RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W RNH203Q12338 110 aa5.04□□□□□ -1.6
RPN11YFR004W SEC59P20048 519 aa5.03□□□□□ -1.6
RPN11YFR004W AHT1P29589 182 aa5.03□□□□□ -1.6
RPN11YFR004W CUE1P38428 203 aa5.03□□□□□ -1.6
RPN11YFR004W RTC3P38804 111 aaPredicted RBP5.03□□□□□ -1.6
RPN11YFR004W YER084WP40057 128 aa5.03□□□□□ -1.6
RPN11YFR004W PIG2P40187 538 aa5.03□□□□□ -1.6
RPN11YFR004W PDR17P53844 350 aa5.03□□□□□ -1.6
RPN11YFR004W YDR114CQ04597 100 aa5.03□□□□□ -1.6
RPN11YFR004W RRS1Q08746 203 aaKnown RBP5.03□□□□□ -1.6
RPN11YFR004W FIT3Q08907 204 aa5.03□□□□□ -1.6
RPN11YFR004W RPL15AP05748 204 aaKnown RBP5.02□□□□□ -1.61
RPN11YFR004W PAU1P0CE88 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU14P0CE89 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU6P0CE90 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU18P0CE91 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU8P0CE92 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU11P0CE93 120 aa5.02□□□□□ -1.61
RPN11YFR004W URA5P13298 226 aaKnown RBP5.02□□□□□ -1.61
RPN11YFR004W SSS1P35179 80 aa5.02□□□□□ -1.61
RPN11YFR004W MRPS9P38120 278 aa5.02□□□□□ -1.61
RPN11YFR004W PAU13P38725 120 aa5.02□□□□□ -1.61
RPN11YFR004W RMD6P39975 231 aa5.02□□□□□ -1.61
RPN11YFR004W PAU15P40585 124 aa5.02□□□□□ -1.61
RPN11YFR004W YGL114WP53134 725 aa5.02□□□□□ -1.61
RPN11YFR004W PAU4P53427 120 aa5.02□□□□□ -1.61
RPN11YFR004W WSC2P53832 503 aa5.02□□□□□ -1.61
RPN11YFR004W RPL15BP54780 204 aaPredicted RBP5.02□□□□□ -1.61
RPN11YFR004W ARL3Q02804 198 aa5.02□□□□□ -1.61
RPN11YFR004W PAU10Q03050 120 aa5.02□□□□□ -1.61
RPN11YFR004W YDR391CQ04170 232 aa5.02□□□□□ -1.61
RPN11YFR004W UPS1Q05776 175 aa5.02□□□□□ -1.61
RPN11YFR004W PAU20Q08322 120 aa5.02□□□□□ -1.61
RPN11YFR004W PAU9Q3E770 120 aa5.02□□□□□ -1.61
RPN11YFR004W CCW14O13547 238 aa5.01□□□□□ -1.61
RPN11YFR004W CDC7P06243 507 aa5.01□□□□□ -1.61
RPN11YFR004W RPL35AP0CX84 120 aaKnown RBP5.01□□□□□ -1.61
RPN11YFR004W RPL35BP0CX85 120 aaKnown RBP5.01□□□□□ -1.61
RPN11YFR004W FCY2P17064 533 aa5.01□□□□□ -1.61
RPN11YFR004W ALK2P32789 676 aaPredicted RBP5.01□□□□□ -1.61
RPN11YFR004W PHS1P40857 217 aa5.01□□□□□ -1.61
RPN11YFR004W EGT2P42835 1041 aa5.01□□□□□ -1.61
RPN11YFR004W SMD3P43321 101 aaKnown RBP5.01□□□□□ -1.61
RPN11YFR004W TTI2P47168 421 aa5.01□□□□□ -1.61
RPN11YFR004W MGA1P53050 456 aa5.01□□□□□ -1.61
RPN11YFR004W HSK3P69852 69 aa5.01□□□□□ -1.61
RPN11YFR004W YDC1Q02896 317 aa5.01□□□□□ -1.61
RPN11YFR004W ECM18Q04623 453 aa5.01□□□□□ -1.61
RPN11YFR004W SEN15Q04675 128 aa5.01□□□□□ -1.61
RPN11YFR004W CTR3Q06686 241 aa5.01□□□□□ -1.61
RPN11YFR004W YLR118CQ12354 227 aa5.01□□□□□ -1.61
RPN11YFR004W LSB5P25369 354 aa5□□□□□ -1.61
RPN11YFR004W SHB17P36136 271 aaKnown RBP5□□□□□ -1.61
RPN11YFR004W YBR220CP38318 560 aa5□□□□□ -1.61
RPN11YFR004W WSS1P38838 269 aa5□□□□□ -1.61
RPN11YFR004W YGR269WP40326 108 aa5□□□□□ -1.61
RPN11YFR004W GLO1P50107 326 aa5□□□□□ -1.61
RPN11YFR004W YGL185CP53100 379 aa5□□□□□ -1.61
RPN11YFR004W YMR007WQ03675 126 aa5□□□□□ -1.61
RPN11YFR004W YLR179CQ06252 201 aaKnown RBP5□□□□□ -1.61
RPN11YFR004W POC4Q12245 148 aaPredicted RBP5□□□□□ -1.61
RPN11YFR004W ERG27Q12452 347 aaKnown RBP5□□□□□ -1.61
RPN11YFR004W RAX2Q12465 1220 aa5□□□□□ -1.61
RPN11YFR004W YDR157WA0A023PZE8 133 aa4.99□□□□□ -1.61
RPN11YFR004W RPS25BP0C0T4 108 aaKnown RBP4.99□□□□□ -1.61
RPN11YFR004W QDR3P38227 689 aa4.99□□□□□ -1.61
RPN11YFR004W TRS20P38334 175 aa4.99□□□□□ -1.61
RPN11YFR004W YPT31P38555 223 aaKnown RBP4.99□□□□□ -1.61
RPN11YFR004W PRM5P40476 318 aa4.99□□□□□ -1.61
RPN11YFR004W HIT1P46973 164 aa4.99□□□□□ -1.61
RPN11YFR004W LSM8P47093 109 aaKnown RBP4.99□□□□□ -1.61
RPN11YFR004W ARP3P47117 449 aaKnown RBP4.99□□□□□ -1.61
RPN11YFR004W SIP18P50263 79 aa4.99□□□□□ -1.61
RPN11YFR004W UBC13P52490 153 aa4.99□□□□□ -1.61
RPN11YFR004W UBC11P52492 156 aa4.99□□□□□ -1.61
RPN11YFR004W YGR050CP53231 118 aa4.99□□□□□ -1.61
RPN11YFR004W HCH1P53834 153 aa4.99□□□□□ -1.61
RPN11YFR004W FRQ1Q06389 190 aa4.99□□□□□ -1.61
RPN11YFR004W PRP11Q07350 266 aaPredicted RBP4.99□□□□□ -1.61
RPN11YFR004W RFM1Q12192 310 aa4.99□□□□□ -1.61
RPN11YFR004W ERV2Q12284 196 aa4.99□□□□□ -1.61
RPN11YFR004W LSO2Q3E772 92 aaKnown RBP4.99□□□□□ -1.61
RPN11YFR004W RPS25AQ3E792 108 aaPredicted RBP4.99□□□□□ -1.61
RPN11YFR004W BGL2P15703 313 aaKnown RBP4.98□□□□□ -1.61
RPN11YFR004W ROX3P25046 220 aa4.98□□□□□ -1.61
RPN11YFR004W COQ3P27680 312 aa4.98□□□□□ -1.61
RPN11YFR004W RPB9P27999 122 aa4.98□□□□□ -1.61
RPN11YFR004W YBL059WP34224 193 aa4.98□□□□□ -1.61
RPN11YFR004W MRPL28P36527 147 aa4.98□□□□□ -1.61
RPN11YFR004W COX15P40086 486 aa4.98□□□□□ -1.61
RPN11YFR004W DFG10P40526 253 aa4.98□□□□□ -1.61
RPN11YFR004W GON7P46984 123 aa4.98□□□□□ -1.61
RPN11YFR004W YIP5P53108 310 aa4.98□□□□□ -1.61
RPN11YFR004W YPL067CQ02754 198 aa4.98□□□□□ -1.61
RPN11YFR004W AVO2Q04749 426 aa4.98□□□□□ -1.61
RPN11YFR004W HRD1Q08109 551 aa4.98□□□□□ -1.61
RPN11YFR004W YOR352WQ08816 343 aa4.98□□□□□ -1.61
RPN11YFR004W BOL1Q3E793 110 aa4.98□□□□□ -1.61
RPN11YFR004W TRP4P07285 380 aaPredicted RBP4.97□□□□□ -1.61
RPN11YFR004W PET494P07390 489 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms