RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B YKL183C-AQ3E765 70 aa-0.74□□□□□ -2.53
HTL1YCR020W-B NTG1P31378 399 aa-0.75□□□□□ -2.53
HTL1YCR020W-B ASF2P32448 525 aaPredicted RBP-0.75□□□□□ -2.53
HTL1YCR020W-B YCR087C-AP37263 153 aa-0.75□□□□□ -2.53
HTL1YCR020W-B ERG28P40030 148 aa-0.75□□□□□ -2.53
HTL1YCR020W-B YNL194CP40169 301 aa-0.75□□□□□ -2.53
HTL1YCR020W-B CCS1P40202 249 aaKnown RBP-0.75□□□□□ -2.53
HTL1YCR020W-B SBH1P52870 82 aa-0.75□□□□□ -2.53
HTL1YCR020W-B YGL230CP53074 147 aa-0.75□□□□□ -2.53
HTL1YCR020W-B ATG41Q12048 136 aa-0.75□□□□□ -2.53
HTL1YCR020W-B YDR157WA0A023PZE8 133 aa-0.76□□□□□ -2.53
HTL1YCR020W-B TAO3P40468 2376 aa-0.77□□□□□ -2.53
HTL1YCR020W-B KIN28P06242 306 aa-0.77□□□□□ -2.53
HTL1YCR020W-B UBC6P33296 250 aaPredicted RBP-0.77□□□□□ -2.53
HTL1YCR020W-B CBT1P36038 271 aaPredicted RBP-0.77□□□□□ -2.53
HTL1YCR020W-B YER085CP40058 173 aa-0.77□□□□□ -2.53
HTL1YCR020W-B RPS29BP41058 56 aaKnown RBP-0.77□□□□□ -2.53
HTL1YCR020W-B DML1Q03652 475 aa-0.77□□□□□ -2.53
HTL1YCR020W-B YOR072WQ08486 104 aa-0.77□□□□□ -2.53
HTL1YCR020W-B DAS2Q12084 232 aa-0.77□□□□□ -2.53
HTL1YCR020W-B RPS22AP0C0W1 130 aaKnown RBP-0.78□□□□□ -2.53
HTL1YCR020W-B MAK31P23059 88 aa-0.78□□□□□ -2.53
HTL1YCR020W-B PRP18P33411 251 aaPredicted RBP-0.78□□□□□ -2.53
HTL1YCR020W-B TAF14P35189 244 aa-0.78□□□□□ -2.53
HTL1YCR020W-B YFL019CP43576 117 aa-0.78□□□□□ -2.53
HTL1YCR020W-B HRD1Q08109 551 aa-0.78□□□□□ -2.53
HTL1YCR020W-B RPS22BQ3E7Y3 130 aaKnown RBP-0.78□□□□□ -2.53
HTL1YCR020W-B RIF1P29539 1916 aa-0.79□□□□□ -2.54
HTL1YCR020W-B MOB1P40484 314 aa-0.79□□□□□ -2.54
HTL1YCR020W-B YLR031WQ07978 186 aa-0.79□□□□□ -2.54
HTL1YCR020W-B ATP20Q12233 115 aa-0.79□□□□□ -2.54
HTL1YCR020W-B STE18P18852 110 aa-0.8□□□□□ -2.54
HTL1YCR020W-B RRT1P38192 103 aa-0.8□□□□□ -2.54
HTL1YCR020W-B SLM6P38343 150 aa-0.8□□□□□ -2.54
HTL1YCR020W-B NSA2P40078 261 aaKnown RBP-0.8□□□□□ -2.54
HTL1YCR020W-B TDA4P47153 279 aa-0.8□□□□□ -2.54
HTL1YCR020W-B RAD17P48581 401 aa-0.8□□□□□ -2.54
HTL1YCR020W-B GRX5Q02784 150 aa-0.8□□□□□ -2.54
HTL1YCR020W-B BLM10P43583 2143 aa-0.8□□□□□ -2.54
HTL1YCR020W-B RPS24AP0CX31 135 aaKnown RBP-0.81□□□□□ -2.54
HTL1YCR020W-B RPS24BP0CX32 135 aaKnown RBP-0.81□□□□□ -2.54
HTL1YCR020W-B NHP6BP11633 99 aaKnown RBP-0.81□□□□□ -2.54
HTL1YCR020W-B YRB1P41920 201 aaKnown RBP-0.81□□□□□ -2.54
HTL1YCR020W-B SEN15Q04675 128 aa-0.81□□□□□ -2.54
HTL1YCR020W-B VAM10Q08474 114 aa-0.81□□□□□ -2.54
HTL1YCR020W-B HAP2P06774 265 aa-0.82□□□□□ -2.54
HTL1YCR020W-B CWC23P52868 283 aaPredicted RBP-0.82□□□□□ -2.54
HTL1YCR020W-B YMR315WQ04869 349 aaKnown RBP-0.82□□□□□ -2.54
HTL1YCR020W-B YOR342CQ12182 319 aa-0.82□□□□□ -2.54
HTL1YCR020W-B MRS1P07266 363 aa-0.83□□□□□ -2.54
HTL1YCR020W-B YBR027CP38220 110 aa-0.83□□□□□ -2.54
HTL1YCR020W-B HTD2P38790 280 aaKnown RBP-0.83□□□□□ -2.54
HTL1YCR020W-B RTR1P40084 226 aaPredicted RBP-0.83□□□□□ -2.54
HTL1YCR020W-B RIM9Q04734 239 aa-0.83□□□□□ -2.54
HTL1YCR020W-B GCY1P14065 312 aaKnown RBP RIP-Chip data-0.84□□□□□ -2.54not detected
HTL1YCR020W-B RFC2P40348 353 aa-0.84□□□□□ -2.54
HTL1YCR020W-B CCC1P47818 322 aa-0.84□□□□□ -2.54
HTL1YCR020W-B YDL157CQ12082 118 aa-0.84□□□□□ -2.54
HTL1YCR020W-B IKI1P38874 309 aa-0.85□□□□□ -2.55
HTL1YCR020W-B TMA22P47089 198 aaPredicted RBP-0.85□□□□□ -2.55
HTL1YCR020W-B NRK1P53915 240 aa-0.85□□□□□ -2.55
HTL1YCR020W-B GAL83Q04739 417 aa-0.85□□□□□ -2.55
HTL1YCR020W-B YOR034C-AQ3E735 80 aa-0.85□□□□□ -2.55
HTL1YCR020W-B URA2P07259 2214 aaKnown RBP-0.85□□□□□ -2.55
HTL1YCR020W-B TAF2P23255 1407 aa-0.86□□□□□ -2.55
HTL1YCR020W-B YRA2P36036 203 aaKnown RBP RIP-Chip data-0.86□□□□□ -2.55not detected
HTL1YCR020W-B APS3P47064 194 aa-0.86□□□□□ -2.55
HTL1YCR020W-B CDC33P07260 213 aaKnown RBP-0.87□□□□□ -2.55
HTL1YCR020W-B COQ1P18900 473 aa-0.87□□□□□ -2.55
HTL1YCR020W-B HSP30P25619 332 aa-0.87□□□□□ -2.55
HTL1YCR020W-B NSG1P38837 291 aa-0.87□□□□□ -2.55
HTL1YCR020W-B YOR381W-AQ3E804 55 aa-0.87□□□□□ -2.55
HTL1YCR020W-B NCB2Q92317 146 aa-0.87□□□□□ -2.55
HTL1YCR020W-B IGO2Q9P305 131 aa-0.87□□□□□ -2.55
HTL1YCR020W-B SNF2P22082 1703 aa-0.88□□□□□ -2.55
HTL1YCR020W-B RFA3P26755 122 aaKnown RBP-0.88□□□□□ -2.55
HTL1YCR020W-B GEP7P53171 287 aa-0.88□□□□□ -2.55
HTL1YCR020W-B YNL184CP53876 108 aa-0.88□□□□□ -2.55
HTL1YCR020W-B RUD3Q12234 484 aaKnown RBP-0.88□□□□□ -2.55
HTL1YCR020W-B YLR412C-AQ3E742 68 aa-0.88□□□□□ -2.55
HTL1YCR020W-B FMP23P38231 175 aa-0.89□□□□□ -2.55
HTL1YCR020W-B YHR140WP38842 239 aa-0.89□□□□□ -2.55
HTL1YCR020W-B OTU1P43558 301 aa-0.89□□□□□ -2.55
HTL1YCR020W-B VPS28Q02767 242 aa-0.89□□□□□ -2.55
HTL1YCR020W-B INO80P53115 1489 aa-0.89□□□□□ -2.55
HTL1YCR020W-B ADE1P27616 306 aa-0.9□□□□□ -2.55
HTL1YCR020W-B YGR269WP40326 108 aa-0.9□□□□□ -2.55
HTL1YCR020W-B GPI17Q04080 534 aa-0.9□□□□□ -2.55
HTL1YCR020W-B LAA1P39526 2014 aa-0.9□□□□□ -2.55
HTL1YCR020W-B RPS25BP0C0T4 108 aaKnown RBP-0.91□□□□□ -2.56
HTL1YCR020W-B MMS2P53152 137 aa-0.91□□□□□ -2.56
HTL1YCR020W-B YML079WQ03629 201 aa-0.91□□□□□ -2.56
HTL1YCR020W-B RPS25AQ3E792 108 aaPredicted RBP-0.91□□□□□ -2.56
HTL1YCR020W-B YPR014CQ6B0W2 109 aa-0.91□□□□□ -2.56
HTL1YCR020W-B CPR5P35176 225 aa-0.92□□□□□ -2.56
HTL1YCR020W-B RTC4P53850 401 aa-0.92□□□□□ -2.56
HTL1YCR020W-B HTB1P02293 131 aaKnown RBP-0.93□□□□□ -2.56
HTL1YCR020W-B HTB2P02294 131 aa-0.93□□□□□ -2.56
HTL1YCR020W-B PGA1P53896 198 aa-0.93□□□□□ -2.56
HTL1YCR020W-B YEL014CP39999 101 aa-0.94□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms