RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W YPR014CQ6B0W2 109 aa1.44□□□□□ -2.18
SLD5YDR489W VAR1P02381 398 aa1.43□□□□□ -2.18
SLD5YDR489W YKL102CP34249 101 aa1.43□□□□□ -2.18
SLD5YDR489W ECM4P36156 370 aa1.43□□□□□ -2.18
SLD5YDR489W EDC3P39998 551 aaKnown RBP1.43□□□□□ -2.18
SLD5YDR489W CUP9P41817 306 aa1.43□□□□□ -2.18
SLD5YDR489W RCE1Q03530 315 aa1.43□□□□□ -2.18
SLD5YDR489W HPT1Q04178 221 aaKnown RBP1.43□□□□□ -2.18
SLD5YDR489W SHH4Q06236 168 aa1.43□□□□□ -2.18
SLD5YDR489W YPR013CQ12145 317 aa1.43□□□□□ -2.18
SLD5YDR489W ATP20Q12233 115 aa1.43□□□□□ -2.18
SLD5YDR489W RPS24AP0CX31 135 aaKnown RBP1.42□□□□□ -2.18
SLD5YDR489W RPS24BP0CX32 135 aaKnown RBP1.42□□□□□ -2.18
SLD5YDR489W RPL35AP0CX84 120 aaKnown RBP1.42□□□□□ -2.18
SLD5YDR489W RPL35BP0CX85 120 aaKnown RBP1.42□□□□□ -2.18
SLD5YDR489W SEC72P39742 193 aaKnown RBP1.42□□□□□ -2.18
SLD5YDR489W YIP3P53633 176 aa1.42□□□□□ -2.18
SLD5YDR489W YLR460CP54007 376 aa1.42□□□□□ -2.18
SLD5YDR489W SLH1P53327 1967 aaKnown RBP1.41□□□□□ -2.18
SLD5YDR489W TRR1P29509 319 aaKnown RBP1.41□□□□□ -2.18
SLD5YDR489W RPB7P34087 171 aa1.41□□□□□ -2.18
SLD5YDR489W FYV4P38783 130 aaPredicted RBP1.41□□□□□ -2.18
SLD5YDR489W YEL008WP40001 126 aa1.41□□□□□ -2.18
SLD5YDR489W NSA2P40078 261 aaKnown RBP1.41□□□□□ -2.18
SLD5YDR489W SOL1P50278 321 aa1.41□□□□□ -2.18
SLD5YDR489W DIG2Q03373 323 aaKnown RBP1.41□□□□□ -2.18
SLD5YDR489W FYV12Q08559 129 aa1.41□□□□□ -2.18
SLD5YDR489W DAS2Q12084 232 aa1.41□□□□□ -2.18
SLD5YDR489W RAD51P25454 400 aa1.4□□□□□ -2.19
SLD5YDR489W SFK1P35735 353 aa1.4□□□□□ -2.19
SLD5YDR489W ALB1P47019 175 aaPredicted RBP1.4□□□□□ -2.19
SLD5YDR489W GAL83Q04739 417 aa1.4□□□□□ -2.19
SLD5YDR489W NSP1P14907 823 aaKnown RBP1.39□□□□□ -2.19
SLD5YDR489W SEN2P16658 377 aa1.39□□□□□ -2.19
SLD5YDR489W RRT1P38192 103 aa1.39□□□□□ -2.19
SLD5YDR489W RFC2P40348 353 aa1.39□□□□□ -2.19
SLD5YDR489W YNL140CP53910 189 aa1.39□□□□□ -2.19
SLD5YDR489W YOR015WQ12169 119 aa1.39□□□□□ -2.19
SLD5YDR489W YOR381W-AQ3E804 55 aa1.39□□□□□ -2.19
SLD5YDR489W DUR1,2P32528 1835 aaKnown RBP1.38□□□□□ -2.19
SLD5YDR489W YCR023CP25351 611 aa1.38□□□□□ -2.19
SLD5YDR489W GSP2P32836 220 aaKnown RBP1.38□□□□□ -2.19
SLD5YDR489W CPR5P35176 225 aa1.38□□□□□ -2.19
SLD5YDR489W YEL067CP39978 195 aa1.38□□□□□ -2.19
SLD5YDR489W MPM1P40364 252 aa1.38□□□□□ -2.19
SLD5YDR489W NSE4P43124 402 aa1.38□□□□□ -2.19
SLD5YDR489W TTI2P47168 421 aa1.38□□□□□ -2.19
SLD5YDR489W YLR050CQ12155 161 aaKnown RBP1.38□□□□□ -2.19
SLD5YDR489W SEC14P24280 304 aaKnown RBP1.37□□□□□ -2.19
SLD5YDR489W RRP17Q04031 235 aaPredicted RBP1.37□□□□□ -2.19
SLD5YDR489W UPS1Q05776 175 aa1.37□□□□□ -2.19
SLD5YDR489W YPR127WQ06494 345 aa1.37□□□□□ -2.19
SLD5YDR489W COA3Q3E7B2 85 aa1.37□□□□□ -2.19
SLD5YDR489W SAC3P46674 1301 aa1.37□□□□□ -2.19
SLD5YDR489W STP22P25604 385 aa1.36□□□□□ -2.19
SLD5YDR489W HSK3P69852 69 aa1.36□□□□□ -2.19
SLD5YDR489W DML1Q03652 475 aa1.36□□□□□ -2.19
SLD5YDR489W YHP1Q04116 353 aa1.36□□□□□ -2.19
SLD5YDR489W GIM5Q04493 163 aa1.36□□□□□ -2.19
SLD5YDR489W YHR212W-AP0CX91 67 aa1.35□□□□□ -2.19
SLD5YDR489W YCL042WP25572 119 aa1.35□□□□□ -2.19
SLD5YDR489W SRP14P38985 146 aa1.35□□□□□ -2.19
SLD5YDR489W PEX11Q12462 236 aa1.35□□□□□ -2.19
SLD5YDR489W TAR1Q8TGM6 124 aa1.35□□□□□ -2.19
SLD5YDR489W MAK31P23059 88 aa1.34□□□□□ -2.19
SLD5YDR489W SOK1P40317 901 aa1.34□□□□□ -2.19
SLD5YDR489W XPT1P47165 209 aa1.34□□□□□ -2.19
SLD5YDR489W SBH1P52870 82 aa1.34□□□□□ -2.19
SLD5YDR489W UPS3Q04006 179 aa1.34□□□□□ -2.19
SLD5YDR489W YDR391CQ04170 232 aa1.34□□□□□ -2.19
SLD5YDR489W YOR214CQ12282 236 aa1.34□□□□□ -2.19
SLD5YDR489W STF2P16965 84 aa1.33□□□□□ -2.2
SLD5YDR489W HSP30P25619 332 aa1.33□□□□□ -2.2
SLD5YDR489W NUF2P33895 451 aa1.33□□□□□ -2.2
SLD5YDR489W ETR1P38071 380 aa1.33□□□□□ -2.2
SLD5YDR489W CSH1P38287 376 aa1.33□□□□□ -2.2
SLD5YDR489W PAC10P48363 199 aa1.33□□□□□ -2.2
SLD5YDR489W YKR005CQ02203 525 aa1.33□□□□□ -2.2
SLD5YDR489W PIR1Q03178 341 aa1.33□□□□□ -2.2
SLD5YDR489W RIM9Q04734 239 aa1.33□□□□□ -2.2
SLD5YDR489W ELP6Q04868 273 aa1.33□□□□□ -2.2
SLD5YDR489W YBL010CP32788 280 aa1.32□□□□□ -2.2
SLD5YDR489W YRA2P36036 203 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SLD5YDR489W YER121WP40076 114 aa1.32□□□□□ -2.2
SLD5YDR489W YGL235WP53071 178 aa1.32□□□□□ -2.2
SLD5YDR489W ATG41Q12048 136 aa1.32□□□□□ -2.2
SLD5YDR489W RIF1P29539 1916 aa1.32□□□□□ -2.2
SLD5YDR489W UBC8P28263 218 aa1.31□□□□□ -2.2
SLD5YDR489W YBR242WP38331 238 aa1.31□□□□□ -2.2
SLD5YDR489W CCS1P40202 249 aaKnown RBP1.31□□□□□ -2.2
SLD5YDR489W VPS28Q02767 242 aa1.31□□□□□ -2.2
SLD5YDR489W THI74Q04083 370 aa1.31□□□□□ -2.2
SLD5YDR489W YMR030W-AQ3E760 96 aa1.31□□□□□ -2.2
SLD5YDR489W CMC2Q3E7A4 109 aa1.31□□□□□ -2.2
SLD5YDR489W VPS51P36116 164 aa1.3□□□□□ -2.2
SLD5YDR489W MRPL15P36523 253 aa1.3□□□□□ -2.2
SLD5YDR489W YPR203WQ08994 102 aa1.3□□□□□ -2.2
SLD5YDR489W CMD1P06787 147 aaKnown RBP1.29□□□□□ -2.2
SLD5YDR489W YEL073CP39974 107 aa1.29□□□□□ -2.2
SLD5YDR489W GLR1P41921 483 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms