RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 RPL24AP04449 155 aaKnown RBP-1.03□□□□□ -2.57
snR50snR50 RPB3P16370 318 aaKnown RBP-1.03□□□□□ -2.57
snR50snR50 RPL24BP24000 155 aaKnown RBP-1.03□□□□□ -2.57
snR50snR50 TCA17P32613 152 aa-1.03□□□□□ -2.57
snR50snR50 NSG1P38837 291 aa-1.03□□□□□ -2.57
snR50snR50 MCM22P47167 239 aa-1.03□□□□□ -2.57
snR50snR50 OST6Q03723 332 aa-1.03□□□□□ -2.57
snR50snR50 SHH3Q04487 196 aa-1.03□□□□□ -2.57
snR50snR50 ERV41Q04651 352 aa-1.03□□□□□ -2.57
snR50snR50 CSM4Q08955 156 aa-1.03□□□□□ -2.57
snR50snR50 DGK1Q12382 290 aa-1.03□□□□□ -2.57
snR50snR50 CDC33P07260 213 aaKnown RBP-1.04□□□□□ -2.58
snR50snR50 KSS1P14681 368 aa-1.04□□□□□ -2.58
snR50snR50 CUP9P41817 306 aa-1.04□□□□□ -2.58
snR50snR50 YJR149WP47177 404 aa-1.04□□□□□ -2.58
snR50snR50 YNL033WP53964 284 aa-1.04□□□□□ -2.58
snR50snR50 YHP1Q04116 353 aa-1.04□□□□□ -2.58
snR50snR50 CDC123Q05791 360 aa-1.04□□□□□ -2.58
snR50snR50 GGA1Q06336 557 aa-1.04□□□□□ -2.58
snR50snR50 YOR015WQ12169 119 aa-1.04□□□□□ -2.58
snR50snR50 HUG1Q6Q5K6 68 aa-1.04□□□□□ -2.58
snR50snR50 TCP1P12612 559 aaKnown RBP-1.05□□□□□ -2.58
snR50snR50 RMD6P39975 231 aa-1.05□□□□□ -2.58
snR50snR50 PDS1P40316 373 aaPredicted RBP-1.05□□□□□ -2.58
snR50snR50 DYN3Q04949 312 aa-1.05□□□□□ -2.58
snR50snR50 ADF1Q2V2Q1 113 aa-1.05□□□□□ -2.58
snR50snR50 COA6Q3E846 104 aa-1.05□□□□□ -2.58
snR50snR50 RIB3Q99258 208 aa-1.05□□□□□ -2.58
snR50snR50 FAS1P07149 2051 aaKnown RBP-1.06□□□□□ -2.58
snR50snR50 CKS1P20486 150 aaKnown RBP-1.06□□□□□ -2.58
snR50snR50 MRPL24P36525 258 aaPredicted RBP-1.06□□□□□ -2.58
snR50snR50 ATG8P38182 117 aaRIP-Chip data-1.06□□□□□ -2.58not detected
snR50snR50 YBR027CP38220 110 aa-1.06□□□□□ -2.58
snR50snR50 NSE4P43124 402 aa-1.06□□□□□ -2.58
snR50snR50 FAR7P43592 221 aa-1.06□□□□□ -2.58
snR50snR50 ADO1P47143 340 aaKnown RBP-1.06□□□□□ -2.58
snR50snR50 HHT1P61830 136 aa-1.06□□□□□ -2.58
snR50snR50 YDR209CQ03480 137 aa-1.06□□□□□ -2.58
snR50snR50 VAM10Q08474 114 aa-1.06□□□□□ -2.58
snR50snR50 YOL107WQ12239 342 aa-1.06□□□□□ -2.58
snR50snR50 YLR126CQ12288 251 aa-1.06□□□□□ -2.58
snR50snR50 GSC2P40989 1895 aa-1.06□□□□□ -2.58
snR50snR50 FAS2P19097 1887 aaKnown RBP-1.07□□□□□ -2.58
snR50snR50 COX2P00410 251 aa-1.07□□□□□ -2.58
snR50snR50 RHO1P06780 209 aaKnown RBP-1.07□□□□□ -2.58
snR50snR50 MRP1P10662 321 aaKnown RBP-1.07□□□□□ -2.58
snR50snR50 SNF4P12904 322 aa-1.07□□□□□ -2.58
snR50snR50 PTM1P32857 523 aa-1.07□□□□□ -2.58
snR50snR50 PET100P38958 111 aa-1.07□□□□□ -2.58
snR50snR50 OSW5P40219 148 aa-1.07□□□□□ -2.58
snR50snR50 YAR1P46683 200 aa-1.07□□□□□ -2.58
snR50snR50 YGR050CP53231 118 aa-1.07□□□□□ -2.58
snR50snR50 FMP16Q12497 93 aa-1.07□□□□□ -2.58
snR50snR50 MYO1P08964 1928 aa-1.07□□□□□ -2.58
snR50snR50 DRS2P39524 1355 aa-1.08□□□□□ -2.58
snR50snR50 SPT3P06844 337 aa-1.08□□□□□ -2.58
snR50snR50 YCR090CP25654 182 aaKnown RBP-1.08□□□□□ -2.58
snR50snR50 BUB2P26448 306 aaPredicted RBP-1.08□□□□□ -2.58
snR50snR50 SWE1P32944 819 aa-1.08□□□□□ -2.58
snR50snR50 ATX1P38636 73 aa-1.08□□□□□ -2.58
snR50snR50 YER134CP40081 178 aa-1.08□□□□□ -2.58
snR50snR50 YJL009WP47078 108 aa-1.08□□□□□ -2.58
snR50snR50 GPI14P47088 403 aaKnown RBP-1.08□□□□□ -2.58
snR50snR50 HNT1Q04344 158 aaKnown RBP-1.08□□□□□ -2.58
snR50snR50 YNG1Q08465 219 aa-1.08□□□□□ -2.58
snR50snR50 IGO2Q9P305 131 aa-1.08□□□□□ -2.58
snR50snR50 SSK22P25390 1331 aaPredicted RBP-1.09□□□□□ -2.58
snR50snR50 RPL25P04456 142 aaKnown RBP-1.09□□□□□ -2.58
snR50snR50 BCY1P07278 416 aaKnown RBP-1.09□□□□□ -2.58
snR50snR50 TIR1P10863 254 aa-1.09□□□□□ -2.58
snR50snR50 IDP1P21954 428 aaKnown RBP-1.09□□□□□ -2.58
snR50snR50 YRA2P36036 203 aaKnown RBP RIP-Chip data-1.09□□□□□ -2.58not detected
snR50snR50 POR2P40478 281 aa-1.09□□□□□ -2.58
snR50snR50 GLC8P41818 229 aa-1.09□□□□□ -2.58
snR50snR50 NSA1P53136 463 aaPredicted RBP-1.09□□□□□ -2.58
snR50snR50 MRPL50P53724 139 aa-1.09□□□□□ -2.58
snR50snR50 DML1Q03652 475 aa-1.09□□□□□ -2.58
snR50snR50 AVO2Q04749 426 aa-1.09□□□□□ -2.58
snR50snR50 BNI1P41832 1953 aa-1.09□□□□□ -2.58
snR50snR50 URA2P07259 2214 aaKnown RBP-1.09□□□□□ -2.58
snR50snR50 SEC4P07560 215 aaKnown RBP-1.1□□□□□ -2.59
snR50snR50 MAG1P22134 296 aaKnown RBP-1.1□□□□□ -2.59
snR50snR50 MGT1P26188 188 aa-1.1□□□□□ -2.59
snR50snR50 AUA1P32450 94 aa-1.1□□□□□ -2.59
snR50snR50 RTR1P40084 226 aaPredicted RBP-1.1□□□□□ -2.59
snR50snR50 FIP1P45976 327 aa-1.1□□□□□ -2.59
snR50snR50 PNC1P53184 216 aaKnown RBP-1.1□□□□□ -2.59
snR50snR50 RTC4P53850 401 aa-1.1□□□□□ -2.59
snR50snR50 YNL134CP53912 376 aaKnown RBP-1.1□□□□□ -2.59
snR50snR50 COG5P53951 403 aa-1.1□□□□□ -2.59
snR50snR50 GRX5Q02784 150 aa-1.1□□□□□ -2.59
snR50snR50 PIR1Q03178 341 aa-1.1□□□□□ -2.59
snR50snR50 RCF1Q03713 159 aa-1.1□□□□□ -2.59
snR50snR50 ARO80Q04052 950 aa-1.1□□□□□ -2.59
snR50snR50 IRC21Q04772 201 aa-1.1□□□□□ -2.59
snR50snR50 YMR253CQ04835 414 aa-1.1□□□□□ -2.59
snR50snR50 ATG31Q12421 196 aa-1.1□□□□□ -2.59
snR50snR50 YDR010CQ12426 110 aa-1.1□□□□□ -2.59
snR50snR50 MTW1P39731 289 aa-1.11□□□□□ -2.59
snR50snR50 SPC25P40014 221 aa-1.11□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms