RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W CSM4Q08955 156 aa0.47□□□□□ -2.33
YCK3YER123W MED4Q12343 284 aa0.47□□□□□ -2.33
YCK3YER123W MRPS28P21771 286 aa0.46□□□□□ -2.34
YCK3YER123W YCR099CP25657 155 aa0.46□□□□□ -2.34
YCK3YER123W SKG1P36169 355 aa0.46□□□□□ -2.34
YCK3YER123W AIM18P38884 321 aa0.46□□□□□ -2.34
YCK3YER123W RPL33BP41056 107 aaKnown RBP0.46□□□□□ -2.34
YCK3YER123W YJR149WP47177 404 aa0.46□□□□□ -2.34
YCK3YER123W GEP7P53171 287 aa0.46□□□□□ -2.34
YCK3YER123W SAY1P53324 424 aa0.46□□□□□ -2.34
YCK3YER123W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
YCK3YER123W KRE28Q04431 385 aa0.46□□□□□ -2.34
YCK3YER123W SML1Q04964 104 aa0.46□□□□□ -2.34
YCK3YER123W MSH5Q12175 901 aa0.46□□□□□ -2.34
YCK3YER123W YLR126CQ12288 251 aa0.46□□□□□ -2.34
YCK3YER123W CDC8P00572 216 aa0.45□□□□□ -2.34
YCK3YER123W YPR170W-BP0C5R9 85 aa0.45□□□□□ -2.34
YCK3YER123W DDI2P0CH63 225 aa0.45□□□□□ -2.34
YCK3YER123W DDI3P0CH64 225 aa0.45□□□□□ -2.34
YCK3YER123W MATALPHA2P0CY08 210 aa0.45□□□□□ -2.34
YCK3YER123W HMLALPHA2P0CY09 210 aa0.45□□□□□ -2.34
YCK3YER123W KSS1P14681 368 aa0.45□□□□□ -2.34
YCK3YER123W SEN2P16658 377 aa0.45□□□□□ -2.34
YCK3YER123W MRPL25P23369 157 aa0.45□□□□□ -2.34
YCK3YER123W RPF1P38805 295 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W YNL200CP40165 246 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W PGD1P40356 397 aa0.45□□□□□ -2.34
YCK3YER123W TIR3P40552 269 aa0.45□□□□□ -2.34
YCK3YER123W GET1P53192 235 aa0.45□□□□□ -2.34
YCK3YER123W SNZ1Q03148 297 aa0.45□□□□□ -2.34
YCK3YER123W YLR173WQ06247 608 aa0.45□□□□□ -2.34
YCK3YER123W ARR2Q06597 130 aa0.45□□□□□ -2.34
YCK3YER123W NIP7Q08962 181 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W YPL162CQ12042 273 aa0.45□□□□□ -2.34
YCK3YER123W LSO2Q3E772 92 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W CDC33P07260 213 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W QCR8P08525 94 aa0.45□□□□□ -2.34
YCK3YER123W RPL2AP0CX45 254 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W RPL2BP0CX46 254 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W GPA2P10823 449 aa0.45□□□□□ -2.34
YCK3YER123W TRX3P25372 127 aa0.45□□□□□ -2.34
YCK3YER123W ATG22P25568 528 aa0.45□□□□□ -2.34
YCK3YER123W YCR016WP25617 290 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W SSO1P32867 290 aa0.45□□□□□ -2.34
YCK3YER123W MSN4P33749 630 aa0.45□□□□□ -2.34
YCK3YER123W YET1P35723 206 aa0.45□□□□□ -2.34
YCK3YER123W SVP26P38869 228 aa0.45□□□□□ -2.34
YCK3YER123W YNL217WP40152 326 aa0.45□□□□□ -2.34
YCK3YER123W RPL13BP40212 199 aaKnown RBP0.45□□□□□ -2.34
YCK3YER123W AIF1P52923 378 aa0.45□□□□□ -2.34
YCK3YER123W TOS8P53147 276 aa0.45□□□□□ -2.34
YCK3YER123W HOR7Q05827 59 aa0.45□□□□□ -2.34
YCK3YER123W NKP2Q06162 153 aa0.45□□□□□ -2.34
YCK3YER123W RPL13AQ12690 199 aaPredicted RBP0.45□□□□□ -2.34
YCK3YER123W MHF1Q3E835 90 aa0.45□□□□□ -2.34
YCK3YER123W GRX2P17695 143 aaKnown RBP0.44□□□□□ -2.34
YCK3YER123W ERD2P18414 219 aa0.44□□□□□ -2.34
YCK3YER123W DDR48P18899 430 aaKnown RBP0.44□□□□□ -2.34
YCK3YER123W EHD3P28817 500 aa0.44□□□□□ -2.34
YCK3YER123W MRPL28P36527 147 aa0.44□□□□□ -2.34
YCK3YER123W MAK5P38112 773 aaPredicted RBP0.44□□□□□ -2.34
YCK3YER123W ECM33P38248 429 aaKnown RBP0.44□□□□□ -2.34
YCK3YER123W YBR096WP38256 230 aa0.44□□□□□ -2.34
YCK3YER123W DOG2P38773 246 aa0.44□□□□□ -2.34
YCK3YER123W NSG1P38837 291 aa0.44□□□□□ -2.34
YCK3YER123W YHR180WP38868 163 aa0.44□□□□□ -2.34
YCK3YER123W COX15P40086 486 aa0.44□□□□□ -2.34
YCK3YER123W FMC1P40491 155 aa0.44□□□□□ -2.34
YCK3YER123W VPS55P47111 140 aa0.44□□□□□ -2.34
YCK3YER123W NCE101Q02820 53 aa0.44□□□□□ -2.34
YCK3YER123W YLR162WQ06235 118 aa0.44□□□□□ -2.34
YCK3YER123W BRX1Q08235 291 aaKnown RBP0.44□□□□□ -2.34
YCK3YER123W GRE1Q08969 168 aa0.44□□□□□ -2.34
YCK3YER123W RIO1Q12196 484 aaKnown RBP0.44□□□□□ -2.34
YCK3YER123W RRP36Q12481 300 aaPredicted RBP0.44□□□□□ -2.34
YCK3YER123W MATALPHA1P0CY06 175 aa0.43□□□□□ -2.34
YCK3YER123W HMLALPHA1P0CY07 175 aa0.43□□□□□ -2.34
YCK3YER123W CDC10P25342 322 aaKnown RBP0.43□□□□□ -2.34
YCK3YER123W FZF1P32805 299 aa0.43□□□□□ -2.34
YCK3YER123W SNC2P33328 115 aa0.43□□□□□ -2.34
YCK3YER123W TMA19P35691 167 aaKnown RBP0.43□□□□□ -2.34
YCK3YER123W MCM22P47167 239 aa0.43□□□□□ -2.34
YCK3YER123W FYV6P53913 173 aa0.43□□□□□ -2.34
YCK3YER123W PET117Q02771 107 aa0.43□□□□□ -2.34
YCK3YER123W RRN5Q02983 363 aa0.43□□□□□ -2.34
YCK3YER123W YDR248CQ03786 193 aa0.43□□□□□ -2.34
YCK3YER123W YHP1Q04116 353 aa0.43□□□□□ -2.34
YCK3YER123W LPP1Q04396 274 aa0.43□□□□□ -2.34
YCK3YER123W PRM3Q08931 133 aa0.43□□□□□ -2.34
YCK3YER123W FCY1Q12178 158 aa0.43□□□□□ -2.34
YCK3YER123W TFC1P32367 649 aa0.42□□□□□ -2.34
YCK3YER123W YBR209WP38311 105 aa0.42□□□□□ -2.34
YCK3YER123W MIC12P38341 106 aa0.42□□□□□ -2.34
YCK3YER123W MPC2P38857 129 aa0.42□□□□□ -2.34
YCK3YER123W FLX1P40464 311 aa0.42□□□□□ -2.34
YCK3YER123W PRM8P53174 237 aa0.42□□□□□ -2.34
YCK3YER123W ATG31Q12421 196 aa0.42□□□□□ -2.34
YCK3YER123W TSC3Q3E790 80 aa0.42□□□□□ -2.34
YCK3YER123W RPL28P02406 149 aaKnown RBP0.41□□□□□ -2.34
YCK3YER123W RPL27BP0C2H7 136 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms