RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 YBR242WP38331 238 aa0.38□□□□□ -2.35
snR78snR78 SFK1P35735 353 aa0.37□□□□□ -2.35
snR78snR78 ERG10P41338 398 aaKnown RBP0.37□□□□□ -2.35
snR78snR78 YFL051CP43552 160 aa0.37□□□□□ -2.35
snR78snR78 YMR099CQ03161 297 aaKnown RBP0.37□□□□□ -2.35
snR78snR78 PHO85P17157 305 aa0.35□□□□□ -2.35
snR78snR78 ERG28P40030 148 aa0.35□□□□□ -2.35
snR78snR78 DYN3Q04949 312 aa0.35□□□□□ -2.35
snR78snR78 BMH2P34730 273 aaKnown RBP0.34□□□□□ -2.36
snR78snR78 AIM2P39721 246 aa0.34□□□□□ -2.36
snR78snR78 SHH3Q04487 196 aa0.34□□□□□ -2.36
snR78snR78 CCW12Q12127 133 aa0.34□□□□□ -2.36
snR78snR78 SEN2P16658 377 aa0.33□□□□□ -2.36
snR78snR78 GSP2P32836 220 aaKnown RBP0.33□□□□□ -2.36
snR78snR78 YRB1P41920 201 aaKnown RBP0.33□□□□□ -2.36
snR78snR78 YAR023CD6VPM8 179 aa0.32□□□□□ -2.36
snR78snR78 YPK2P18961 677 aa0.32□□□□□ -2.36
snR78snR78 YAR064WP39563 99 aa0.32□□□□□ -2.36
snR78snR78 YNL194CP40169 301 aa0.32□□□□□ -2.36
snR78snR78 SPS18P32572 300 aa0.31□□□□□ -2.36
snR78snR78 PAM17P36147 197 aa0.31□□□□□ -2.36
snR78snR78 YER134CP40081 178 aa0.31□□□□□ -2.36
snR78snR78 SER2P42941 309 aa0.31□□□□□ -2.36
snR78snR78 FYV12Q08559 129 aa0.31□□□□□ -2.36
snR78snR78 YDR157WA0A023PZE8 133 aa0.3□□□□□ -2.36
snR78snR78 NHP6BP11633 99 aaKnown RBP0.3□□□□□ -2.36
snR78snR78 TAR1Q8TGM6 124 aa0.3□□□□□ -2.36
snR78snR78 CBT1P36038 271 aaPredicted RBP0.29□□□□□ -2.36
snR78snR78 YNL033WP53964 284 aa0.29□□□□□ -2.36
snR78snR78 FIT1Q04433 528 aa0.29□□□□□ -2.36
snR78snR78 FUS2Q05670 677 aa0.29□□□□□ -2.36
snR78snR78 SED1Q01589 338 aa0.28□□□□□ -2.36
snR78snR78 VPS71Q03433 280 aa0.28□□□□□ -2.36
snR78snR78 GGA1Q06336 557 aa0.28□□□□□ -2.36
snR78snR78 STE18P18852 110 aa0.27□□□□□ -2.37
snR78snR78 MAK5P38112 773 aaPredicted RBP0.27□□□□□ -2.37
snR78snR78 ARP3P47117 449 aaKnown RBP0.27□□□□□ -2.37
snR78snR78 RAD17P48581 401 aa0.27□□□□□ -2.37
snR78snR78 NOP19P53317 196 aaPredicted RBP0.27□□□□□ -2.37
snR78snR78 CNB1P25296 175 aa0.26□□□□□ -2.37
snR78snR78 YCR087C-AP37263 153 aa0.26□□□□□ -2.37
snR78snR78 MTW1P39731 289 aa0.26□□□□□ -2.37
snR78snR78 DCV1P43595 202 aa0.26□□□□□ -2.37
snR78snR78 YOL014WQ08110 124 aa0.26□□□□□ -2.37
snR78snR78 ABP140Q08641 628 aaKnown RBP0.26□□□□□ -2.37
snR78snR78 SKI6P46948 246 aaPredicted RBP0.25□□□□□ -2.37
snR78snR78 GET4Q12125 312 aa0.25□□□□□ -2.37
snR78snR78 NCB2Q92317 146 aa0.25□□□□□ -2.37
snR78snR78 RTR1P40084 226 aaPredicted RBP0.24□□□□□ -2.37
snR78snR78 CUP9P41817 306 aa0.24□□□□□ -2.37
snR78snR78 YMR253CQ04835 414 aa0.24□□□□□ -2.37
snR78snR78 MBF1O14467 151 aaKnown RBP0.23□□□□□ -2.37
snR78snR78 TIR1P10863 254 aa0.23□□□□□ -2.37
snR78snR78 YCR023CP25351 611 aa0.23□□□□□ -2.37
snR78snR78 MGT1P26188 188 aa0.23□□□□□ -2.37
snR78snR78 PRP18P33411 251 aaPredicted RBP0.23□□□□□ -2.37
snR78snR78 OTU1P43558 301 aa0.23□□□□□ -2.37
snR78snR78 CWC23P52868 283 aaPredicted RBP0.22□□□□□ -2.37
snR78snR78 RRP17Q04031 235 aaPredicted RBP0.22□□□□□ -2.37
snR78snR78 ADF1Q2V2Q1 113 aa0.22□□□□□ -2.37
snR78snR78 YML100W-AQ8TGT0 57 aa0.22□□□□□ -2.37
snR78snR78 SNF4P12904 322 aa0.21□□□□□ -2.38
snR78snR78 PST2Q12335 198 aaKnown RBP0.21□□□□□ -2.38
snR78snR78 HFA1P32874 2273 aa0.21□□□□□ -2.38
snR78snR78 STF2P16965 84 aa0.2□□□□□ -2.38
snR78snR78 COQ1P18900 473 aa0.2□□□□□ -2.38
snR78snR78 SBH2P52871 88 aa0.2□□□□□ -2.38
snR78snR78 YGL235WP53071 178 aa0.2□□□□□ -2.38
snR78snR78 IDP1P21954 428 aaKnown RBP0.18□□□□□ -2.38
snR78snR78 CDC33P07260 213 aaKnown RBP0.17□□□□□ -2.38
snR78snR78 IKI1P38874 309 aa0.17□□□□□ -2.38
snR78snR78 SPC25P40014 221 aa0.17□□□□□ -2.38
snR78snR78 NAT3Q06504 195 aa0.17□□□□□ -2.38
snR78snR78 YLR036CQ07986 203 aa0.17□□□□□ -2.38
snR78snR78 PDS1P40316 373 aaPredicted RBP0.16□□□□□ -2.38
snR78snR78 RFC4P40339 323 aaKnown RBP0.16□□□□□ -2.38
snR78snR78 YJR015WP47090 510 aa0.16□□□□□ -2.38
snR78snR78 YBL010CP32788 280 aa0.15□□□□□ -2.39
snR78snR78 ETR1P38071 380 aa0.15□□□□□ -2.39
snR78snR78 ELP6Q04868 273 aa0.15□□□□□ -2.39
snR78snR78 TAF14P35189 244 aa0.14□□□□□ -2.39
snR78snR78 YJR111CP47148 283 aaKnown RBP0.14□□□□□ -2.39
snR78snR78 YLR031WQ07978 186 aa0.14□□□□□ -2.39
snR78snR78 MPM1P40364 252 aa0.13□□□□□ -2.39
snR78snR78 GCN20P43535 752 aaKnown RBP0.13□□□□□ -2.39
snR78snR78 PIR1Q03178 341 aa0.13□□□□□ -2.39
snR78snR78 ASF2P32448 525 aaPredicted RBP0.12□□□□□ -2.39
snR78snR78 YOR015WQ12169 119 aa0.12□□□□□ -2.39
snR78snR78 DGK1Q12382 290 aa0.11□□□□□ -2.39
snR78snR78 DUR1,2P32528 1835 aaKnown RBP0.1□□□□□ -2.39
snR78snR78 TDA4P47153 279 aa0.1□□□□□ -2.39
snR78snR78 TMA23Q03525 211 aa0.1□□□□□ -2.39
snR78snR78 MRS1P07266 363 aa0.09□□□□□ -2.4
snR78snR78 RFA3P26755 122 aaKnown RBP0.09□□□□□ -2.4
snR78snR78 GPI14P47088 403 aaKnown RBP0.09□□□□□ -2.4
snR78snR78 YMR315WQ04869 349 aaKnown RBP0.09□□□□□ -2.4
snR78snR78 YDC1Q02896 317 aa0.08□□□□□ -2.4
snR78snR78 YMR030W-AQ3E760 96 aa0.08□□□□□ -2.4
snR78snR78 MSS2P40990 351 aa0.07□□□□□ -2.4
snR78snR78 PRM3Q08931 133 aa0.07□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms