RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B YOR342CQ12182 319 aa0.77□□□□□ -2.29
YFL002W-BYFL002W-B DGK1Q12382 290 aa0.77□□□□□ -2.29
YFL002W-BYFL002W-B MPD1Q12404 318 aaKnown RBP0.77□□□□□ -2.29
YFL002W-BYFL002W-B GCY1P14065 312 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
YFL002W-BYFL002W-B ATP7P30902 174 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B CAF4P36130 643 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B ECM4P36156 370 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B NSG1P38837 291 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B YNL200CP40165 246 aaKnown RBP0.76□□□□□ -2.29
YFL002W-BYFL002W-B GPI14P47088 403 aaKnown RBP0.76□□□□□ -2.29
YFL002W-BYFL002W-B GIM3P53900 129 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B AIM36Q03798 255 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B UPS3Q04006 179 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B GPI17Q04080 534 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B DAS2Q12084 232 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B ATP20Q12233 115 aa0.76□□□□□ -2.29
YFL002W-BYFL002W-B RPS24AP0CX31 135 aaKnown RBP0.75□□□□□ -2.29
YFL002W-BYFL002W-B RPS24BP0CX32 135 aaKnown RBP0.75□□□□□ -2.29
YFL002W-BYFL002W-B SEN2P16658 377 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B YKL102CP34249 101 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B SFK1P35735 353 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B NVJ1P38881 321 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B CUP9P41817 306 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B HOP2P53187 214 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B MET31Q03081 177 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B AIM34Q03673 198 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B HPT1Q04178 221 aaKnown RBP0.75□□□□□ -2.29
YFL002W-BYFL002W-B ATG38Q05789 226 aaKnown RBP0.75□□□□□ -2.29
YFL002W-BYFL002W-B YET3Q07451 203 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B YOR381W-AQ3E804 55 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B YPR014CQ6B0W2 109 aa0.75□□□□□ -2.29
YFL002W-BYFL002W-B YCR023CP25351 611 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B TRX3P25372 127 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B GSP2P32836 220 aaKnown RBP0.74□□□□□ -2.29
YFL002W-BYFL002W-B RRT1P38192 103 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B FYV4P38783 130 aaPredicted RBP0.74□□□□□ -2.29
YFL002W-BYFL002W-B EGD2P38879 174 aaKnown RBP0.74□□□□□ -2.29
YFL002W-BYFL002W-B NSA2P40078 261 aaKnown RBP0.74□□□□□ -2.29
YFL002W-BYFL002W-B MPM1P40364 252 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B POG1P40473 351 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B ALB1P47019 175 aaPredicted RBP0.74□□□□□ -2.29
YFL002W-BYFL002W-B GAL83Q04739 417 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B SHH4Q06236 168 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B CHD1P32657 1468 aa0.74□□□□□ -2.29
YFL002W-BYFL002W-B RPL35AP0CX84 120 aaKnown RBP0.73□□□□□ -2.29
YFL002W-BYFL002W-B RPL35BP0CX85 120 aaKnown RBP0.73□□□□□ -2.29
YFL002W-BYFL002W-B RAD51P25454 400 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B RFC2P40348 353 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B TTI2P47168 421 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B SOL1P50278 321 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B YIP3P53633 176 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B BRX1Q08235 291 aaKnown RBP0.73□□□□□ -2.29
YFL002W-BYFL002W-B GRE1Q08969 168 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B YLR050CQ12155 161 aaKnown RBP0.73□□□□□ -2.29
YFL002W-BYFL002W-B YOR015WQ12169 119 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B TAR1Q8TGM6 124 aa0.73□□□□□ -2.29
YFL002W-BYFL002W-B MAK31P23059 88 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B SEC14P24280 304 aaKnown RBP0.72□□□□□ -2.29
YFL002W-BYFL002W-B UBC8P28263 218 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B TRR1P29509 319 aaKnown RBP0.72□□□□□ -2.29
YFL002W-BYFL002W-B CPR5P35176 225 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B YBR242WP38331 238 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B SEC72P39742 193 aaKnown RBP0.72□□□□□ -2.29
YFL002W-BYFL002W-B NSE4P43124 402 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B YNL140CP53910 189 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B DML1Q03652 475 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B RRP17Q04031 235 aaPredicted RBP0.72□□□□□ -2.29
YFL002W-BYFL002W-B YHP1Q04116 353 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B YDR391CQ04170 232 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B UPS1Q05776 175 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B YPR127WQ06494 345 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B YPR203WQ08994 102 aa0.72□□□□□ -2.29
YFL002W-BYFL002W-B STP22P25604 385 aa0.71□□□□□ -2.3
YFL002W-BYFL002W-B YRA2P36036 203 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
YFL002W-BYFL002W-B ETR1P38071 380 aa0.71□□□□□ -2.3
YFL002W-BYFL002W-B PAC10P48363 199 aa0.71□□□□□ -2.3
YFL002W-BYFL002W-B SBH1P52870 82 aa0.71□□□□□ -2.3
YFL002W-BYFL002W-B HSK3P69852 69 aa0.71□□□□□ -2.3
YFL002W-BYFL002W-B STF2P16965 84 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B YBL010CP32788 280 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B NUF2P33895 451 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B MRPL15P36523 253 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B XPT1P47165 209 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B YGL235WP53071 178 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B GIM5Q04493 163 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B ELP6Q04868 273 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B LCL2Q08045 131 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B ATG41Q12048 136 aa0.7□□□□□ -2.3
YFL002W-BYFL002W-B HSP30P25619 332 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B CSH1P38287 376 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B SRP14P38985 146 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B CCS1P40202 249 aaKnown RBP0.69□□□□□ -2.3
YFL002W-BYFL002W-B YFL051CP43552 160 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B YKR005CQ02203 525 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B PIR1Q03178 341 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B RIM9Q04734 239 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B YOR214CQ12282 236 aa0.69□□□□□ -2.3
YFL002W-BYFL002W-B YHL037CP38733 133 aa0.68□□□□□ -2.3
YFL002W-BYFL002W-B YEL073CP39974 107 aa0.68□□□□□ -2.3
YFL002W-BYFL002W-B YER121WP40076 114 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 111.7 ms