RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	SFT1	P43682	97 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	TDA4	P47153	279 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	FCF2	Q12035	217 aa	Predicted RBP	2.83	□□□□□ -1.96
TMA108	YIL137C	YIR021W-A	Q3E739	70 aa		2.83	□□□□□ -1.96
TMA108	YIL137C	SIR2	P06700	562 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	MAG1	P22134	296 aa	Known RBP	2.82	□□□□□ -1.96
TMA108	YIL137C	ATG22	P25568	528 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	MED6	P38782	295 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	YGR017W	P53210	297 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	NRM1	P53718	249 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	PIR3	Q03180	325 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	ATG39	Q06159	398 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	YPS3	Q12303	508 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	ATG5	Q12380	294 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	DGK1	Q12382	290 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	FMP49	A0A023PZB3	126 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	RPL25	P04456	142 aa	Known RBP	2.82	□□□□□ -1.96
TMA108	YIL137C	YER039C-A	P0CD97	72 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	CSE2	P33308	149 aa		2.82	□□□□□ -1.96
TMA108	YIL137C	RPS8A	P0CX39	200 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	RPS8B	P0CX40	200 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	ZRT3	P34240	503 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	RPR2	P40571	144 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	YJL218W	P40892	196 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	OST2	P46964	130 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	YAE1	P47118	141 aa	Predicted RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	YDR366C	P87287	132 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	NIP7	Q08962	181 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	YLR118C	Q12354	227 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	OCA6	Q12454	224 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	PIS1	P06197	220 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	PBI2	P0CT04	75 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	CKS1	P20486	150 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	RPF1	P38805	295 aa	Known RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	COX14	P39103	70 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	BUD13	P46947	266 aa	Predicted RBP	2.81	□□□□□ -1.96
TMA108	YIL137C	YGR015C	P53208	328 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	YPR011C	Q12251	326 aa		2.81	□□□□□ -1.96
TMA108	YIL137C	RPL42A	P0CX27	106 aa	Known RBP	2.8	□□□□□ -1.96
TMA108	YIL137C	RPL42B	P0CX28	106 aa	Known RBP	2.8	□□□□□ -1.96
TMA108	YIL137C	SFC1	P33303	322 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	RCN1	P36054	211 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	MRPL39	P36533	70 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	GGC1	P38988	300 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	AYR1	P40471	297 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	APJ1	P53940	528 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	VPS28	Q02767	242 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	LPP1	Q04396	274 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
TMA108	YIL137C	MCP1	Q12106	302 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	AYT1	Q12226	474 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	TSC3	Q3E790	80 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	COQ2	P32378	372 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	YHR140W	P38842	239 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	AIM2	P39721	246 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	YGR039W	P53225	103 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	YOR376W-A	Q3E805	51 aa		2.8	□□□□□ -1.96
TMA108	YIL137C	ATP15	P21306	62 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	TOM40	P23644	387 aa	Known RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	SNC2	P33328	115 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	TOD6	P34219	525 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	SMP1	P38128	452 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	PHO89	P38361	574 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	LSM12	P38828	187 aa	Known RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	MTC6	P38849	526 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	RIO2	P40160	425 aa	Known RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	YJL213W	P40896	331 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	YFL019C	P43576	117 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	ATG18	P43601	500 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	YGR018C	P53211	109 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	YNR062C	P53748	327 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	YMR254C	Q04838	102 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	FMP42	Q04991	504 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	RNH202	Q05635	350 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	REP2	P03872	296 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	RPB3	P16370	318 aa	Known RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	YER188W	P40103	239 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	YDR102C	Q03864	110 aa		2.79	□□□□□ -1.96
TMA108	YIL137C	RRG7	Q08774	242 aa	Predicted RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	HTZ1	Q12692	134 aa	Known RBP	2.79	□□□□□ -1.96
TMA108	YIL137C	ATR1	P13090	542 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	RPB5	P20434	215 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	YNK1	P36010	153 aa	Known RBP	2.78	□□□□□ -1.96
TMA108	YIL137C	YPT31	P38555	223 aa	Known RBP	2.78	□□□□□ -1.96
TMA108	YIL137C	CHS7	P38843	316 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	CTR2	P38865	189 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	MOB1	P40484	314 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	CFD1	P40558	293 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	ECM19	Q06011	112 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	EAF3	Q12432	401 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	YET1	P35723	206 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	OMA1	P36163	345 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	VTC1	P40046	129 aa	RIP-Chip data	2.78	□□□□□ -1.96	not detected
TMA108	YIL137C	YER189W	P40104	122 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	PGU1	P47180	361 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	MDM34	P53083	459 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	YNL033W	P53964	284 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	YNL019C	P53975	284 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	YPL039W	Q03080	316 aa		2.78	□□□□□ -1.96
TMA108	YIL137C	RSM10	Q03201	203 aa		2.78	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms