RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C MRPL25P23369 157 aa-2.46□□□□□ -2.8
SPG3YDR504C BMH2P34730 273 aaKnown RBP-2.46□□□□□ -2.8
SPG3YDR504C RPL24BP24000 155 aaKnown RBP-2.47□□□□□ -2.8
SPG3YDR504C YBR027CP38220 110 aa-2.47□□□□□ -2.8
SPG3YDR504C MVB12P42939 101 aa-2.47□□□□□ -2.8
SPG3YDR504C APS3P47064 194 aa-2.47□□□□□ -2.8
SPG3YDR504C GPI17Q04080 534 aa-2.47□□□□□ -2.8
SPG3YDR504C MTW1P39731 289 aa-2.48□□□□□ -2.81
SPG3YDR504C VAM10Q08474 114 aa-2.48□□□□□ -2.81
SPG3YDR504C SPC25P40014 221 aa-2.49□□□□□ -2.81
SPG3YDR504C RHO1P06780 209 aaKnown RBP-2.5□□□□□ -2.81
SPG3YDR504C MRPL37P36532 105 aa-2.5□□□□□ -2.81
SPG3YDR504C RPL25P04456 142 aaKnown RBP-2.51□□□□□ -2.81
SPG3YDR504C PHO13P19881 312 aa-2.51□□□□□ -2.81
SPG3YDR504C RPO26P20435 155 aa-2.51□□□□□ -2.81
SPG3YDR504C ADO1P47143 340 aaKnown RBP-2.51□□□□□ -2.81
SPG3YDR504C DML1Q03652 475 aa-2.51□□□□□ -2.81
SPG3YDR504C ATG31Q12421 196 aa-2.51□□□□□ -2.81
SPG3YDR504C LSM7P53905 115 aaKnown RBP-2.52□□□□□ -2.81
SPG3YDR504C ATG41Q12048 136 aa-2.52□□□□□ -2.81
SPG3YDR504C GAT4P40569 121 aa-2.53□□□□□ -2.81
SPG3YDR504C AIM2P39721 246 aa-2.54□□□□□ -2.82
SPG3YDR504C HMF1P40037 129 aaKnown RBP-2.54□□□□□ -2.82
SPG3YDR504C SKI6P46948 246 aaPredicted RBP-2.54□□□□□ -2.82
SPG3YDR504C ARO80Q04052 950 aa-2.55□□□□□ -2.82
SPG3YDR504C PAM18Q07914 168 aa-2.55□□□□□ -2.82
SPG3YDR504C AUA1P32450 94 aa-2.56□□□□□ -2.82
SPG3YDR504C YOL014WQ08110 124 aa-2.56□□□□□ -2.82
SPG3YDR504C DAS2Q12084 232 aa-2.56□□□□□ -2.82
SPG3YDR504C GCN3P14741 305 aa-2.57□□□□□ -2.82
SPG3YDR504C ATX1P38636 73 aa-2.57□□□□□ -2.82
SPG3YDR504C NSG1P38837 291 aa-2.57□□□□□ -2.82
SPG3YDR504C MIC26P50087 233 aa-2.57□□□□□ -2.82
SPG3YDR504C HUG1Q6Q5K6 68 aa-2.57□□□□□ -2.82
SPG3YDR504C NTG1P31378 399 aa-2.58□□□□□ -2.82
SPG3YDR504C SSO1P32867 290 aa-2.58□□□□□ -2.82
SPG3YDR504C YNL190WP53872 204 aa-2.58□□□□□ -2.82
SPG3YDR504C BUB2P26448 306 aaPredicted RBP-2.59□□□□□ -2.82
SPG3YDR504C ATG8P38182 117 aaRIP-Chip data-2.59□□□□□ -2.82not detected
SPG3YDR504C FIP1P45976 327 aa-2.59□□□□□ -2.82
SPG3YDR504C YDR010CQ12426 110 aa-2.59□□□□□ -2.82
SPG3YDR504C CNB1P25296 175 aa-2.6□□□□□ -2.83
SPG3YDR504C YRA2P36036 203 aaKnown RBP RIP-Chip data-2.61□□□□□ -2.83not detected
SPG3YDR504C MRPL24P36525 258 aaPredicted RBP-2.61□□□□□ -2.83
SPG3YDR504C SGF11Q03067 99 aa-2.61□□□□□ -2.83
SPG3YDR504C YML100W-AQ8TGT0 57 aa-2.61□□□□□ -2.83
SPG3YDR504C RIB3Q99258 208 aa-2.61□□□□□ -2.83
SPG3YDR504C RPC17P47076 161 aa-2.62□□□□□ -2.83
SPG3YDR504C ERV25P54837 211 aaKnown RBP-2.62□□□□□ -2.83
SPG3YDR504C ATP20Q12233 115 aa-2.62□□□□□ -2.83
SPG3YDR504C BRR2P32639 2163 aaKnown RBP-2.62□□□□□ -2.83
SPG3YDR504C SEC16P48415 2195 aaKnown RBP-2.63□□□□□ -2.83
SPG3YDR504C TAF14P35189 244 aa-2.63□□□□□ -2.83
SPG3YDR504C RRT1P38192 103 aa-2.63□□□□□ -2.83
SPG3YDR504C RTC4P53850 401 aa-2.63□□□□□ -2.83
SPG3YDR504C TAF2P23255 1407 aa-2.63□□□□□ -2.83
SPG3YDR504C CDC33P07260 213 aaKnown RBP-2.64□□□□□ -2.83
SPG3YDR504C GRX5Q02784 150 aa-2.64□□□□□ -2.83
SPG3YDR504C COA6Q3E846 104 aa-2.64□□□□□ -2.83
SPG3YDR504C YPR117WQ06116 2489 aa-2.64□□□□□ -2.83
SPG3YDR504C GLC8P41818 229 aa-2.65□□□□□ -2.83
SPG3YDR504C YJL009WP47078 108 aa-2.65□□□□□ -2.83
SPG3YDR504C FUS2Q05670 677 aa-2.65□□□□□ -2.83
SPG3YDR504C LDB7P38210 180 aa-2.66□□□□□ -2.84
SPG3YDR504C NSA2P40078 261 aaKnown RBP-2.66□□□□□ -2.84
SPG3YDR504C YMR315WQ04869 349 aaKnown RBP-2.66□□□□□ -2.84
SPG3YDR504C YLR194CQ05777 254 aa-2.66□□□□□ -2.84
SPG3YDR504C YDL157CQ12082 118 aa-2.66□□□□□ -2.84
SPG3YDR504C MDM32Q12171 622 aa-2.66□□□□□ -2.84
SPG3YDR504C YOR381W-AQ3E804 55 aa-2.66□□□□□ -2.84
SPG3YDR504C YFL019CP43576 117 aa-2.67□□□□□ -2.84
SPG3YDR504C RIM9Q04734 239 aa-2.67□□□□□ -2.84
SPG3YDR504C YLR036CQ07986 203 aa-2.67□□□□□ -2.84
SPG3YDR504C RPS25BP0C0T4 108 aaKnown RBP-2.68□□□□□ -2.84
SPG3YDR504C MER1P16523 270 aa-2.68□□□□□ -2.84
SPG3YDR504C RTR1P40084 226 aaPredicted RBP-2.68□□□□□ -2.84
SPG3YDR504C COX15P40086 486 aa-2.68□□□□□ -2.84
SPG3YDR504C POR2P40478 281 aa-2.68□□□□□ -2.84
SPG3YDR504C BNA6P43619 295 aa-2.68□□□□□ -2.84
SPG3YDR504C BRX1Q08235 291 aaKnown RBP-2.68□□□□□ -2.84
SPG3YDR504C RPS25AQ3E792 108 aaPredicted RBP-2.68□□□□□ -2.84
SPG3YDR504C YCR087C-AP37263 153 aa-2.69□□□□□ -2.84
SPG3YDR504C TRM5P38793 499 aa-2.69□□□□□ -2.84
SPG3YDR504C YFR035CP43608 114 aa-2.69□□□□□ -2.84
SPG3YDR504C TDA4P47153 279 aa-2.69□□□□□ -2.84
SPG3YDR504C GEP7P53171 287 aa-2.69□□□□□ -2.84
SPG3YDR504C MBF1O14467 151 aaKnown RBP-2.7□□□□□ -2.84
SPG3YDR504C RPS24AP0CX31 135 aaKnown RBP-2.71□□□□□ -2.84
SPG3YDR504C RPS24BP0CX32 135 aaKnown RBP-2.71□□□□□ -2.84
SPG3YDR504C GCY1P14065 312 aaKnown RBP RIP-Chip data-2.71□□□□□ -2.84not detected
SPG3YDR504C RFC4P40339 323 aaKnown RBP-2.71□□□□□ -2.84
SPG3YDR504C RSF2P46974 1380 aa-2.72□□□□□ -2.84
SPG3YDR504C RPL28P02406 149 aaKnown RBP-2.72□□□□□ -2.84
SPG3YDR504C IRC18P47056 224 aa-2.72□□□□□ -2.84
SPG3YDR504C GIS3Q12418 502 aa-2.72□□□□□ -2.84
SPG3YDR504C YGR269WP40326 108 aa-2.73□□□□□ -2.85
SPG3YDR504C NRK1P53915 240 aa-2.73□□□□□ -2.85
SPG3YDR504C IRC21Q04772 201 aa-2.73□□□□□ -2.85
SPG3YDR504C HYP2P23301 157 aaKnown RBP-2.74□□□□□ -2.85
SPG3YDR504C RME1P32338 300 aaKnown RBP-2.74□□□□□ -2.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms