RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	UPS1	Q05776	175 aa		5.9	□□□□□ -1.46
SNT309	YPR101W	HRD1	Q08109	551 aa		5.9	□□□□□ -1.46
SNT309	YPR101W	YBR255C-A	Q3E776	120 aa		5.9	□□□□□ -1.46
SNT309	YPR101W	ATG40	Q99325	256 aa		5.9	□□□□□ -1.46
SNT309	YPR101W	BRR2	P32639	2163 aa	Known RBP	5.9	□□□□□ -1.47
SNT309	YPR101W	CBP6	P07253	162 aa	Predicted RBP	5.89	□□□□□ -1.47
SNT309	YPR101W	FUN14	P18411	198 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YKL107W	P34251	309 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YGR269W	P40326	108 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YGR149W	P48236	432 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	OST3	P48439	350 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YGR050C	P53231	118 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	LST7	P53237	242 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	MRPL19	P53875	158 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	DAL4	Q04895	635 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YML053C	Q04978	212 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	AKR2	Q12013	749 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	MPD1	Q12404	318 aa	Known RBP	5.89	□□□□□ -1.47
SNT309	YPR101W	LAS17	Q12446	633 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YIL134C-A	Q45U18	67 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YPR053C	Q6Q5F3	151 aa		5.89	□□□□□ -1.47
SNT309	YPR101W	YPT1	P01123	206 aa	Known RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	RPS22A	P0C0W1	130 aa	Known RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	COQ3	P27680	312 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	IMP1	P28627	190 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	CPR5	P35176	225 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	MRPL11	P36521	249 aa	Predicted RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	RTC3	P38804	111 aa	Predicted RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	YIL169C	P40442	995 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	LOC1	P43586	204 aa	Predicted RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	NUP42	P49686	430 aa	Known RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	YNR040W	P53736	256 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	HCH1	P53834	153 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	YVH1	Q02256	364 aa	Known RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	ATC1	Q04005	294 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	RIM9	Q04734	239 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	FRQ1	Q06389	190 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	STP4	Q07351	490 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	YFH1	Q07540	174 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	ATX2	Q12067	313 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	SWT1	Q12104	458 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	FYV7	Q12247	151 aa		5.88	□□□□□ -1.47
SNT309	YPR101W	BEM2	P39960	2167 aa	Known RBP	5.88	□□□□□ -1.47
SNT309	YPR101W	CDC39	P25655	2108 aa	Known RBP	5.87	□□□□□ -1.47
SNT309	YPR101W	POL2	P21951	2222 aa	Known RBP	5.87	□□□□□ -1.47
SNT309	YPR101W	FMP49	A0A023PZB3	126 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	URA5	P13298	226 aa	Known RBP	5.87	□□□□□ -1.47
SNT309	YPR101W	YBL059W	P34224	193 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	QDR3	P38227	689 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	PCL7	P40186	285 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	GPI2	P46961	280 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	DAD3	P69850	94 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	MRP51	Q02950	344 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	YPR098C	Q06089	161 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	TMA10	Q06177	86 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	YOL118C	Q08259	102 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	YPR071W	Q12346	211 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	ERG27	Q12452	347 aa	Known RBP	5.87	□□□□□ -1.47
SNT309	YPR101W	YOR192C-C	Q3E736	78 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	BOL1	Q3E793	110 aa		5.87	□□□□□ -1.47
SNT309	YPR101W	GLT1	Q12680	2145 aa	Known RBP	5.87	□□□□□ -1.47
SNT309	YPR101W	BLM10	P43583	2143 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	RPL7A	P05737	244 aa	Known RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	ILV5	P06168	395 aa	Known RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	MSI1	P13712	422 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	FCY2	P17064	533 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	MIA40	P36046	403 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	YEL057C	P39983	233 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	PIG2	P40187	538 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	OST1	P41543	476 aa	Known RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	ECO1	P43605	281 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	ELA1	P53861	379 aa	Predicted RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	MHR1	Q06630	226 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	RPL7B	Q12213	244 aa	Known RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	YDL180W	Q12301	547 aa		5.86	□□□□□ -1.47
SNT309	YPR101W	PAA1	Q12447	191 aa	Known RBP	5.86	□□□□□ -1.47
SNT309	YPR101W	ATP5	P09457	212 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	RPS25B	P0C0T4	108 aa	Known RBP	5.85	□□□□□ -1.47
SNT309	YPR101W	MRPL39	P36533	70 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	YHR138C	P38841	114 aa	Predicted RBP	5.85	□□□□□ -1.47
SNT309	YPR101W	PSD1	P39006	500 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	CYB5	P40312	120 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	EGT2	P42835	1041 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	PRY1	P47032	299 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	YIP5	P53108	310 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	YAP6	Q03935	383 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	NCE102	Q12207	173 aa	RIP-Chip data	5.85	□□□□□ -1.47	not detected
SNT309	YPR101W	YPS3	Q12303	508 aa		5.85	□□□□□ -1.47
SNT309	YPR101W	RPS25A	Q3E792	108 aa	Predicted RBP	5.85	□□□□□ -1.47
SNT309	YPR101W	ROX3	P25046	220 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	YGL010W	P25338	174 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	UTH1	P36135	365 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	PIC2	P40035	300 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	HIT1	P46973	164 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	ARP3	P47117	449 aa	Known RBP	5.84	□□□□□ -1.47
SNT309	YPR101W	TAF4	P50105	388 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	CRH1	P53301	507 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	YPL067C	Q02754	198 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	RCE1	Q03530	315 aa		5.84	□□□□□ -1.47
SNT309	YPR101W	YMR007W	Q03675	126 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms