YGL088WP53151 121 aa3.26□□□□□ -1.89
SOF1YLL011W THI74Q04083 370 aa3.26□□□□□ -1.89
SOF1YLL011W YOR342CQ12182 319 aa3.26□□□□□ -1.89
SOF1YLL011W IES3Q12345 250 aa3.26□□□□□ -1.89
SOF1YLL011W TAD3Q9URQ3 322 aa3.26□□□□□ -1.89
SOF1YLL011W REP2P03872 296 aa3.25□□□□□ -1.89
SOF1YLL011W URA5P13298 226 aaKnown RBP3.25□□□□□ -1.89
SOF1YLL011W YBR285WP38354 144 aa3.25□□□□□ -1.89
SOF1YLL011W MED6P38782 295 aa3.25□□□□□ -1.89
SOF1YLL011W YHR125WP38831 101 aa3.25□□□□□ -1.89
SOF1YLL011W AIM2P39721 246 aa3.25□□□□□ -1.89
SOF1YLL011W AVT2P39981 480 aa3.25□□□□□ -1.89
SOF1YLL011W APQ12P40532 138 aa3.25□□□□□ -1.89
SOF1YLL011W MEP2P41948 499 aa3.25□□□□□ -1.89
SOF1YLL011W RBL2P48606 106 aaKnown RBP3.25□□□□□ -1.89
SOF1YLL011W ORM1P53224 222 aa3.25□□□□□ -1.89
SOF1YLL011W APJ1P53940 528 aa3.25□□□□□ -1.89
SOF1YLL011W HHT1P61830 136 aa3.25□□□□□ -1.89
SOF1YLL011W YOL014WQ08110 124 aa3.25□□□□□ -1.89
SOF1YLL011W DAS2Q12084 232 aa3.25□□□□□ -1.89
SOF1YLL011W DGK1Q12382 290 aa3.25□□□□□ -1.89
SOF1YLL011W PSF1Q12488 208 aa3.25□□□□□ -1.89
SOF1YLL011W IRA1P18963 3092 aa3.24□□□□□ -1.89
SOF1YLL011W CBP6P07253 162 aaPredicted RBP3.24□□□□□ -1.89
SOF1YLL011W NHP6AP11632 93 aaKnown RBP3.24□□□□□ -1.89
SOF1YLL011W TIF34P40217 347 aaKnown RBP3.24□□□□□ -1.89
SOF1YLL011W FCF1Q05498 189 aaPredicted RBP3.24□□□□□ -1.89
SOF1YLL011W YDL180WQ12301 547 aa3.24□□□□□ -1.89
SOF1YLL011W YML100W-AQ8TGT0 57 aa3.24□□□□□ -1.89
SOF1YLL011W PCL1P24867 279 aa3.23□□□□□ -1.89
SOF1YLL011W OCH1P31755 480 aa3.23□□□□□ -1.89
SOF1YLL011W SER2P42941 309 aa3.23□□□□□ -1.89
SOF1YLL011W OST2P46964 130 aa3.23□□□□□ -1.89
SOF1YLL011W TDA4P47153 279 aa3.23□□□□□ -1.89
SOF1YLL011W RCF2P53721 224 aa3.23□□□□□ -1.89
SOF1YLL011W DYN2Q02647 92 aa3.23□□□□□ -1.89
SOF1YLL011W CSN9Q03981 162 aa3.23□□□□□ -1.89
SOF1YLL011W FMP27Q06179 2628 aa3.23□□□□□ -1.89
SOF1YLL011W FKS1P38631 1876 aaKnown RBP3.23□□□□□ -1.89
SOF1YLL011W RPL9AP05738 191 aaKnown RBP3.22□□□□□ -1.89
SOF1YLL011W RPL30P14120 105 aaKnown RBP3.22□□□□□ -1.89
SOF1YLL011W CCA1P21269 546 aa3.22□□□□□ -1.89
SOF1YLL011W ATP15P21306 62 aa3.22□□□□□ -1.89
SOF1YLL011W OPY1P38271 328 aa3.22□□□□□ -1.89
SOF1YLL011W PRS3P38689 320 aaKnown RBP3.22□□□□□ -1.89
SOF1YLL011W ARC15P40518 154 aaRIP-Chip data3.22□□□□□ -1.89not detected
SOF1YLL011W PHB1P40961 287 aa3.22□□□□□ -1.89
SOF1YLL011W TTI2P47168 421 aa3.22□□□□□ -1.89
SOF1YLL011W VMA10P48836 114 aaKnown RBP3.22□□□□□ -1.89
SOF1YLL011W RPL9BP51401 191 aaKnown RBP3.22□□□□□ -1.89
SOF1YLL011W YMR320WQ04897 101 aa3.22□□□□□ -1.89
SOF1YLL011W NKP2Q06162 153 aa3.22□□□□□ -1.89
SOF1YLL011W RAD50P12753 1312 aa3.22□□□□□ -1.89
SOF1YLL011W RIF1P29539 1916 aa3.22□□□□□ -1.89
SOF1YLL011W CDC8P00572 216 aa3.22□□□□□ -1.89
SOF1YLL011W YHR032W-AP0C5N6 59 aa3.22□□□□□ -1.89
SOF1YLL011W STP22P25604 385 aa3.22□□□□□ -1.89
SOF1YLL011W SUA7P29055 345 aaPredicted RBP3.22□□□□□ -1.89
SOF1YLL011W NSG1P38837 291 aa3.22□□□□□ -1.89
SOF1YLL011W FCY21P40039 528 aa3.22□□□□□ -1.89
SOF1YLL011W GON7P46984 123 aa3.22□□□□□ -1.89
SOF1YLL011W UBC7Q02159 165 aa3.22□□□□□ -1.89
SOF1YLL011W YML122CQ03207 126 aa3.22□□□□□ -1.89
SOF1YLL011W PST2Q12335 198 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 196 ms