RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YOR105WQ08504 108 aa6.96□□□□□ -1.3
UFD1YGR048W YPR203WQ08994 102 aa6.96□□□□□ -1.3
UFD1YGR048W NPC2Q12408 173 aa6.96□□□□□ -1.3
UFD1YGR048W UBA3Q99344 299 aa6.96□□□□□ -1.3
UFD1YGR048W RPS22AP0C0W1 130 aaKnown RBP6.95□□□□□ -1.3
UFD1YGR048W HOG1P32485 435 aa6.95□□□□□ -1.3
UFD1YGR048W DSS4P32601 143 aa6.95□□□□□ -1.3
UFD1YGR048W YNL195CP40168 261 aa6.95□□□□□ -1.3
UFD1YGR048W SBH2P52871 88 aa6.95□□□□□ -1.3
UFD1YGR048W YMR321CQ04898 105 aa6.95□□□□□ -1.3
UFD1YGR048W NAT3Q06504 195 aa6.95□□□□□ -1.3
UFD1YGR048W YDL211CQ12121 372 aa6.95□□□□□ -1.3
UFD1YGR048W VAR1P02381 398 aa6.94□□□□□ -1.3
UFD1YGR048W RPL7AP05737 244 aaKnown RBP6.94□□□□□ -1.3
UFD1YGR048W RPS21AP0C0V8 87 aaKnown RBP6.94□□□□□ -1.3
UFD1YGR048W NPR1P22211 790 aa6.94□□□□□ -1.3
UFD1YGR048W YFL054CP43549 646 aa6.94□□□□□ -1.3
UFD1YGR048W BNA2P47125 453 aa6.94□□□□□ -1.3
UFD1YGR048W NCE103P53615 221 aa6.94□□□□□ -1.3
UFD1YGR048W YNR064CP53750 290 aa6.94□□□□□ -1.3
UFD1YGR048W YLR152CP54072 576 aa6.94□□□□□ -1.3
UFD1YGR048W YMR090WQ04304 227 aaKnown RBP6.94□□□□□ -1.3
UFD1YGR048W YLR012CQ07927 99 aa6.94□□□□□ -1.3
UFD1YGR048W FCY2P17064 533 aa6.93□□□□□ -1.3
UFD1YGR048W ARO4P32449 370 aaKnown RBP6.93□□□□□ -1.3
UFD1YGR048W YOR062CP36025 268 aa6.93□□□□□ -1.3
UFD1YGR048W YKL071WP36086 256 aa6.93□□□□□ -1.3
UFD1YGR048W SWD2P36104 329 aaPredicted RBP6.93□□□□□ -1.3
UFD1YGR048W ATX1P38636 73 aa6.93□□□□□ -1.3
UFD1YGR048W YER121WP40076 114 aa6.93□□□□□ -1.3
UFD1YGR048W YCH1P42937 148 aa6.93□□□□□ -1.3
UFD1YGR048W SCS22Q6Q595 175 aa6.93□□□□□ -1.3
UFD1YGR048W ATG40Q99325 256 aa6.93□□□□□ -1.3
UFD1YGR048W MRS1P07266 363 aa6.92□□□□□ -1.3
UFD1YGR048W YKR104WP0CE69 306 aa6.92□□□□□ -1.3
UFD1YGR048W CBS1P14066 229 aa6.92□□□□□ -1.3
UFD1YGR048W YKR073CP36153 106 aa6.92□□□□□ -1.3
UFD1YGR048W YJL213WP40896 331 aa6.92□□□□□ -1.3
UFD1YGR048W MSO1P53604 210 aaKnown RBP6.92□□□□□ -1.3
UFD1YGR048W RPS21BQ3E754 87 aaKnown RBP6.92□□□□□ -1.3
UFD1YGR048W RPL12AP0CX53 165 aaKnown RBP6.91□□□□□ -1.3
UFD1YGR048W RPL12BP0CX54 165 aa6.91□□□□□ -1.3
UFD1YGR048W POX1P13711 748 aa6.91□□□□□ -1.3
UFD1YGR048W PCL1P24867 279 aa6.91□□□□□ -1.3
UFD1YGR048W PRE2P30656 287 aaKnown RBP6.91□□□□□ -1.3
UFD1YGR048W YBR184WP38299 523 aa6.91□□□□□ -1.3
UFD1YGR048W ECM34P38728 170 aa6.91□□□□□ -1.3
UFD1YGR048W PCL5P38794 229 aa6.91□□□□□ -1.3
UFD1YGR048W ECM14P38836 430 aa6.91□□□□□ -1.3
UFD1YGR048W GGC1P38988 300 aa6.91□□□□□ -1.3
UFD1YGR048W PIR3Q03180 325 aa6.91□□□□□ -1.3
UFD1YGR048W ECM18Q04623 453 aa6.91□□□□□ -1.3
UFD1YGR048W DPP1Q05521 289 aa6.91□□□□□ -1.3
UFD1YGR048W LDS2Q08218 356 aa6.91□□□□□ -1.3
UFD1YGR048W SMT3Q12306 101 aaKnown RBP6.91□□□□□ -1.3
UFD1YGR048W UTP23Q12339 254 aaKnown RBP6.91□□□□□ -1.3
UFD1YGR048W GAL7P08431 366 aa6.9□□□□□ -1.3
UFD1YGR048W CDC43P18898 376 aa6.9□□□□□ -1.3
UFD1YGR048W IMG2P25642 146 aaPredicted RBP6.9□□□□□ -1.3
UFD1YGR048W DER1P38307 211 aa6.9□□□□□ -1.3
UFD1YGR048W TIM17P39515 158 aa6.9□□□□□ -1.3
UFD1YGR048W NIT1P40447 199 aa6.9□□□□□ -1.3
UFD1YGR048W LPP1Q04396 274 aa6.9□□□□□ -1.3
UFD1YGR048W SWT1Q12104 458 aa6.9□□□□□ -1.3
UFD1YGR048W SOD1P00445 154 aaKnown RBP6.89□□□□□ -1.31
UFD1YGR048W QCR9P22289 66 aa6.89□□□□□ -1.31
UFD1YGR048W RFA3P26755 122 aaKnown RBP6.89□□□□□ -1.31
UFD1YGR048W SRP21P32342 167 aa6.89□□□□□ -1.31
UFD1YGR048W TOA2P32774 122 aa6.89□□□□□ -1.31
UFD1YGR048W SHB17P36136 271 aaKnown RBP6.89□□□□□ -1.31
UFD1YGR048W IML3P38265 245 aa6.89□□□□□ -1.31
UFD1YGR048W RPP1P38786 293 aa6.89□□□□□ -1.31
UFD1YGR048W ELO1P39540 310 aa6.89□□□□□ -1.31
UFD1YGR048W YAL037WP39728 267 aa6.89□□□□□ -1.31
UFD1YGR048W OXA1P39952 402 aa6.89□□□□□ -1.31
UFD1YGR048W APQ12P40532 138 aa6.89□□□□□ -1.31
UFD1YGR048W OST2P46964 130 aa6.89□□□□□ -1.31
UFD1YGR048W BNA1P47096 177 aa6.89□□□□□ -1.31
UFD1YGR048W YGL118CP53132 145 aa6.89□□□□□ -1.31
UFD1YGR048W CDH1P53197 566 aa6.89□□□□□ -1.31
UFD1YGR048W YLR460CP54007 376 aa6.89□□□□□ -1.31
UFD1YGR048W BET5Q03630 159 aa6.89□□□□□ -1.31
UFD1YGR048W YLR296WQ05898 108 aa6.89□□□□□ -1.31
UFD1YGR048W LIP2Q06005 328 aa6.89□□□□□ -1.31
UFD1YGR048W YTH1Q06102 208 aaPredicted RBP6.89□□□□□ -1.31
UFD1YGR048W GRE1Q08969 168 aa6.89□□□□□ -1.31
UFD1YGR048W PRP46Q12417 451 aaPredicted RBP6.89□□□□□ -1.31
UFD1YGR048W MSB2P32334 1306 aa6.89□□□□□ -1.31
UFD1YGR048W KKQ8P36004 724 aa6.88□□□□□ -1.31
UFD1YGR048W MOH1P38191 138 aa6.88□□□□□ -1.31
UFD1YGR048W TRM7P38238 310 aaKnown RBP6.88□□□□□ -1.31
UFD1YGR048W ANS1P38832 159 aa6.88□□□□□ -1.31
UFD1YGR048W SRP14P38985 146 aa6.88□□□□□ -1.31
UFD1YGR048W YAR068WP39564 161 aa6.88□□□□□ -1.31
UFD1YGR048W OSW5P40219 148 aa6.88□□□□□ -1.31
UFD1YGR048W CYB5P40312 120 aa6.88□□□□□ -1.31
UFD1YGR048W CRH1P53301 507 aa6.88□□□□□ -1.31
UFD1YGR048W OGG1P53397 376 aaPredicted RBP6.88□□□□□ -1.31
UFD1YGR048W VPS71Q03433 280 aa6.88□□□□□ -1.31
UFD1YGR048W MRPL51Q06090 140 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms